RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 PEAR1Q5VY43 1037 aaPredicted RBP0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 CEP135Q66GS9 1140 aa0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 MSL1Q68DK7 614 aa0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 DHX32Q7L7V1 743 aaKnown RBP0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 FMR1NBQ8N0W7 255 aaPredicted RBP0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 PGBD3Q8N328 593 aa0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ELOA3Q8NG57 546 aa0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 EPS8L3Q8TE67 593 aaKnown RBP0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 FBLIM1Q8WUP2 373 aa0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 EDEM1Q92611 657 aa0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 GPKOWQ92917 476 aaPredicted RBP eCLIP0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 PLD4Q96BZ4 506 aa0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 NUDT16Q96DE0 195 aaKnown RBP0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 CALR3Q96L12 384 aaKnown RBP0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 MFSD14AQ96MC6 490 aa0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 TRERF1Q96PN7 1200 aa0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 TRIM56Q9BRZ2 755 aaKnown RBP0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 FOXP3Q9BZS1 431 aa0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 GOPCQ9HD26 462 aa0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 USP21Q9UK80 565 aa0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ATXN7L1Q9ULK2 861 aaPredicted RBP0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 POLIQ9UNA4 740 aa0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 PLA2G2DQ9UNK4 145 aa0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 MINPP1Q9UNW1 487 aa0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 NOVA2Q9UNW9 492 aaKnown RBP0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 NOD1Q9Y239 953 aa0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 GTF3C5Q9Y5Q8 519 aaPredicted RBP0.88□□□□□ -2.27
RNU6-1049P-201ENST00000516414 SCO2A0A1W2PP80 73 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 PRR33A8MZF0 331 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 F8W735 103 aaPredicted RBP0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 H7C1W4 665 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 FZD6O60353 706 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 LRRN2O75325 713 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 RGS9O75916 674 aaPredicted RBP0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 F13BP05160 661 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 RARAP10276 462 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ARAFP10398 606 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 EIF2AK2P19525 551 aaKnown RBP0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 TRHRP34981 398 aaPredicted RBP0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 PREPP48147 710 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ERVFC1P60507 584 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 EIF4G2P78344 907 aaKnown RBP eCLIP0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 TRIM28Q13263 835 aaKnown RBP0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 CCINQ13939 588 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 EML3Q32P44 896 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 C8orf34Q49A92 452 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 EFHC2Q5JST6 749 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ZNF648Q5T619 568 aaPredicted RBP0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 PDZRN4Q6ZMN7 1036 aaPredicted RBP0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 VN1R5Q7Z5H4 357 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 PROSER2Q86WR7 435 aaPredicted RBP0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 SEPT12Q8IYM1 358 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 CCDC82Q8N4S0 544 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 CEP120Q8N960 986 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 GTF3C2Q8WUA4 911 aaPredicted RBP0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 SCARF2Q96GP6 870 aaPredicted RBP0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 FAM161BQ96MY7 647 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 KRTAP4-2Q9BYR5 136 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ESF1Q9H501 851 aaKnown RBP0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 VRTNQ9H8Y1 702 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ADAMTS6Q9UKP5 1117 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 MKL2Q9ULH7 1088 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 PPP1R9AQ9ULJ8 1098 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 GJA3Q9Y6H8 435 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 CARMIL2Q6F5E8 1435 aa0.87□□□□□ -2.27
RNU6-1049P-201ENST00000516414 MEGF11A6BM72 1044 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ADARB2-AS1A8MUL3 147 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 WDR64B1ANS9 1081 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 UBAP1LF5GYI3 381 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 GNB5O14775 395 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 SIN3BO75182 1162 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ABL1P00519 1130 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 IGHA2P01877 340 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 PSAPP07602 524 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 NFICP08651 508 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 FAM157BP0CG42 384 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 GLB1P16278 677 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 TAL1P17542 331 aaPredicted RBP0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 SDHBP21912 280 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ADH6P28332 368 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ZAP70P43403 619 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 EIF1AXP47813 144 aaKnown RBP0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 SEC13P55735 322 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 CDK5R2Q13319 367 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 VMACQ2NL98 169 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 C11orf91Q3C1V1 193 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ARTNQ5T4W7 220 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 RNF20Q5VTR2 975 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 FAM117BQ6P1L5 589 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ELMSAN1Q6PJG2 1045 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 POTEAQ6S8J7 498 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ZPBP2Q6X784 338 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 SLC51AQ86UW1 340 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 NLRP8Q86W28 1048 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 C12orf40Q86WS4 652 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 FBXO11Q86XK2 927 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 IRF2BP1Q8IU81 584 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ZDHHC13Q8IUH4 622 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 ABI1Q8IZP0 508 aa0.86□□□□□ -2.27
RNU6-1049P-201ENST00000516414 SIX5Q8N196 739 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms