RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 GPR101Q96P66 508 aaPredicted RBP17.41■□□□□ 0.38
TCOF1-215ENST00000515516 SPINK5Q9NQ38 1064 aaPredicted RBP17.41■□□□□ 0.38
TCOF1-215ENST00000515516 ABT1Q9ULW3 272 aaKnown RBP17.41■□□□□ 0.38
TCOF1-215ENST00000515516 XDHP47989 1333 aa17.41■□□□□ 0.38
TCOF1-215ENST00000515516 PSMD14O00487 310 aa17.4■□□□□ 0.38
TCOF1-215ENST00000515516 ATP2B4P23634 1241 aa17.4■□□□□ 0.38
TCOF1-215ENST00000515516 IGHMBP2P38935 993 aaKnown RBP17.4■□□□□ 0.38
TCOF1-215ENST00000515516 DPF2Q92785 391 aa17.4■□□□□ 0.38
TCOF1-215ENST00000515516 GREM2Q9H772 168 aa17.4■□□□□ 0.38
TCOF1-215ENST00000515516 CNTNAP1P78357 1384 aa17.4■□□□□ 0.38
TCOF1-215ENST00000515516 RPS12P25398 132 aaKnown RBP17.39■□□□□ 0.37
TCOF1-215ENST00000515516 IFFO2Q5TF58 517 aa17.39■□□□□ 0.37
TCOF1-215ENST00000515516 MICALL2Q8IY33 904 aa17.39■□□□□ 0.37
TCOF1-215ENST00000515516 ZC3H15Q8WU90 426 aaKnown RBP17.39■□□□□ 0.37
TCOF1-215ENST00000515516 BSDC1Q9NW68 430 aaPredicted RBP17.39■□□□□ 0.37
TCOF1-215ENST00000515516 ZBTB12Q9Y330 459 aaPredicted RBP17.39■□□□□ 0.37
TCOF1-215ENST00000515516 HSPA1AP0DMV8 641 aaKnown RBP17.38■□□□□ 0.37
TCOF1-215ENST00000515516 HSPA1BP0DMV9 641 aaKnown RBP17.38■□□□□ 0.37
TCOF1-215ENST00000515516 DEFB115Q30KQ5 88 aa17.38■□□□□ 0.37
TCOF1-215ENST00000515516 DUOX1Q9NRD9 1551 aa17.37■□□□□ 0.37
TCOF1-215ENST00000515516 MPHOSPH8Q99549 860 aa17.37■□□□□ 0.37
TCOF1-215ENST00000515516 PLA2G12BQ9BX93 195 aa17.37■□□□□ 0.37
TCOF1-215ENST00000515516 RTL9Q8NET4 1388 aa17.37■□□□□ 0.37
TCOF1-215ENST00000515516 F6X3S4 739 aa17.36■□□□□ 0.37
TCOF1-215ENST00000515516 ITGA6P23229 1130 aa17.36■□□□□ 0.37
TCOF1-215ENST00000515516 VEGFBP49765 207 aa17.36■□□□□ 0.37
TCOF1-215ENST00000515516 KCNQ5Q9NR82 932 aa17.36■□□□□ 0.37
TCOF1-215ENST00000515516 MINPP1Q9UNW1 487 aa17.36■□□□□ 0.37
TCOF1-215ENST00000515516 LRRC37AA6NMS7 1700 aa17.35■□□□□ 0.37
TCOF1-215ENST00000515516 RASSF10A6NK89 507 aa17.35■□□□□ 0.37
TCOF1-215ENST00000515516 TRAF5O00463 557 aa17.35■□□□□ 0.37
TCOF1-215ENST00000515516 VIL1P09327 827 aaKnown RBP17.35■□□□□ 0.37
TCOF1-215ENST00000515516 PAXIP1Q6ZW49 1069 aaPredicted RBP17.35■□□□□ 0.37
TCOF1-215ENST00000515516 CDC37L1Q7L3B6 337 aa17.35■□□□□ 0.37
TCOF1-215ENST00000515516 TRPM4Q8TD43 1214 aa17.35■□□□□ 0.37
TCOF1-215ENST00000515516 ANKRD2Q9GZV1 360 aa17.35■□□□□ 0.37
TCOF1-215ENST00000515516 PGAP2Q9UHJ9 254 aa17.35■□□□□ 0.37
TCOF1-215ENST00000515516 LTBP1Q14766 1721 aa17.35■□□□□ 0.37
TCOF1-215ENST00000515516 ADAMTSL1Q8N6G6 1762 aa17.35■□□□□ 0.37
TCOF1-215ENST00000515516 SHTN1A0MZ66 631 aa17.34■□□□□ 0.37
TCOF1-215ENST00000515516 ANKRD18BA2A2Z9 1011 aa17.34■□□□□ 0.37
TCOF1-215ENST00000515516 CSF1RP07333 972 aa17.34■□□□□ 0.37
TCOF1-215ENST00000515516 TAF1P21675 1872 aa17.34■□□□□ 0.37
TCOF1-215ENST00000515516 HIRAP54198 1017 aaPredicted RBP17.34■□□□□ 0.37
TCOF1-215ENST00000515516 TBC1D10BQ4KMP7 808 aaPredicted RBP17.34■□□□□ 0.37
TCOF1-215ENST00000515516 BEND3Q5T5X7 828 aa17.34■□□□□ 0.37
TCOF1-215ENST00000515516 RBM26Q5T8P6 1007 aaKnown RBP17.34■□□□□ 0.37
TCOF1-215ENST00000515516 SLC4A10Q6U841 1118 aa17.34■□□□□ 0.37
TCOF1-215ENST00000515516 SAMD7Q7Z3H4 446 aa17.34■□□□□ 0.37
TCOF1-215ENST00000515516 PODNQ7Z5L7 613 aa17.34■□□□□ 0.37
TCOF1-215ENST00000515516 AIDAQ96BJ3 306 aa17.34■□□□□ 0.37
TCOF1-215ENST00000515516 LEMD3Q9Y2U8 911 aa17.34■□□□□ 0.37
TCOF1-215ENST00000515516 CHMP3Q9Y3E7 222 aa17.34■□□□□ 0.37
TCOF1-215ENST00000515516 E9PSI1 815 aa17.33■□□□□ 0.36
TCOF1-215ENST00000515516 CELF2O95319 508 aaKnown RBP17.33■□□□□ 0.36
TCOF1-215ENST00000515516 CCT4P50991 539 aaKnown RBP17.33■□□□□ 0.36
TCOF1-215ENST00000515516 CASP7P55210 303 aa17.33■□□□□ 0.36
TCOF1-215ENST00000515516 FMR1Q06787 632 aaKnown RBP eCLIP17.33■□□□□ 0.361e-6■■■■□ 20.4
TCOF1-215ENST00000515516 FAM161AQ3B820 660 aa17.33■□□□□ 0.36
TCOF1-215ENST00000515516 GLIS2Q9BZE0 524 aaPredicted RBP17.33■□□□□ 0.36
TCOF1-215ENST00000515516 C9orf78Q9NZ63 289 aaPredicted RBP17.33■□□□□ 0.36
TCOF1-215ENST00000515516 COL4A1P02462 1669 aa17.32■□□□□ 0.36
TCOF1-215ENST00000515516 ZNF521Q96K83 1311 aa17.32■□□□□ 0.36
TCOF1-215ENST00000515516 ECE1P42892 770 aa17.32■□□□□ 0.36
TCOF1-215ENST00000515516 KCNJ4P48050 445 aa17.32■□□□□ 0.36
TCOF1-215ENST00000515516 IFIT5Q13325 482 aaKnown RBP17.32■□□□□ 0.36
TCOF1-215ENST00000515516 CST9Q5W186 159 aa17.32■□□□□ 0.36
TCOF1-215ENST00000515516 RSBN1LQ6PCB5 846 aaPredicted RBP17.32■□□□□ 0.36
TCOF1-215ENST00000515516 USP48Q86UV5 1035 aa17.32■□□□□ 0.36
TCOF1-215ENST00000515516 AGBL3Q8NEM8 1001 aa17.32■□□□□ 0.36
TCOF1-215ENST00000515516 DCPSQ96C86 337 aaKnown RBP17.32■□□□□ 0.36
TCOF1-215ENST00000515516 ZNF408Q9H9D4 720 aa17.32■□□□□ 0.36
TCOF1-215ENST00000515516 WDR33Q9C0J8 1336 aaKnown RBP17.31■□□□□ 0.36
TCOF1-215ENST00000515516 USP17L3A6NCW0 530 aa17.31■□□□□ 0.36
TCOF1-215ENST00000515516 USP17L4A6NCW7 530 aa17.31■□□□□ 0.36
TCOF1-215ENST00000515516 ALDH1L1O75891 902 aa17.31■□□□□ 0.36
TCOF1-215ENST00000515516 TAF7LQ5H9L4 462 aa17.31■□□□□ 0.36
TCOF1-215ENST00000515516 USP17L1Q7RTZ2 530 aa17.31■□□□□ 0.36
TCOF1-215ENST00000515516 SRCIN1Q9C0H9 1055 aa17.31■□□□□ 0.36
TCOF1-215ENST00000515516 MED23Q9ULK4 1368 aa17.3■□□□□ 0.36
TCOF1-215ENST00000515516 GRM8O00222 908 aa17.3■□□□□ 0.36
TCOF1-215ENST00000515516 GRM1Q13255 1194 aa17.3■□□□□ 0.36
TCOF1-215ENST00000515516 KIF4BQ2VIQ3 1234 aa17.3■□□□□ 0.36
TCOF1-215ENST00000515516 COL13A1Q5TAT6 717 aaPredicted RBP17.3■□□□□ 0.36
TCOF1-215ENST00000515516 FBXW7Q969H0 707 aa17.3■□□□□ 0.36
TCOF1-215ENST00000515516 COA1Q9GZY4 146 aa17.3■□□□□ 0.36
TCOF1-215ENST00000515516 TLL2Q9Y6L7 1015 aa17.3■□□□□ 0.36
TCOF1-215ENST00000515516 ZNF804BA4D1E1 1349 aa17.29■□□□□ 0.36
TCOF1-215ENST00000515516 FOXO4P98177 505 aa17.29■□□□□ 0.36
TCOF1-215ENST00000515516 MAP2K1Q02750 393 aaPredicted RBP17.29■□□□□ 0.36
TCOF1-215ENST00000515516 CCDC57Q2TAC2 916 aa17.29■□□□□ 0.36
TCOF1-215ENST00000515516 KRT26Q7Z3Y9 468 aa17.29■□□□□ 0.36
TCOF1-215ENST00000515516 CAPNS2Q96L46 248 aa17.29■□□□□ 0.36
TCOF1-215ENST00000515516 WTIPA6NIX2 430 aaPredicted RBP17.28■□□□□ 0.36
TCOF1-215ENST00000515516 USP17L8P0C7I0 530 aa17.28■□□□□ 0.36
TCOF1-215ENST00000515516 CHRNDQ07001 517 aa17.28■□□□□ 0.36
TCOF1-215ENST00000515516 LMBR1LQ6UX01 489 aa17.28■□□□□ 0.36
TCOF1-215ENST00000515516 CCER2I3L3R5 266 aa17.27■□□□□ 0.36
TCOF1-215ENST00000515516 EGFRP00533 1210 aa17.27■□□□□ 0.36
TCOF1-215ENST00000515516 CTCFP49711 727 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms