RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 PLA2G12BQ9BX93 195 aa13.36□□□□□ -0.27
HMGXB3-205ENST00000514469 DBNDD1Q9H9R9 158 aa13.36□□□□□ -0.27
HMGXB3-205ENST00000514469 CACNA1FO60840 1977 aa13.36□□□□□ -0.27
HMGXB3-205ENST00000514469 XDHP47989 1333 aa13.36□□□□□ -0.27
HMGXB3-205ENST00000514469 SPEF2Q9C093 1822 aa13.35□□□□□ -0.27
HMGXB3-205ENST00000514469 RIMBP2O15034 1052 aa13.35□□□□□ -0.27
HMGXB3-205ENST00000514469 ECE2O60344 883 aa13.35□□□□□ -0.27
HMGXB3-205ENST00000514469 UFL1O94874 794 aa13.35□□□□□ -0.27
HMGXB3-205ENST00000514469 BCL2L13Q9BXK5 485 aa13.35□□□□□ -0.27
HMGXB3-205ENST00000514469 GREM2Q9H772 168 aa13.35□□□□□ -0.27
HMGXB3-205ENST00000514469 ANKIB1Q9P2G1 1089 aa13.35□□□□□ -0.27
HMGXB3-205ENST00000514469 GGA1Q9UJY5 639 aa13.35□□□□□ -0.27
HMGXB3-205ENST00000514469 ZNF609O15014 1411 aa13.35□□□□□ -0.27
HMGXB3-205ENST00000514469 PSMD14O00487 310 aa13.34□□□□□ -0.27
HMGXB3-205ENST00000514469 BSDC1Q9NW68 430 aaPredicted RBP13.34□□□□□ -0.27
HMGXB3-205ENST00000514469 MKRN1Q9UHC7 482 aaKnown RBP13.34□□□□□ -0.27
HMGXB3-205ENST00000514469 RPS12P25398 132 aaKnown RBP13.33□□□□□ -0.28
HMGXB3-205ENST00000514469 DOK7Q18PE1 504 aa13.33□□□□□ -0.28
HMGXB3-205ENST00000514469 BEND3Q5T5X7 828 aa13.33□□□□□ -0.28
HMGXB3-205ENST00000514469 TRPM4Q8TD43 1214 aa13.33□□□□□ -0.28
HMGXB3-205ENST00000514469 DPF2Q92785 391 aa13.33□□□□□ -0.28
HMGXB3-205ENST00000514469 ZC3H12CQ9C0D7 883 aaKnown RBP13.33□□□□□ -0.28
HMGXB3-205ENST00000514469 PGAP2Q9UHJ9 254 aa13.33□□□□□ -0.28
HMGXB3-205ENST00000514469 MED23Q9ULK4 1368 aa13.32□□□□□ -0.28
HMGXB3-205ENST00000514469 PSME4Q14997 1843 aa13.32□□□□□ -0.28
HMGXB3-205ENST00000514469 THSD7BQ9C0I4 1608 aa13.32□□□□□ -0.28
HMGXB3-205ENST00000514469 SHTN1A0MZ66 631 aa13.32□□□□□ -0.28
HMGXB3-205ENST00000514469 RASSF10A6NK89 507 aa13.32□□□□□ -0.28
HMGXB3-205ENST00000514469 F6X3S4 739 aa13.32□□□□□ -0.28
HMGXB3-205ENST00000514469 CSF1RP07333 972 aa13.32□□□□□ -0.28
HMGXB3-205ENST00000514469 ATP2B4P23634 1241 aa13.32□□□□□ -0.28
HMGXB3-205ENST00000514469 HIRAP54198 1017 aaPredicted RBP13.32□□□□□ -0.28
HMGXB3-205ENST00000514469 FAM161AQ3B820 660 aa13.32□□□□□ -0.28
HMGXB3-205ENST00000514469 MICALL2Q8IY33 904 aa13.32□□□□□ -0.28
HMGXB3-205ENST00000514469 KCNQ5Q9NR82 932 aa13.32□□□□□ -0.28
HMGXB3-205ENST00000514469 CNOT7Q9UIV1 285 aaKnown RBP13.32□□□□□ -0.28
HMGXB3-205ENST00000514469 MINPP1Q9UNW1 487 aa13.32□□□□□ -0.28
HMGXB3-205ENST00000514469 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
HMGXB3-205ENST00000514469 SCN9AQ15858 1988 aa13.32□□□□□ -0.28
HMGXB3-205ENST00000514469 ITGA6P23229 1130 aa13.31□□□□□ -0.28
HMGXB3-205ENST00000514469 FMR1Q06787 632 aaKnown RBP eCLIP13.31□□□□□ -0.283e-6■■■□□ 18.9
HMGXB3-205ENST00000514469 ZC3H15Q8WU90 426 aaKnown RBP13.31□□□□□ -0.28
HMGXB3-205ENST00000514469 ZNF646O15015 1829 aaPredicted RBP13.31□□□□□ -0.28
HMGXB3-205ENST00000514469 E9PSI1 815 aa13.3□□□□□ -0.28
HMGXB3-205ENST00000514469 H7C1D1 291 aa13.3□□□□□ -0.28
HMGXB3-205ENST00000514469 TRAF5O00463 557 aa13.3□□□□□ -0.28
HMGXB3-205ENST00000514469 VIL1P09327 827 aaKnown RBP13.3□□□□□ -0.28
HMGXB3-205ENST00000514469 HSPA1AP0DMV8 641 aaKnown RBP13.3□□□□□ -0.28
HMGXB3-205ENST00000514469 HSPA1BP0DMV9 641 aaKnown RBP13.3□□□□□ -0.28
HMGXB3-205ENST00000514469 IGHMBP2P38935 993 aaKnown RBP13.3□□□□□ -0.28
HMGXB3-205ENST00000514469 A0A1B0GUL6 1792 aa13.3□□□□□ -0.28
HMGXB3-205ENST00000514469 WTIPA6NIX2 430 aaPredicted RBP13.29□□□□□ -0.28
HMGXB3-205ENST00000514469 EGFRP00533 1210 aa13.29□□□□□ -0.28
HMGXB3-205ENST00000514469 VEGFBP49765 207 aa13.29□□□□□ -0.28
HMGXB3-205ENST00000514469 CCT4P50991 539 aaKnown RBP13.29□□□□□ -0.28
HMGXB3-205ENST00000514469 FOXO4P98177 505 aa13.29□□□□□ -0.28
HMGXB3-205ENST00000514469 CST9Q5W186 159 aa13.29□□□□□ -0.28
HMGXB3-205ENST00000514469 TRPM7Q96QT4 1865 aa13.29□□□□□ -0.28
HMGXB3-205ENST00000514469 G3V3G9 751 aa13.28□□□□□ -0.28
HMGXB3-205ENST00000514469 CCER2I3L3R5 266 aa13.28□□□□□ -0.28
HMGXB3-205ENST00000514469 GRM8O00222 908 aa13.28□□□□□ -0.28
HMGXB3-205ENST00000514469 ALDH1L1O75891 902 aa13.28□□□□□ -0.28
HMGXB3-205ENST00000514469 DCAF8Q5TAQ9 597 aa13.28□□□□□ -0.28
HMGXB3-205ENST00000514469 IFFO2Q5TF58 517 aa13.28□□□□□ -0.28
HMGXB3-205ENST00000514469 SAMD7Q7Z3H4 446 aa13.28□□□□□ -0.28
HMGXB3-205ENST00000514469 PODNQ7Z5L7 613 aa13.28□□□□□ -0.28
HMGXB3-205ENST00000514469 MRPL50Q8N5N7 158 aaKnown RBP13.28□□□□□ -0.28
HMGXB3-205ENST00000514469 GLIS2Q9BZE0 524 aaPredicted RBP13.28□□□□□ -0.28
HMGXB3-205ENST00000514469 ABT1Q9ULW3 272 aaKnown RBP13.28□□□□□ -0.28
HMGXB3-205ENST00000514469 ANKRD18BA2A2Z9 1011 aa13.27□□□□□ -0.29
HMGXB3-205ENST00000514469 SLFN5Q08AF3 891 aa13.27□□□□□ -0.29
HMGXB3-205ENST00000514469 DEFB115Q30KQ5 88 aa13.27□□□□□ -0.29
HMGXB3-205ENST00000514469 TBC1D10BQ4KMP7 808 aaPredicted RBP13.27□□□□□ -0.29
HMGXB3-205ENST00000514469 RSBN1LQ6PCB5 846 aaPredicted RBP13.27□□□□□ -0.29
HMGXB3-205ENST00000514469 AGBL3Q8NEM8 1001 aa13.27□□□□□ -0.29
HMGXB3-205ENST00000514469 GMLQ99445 158 aa13.27□□□□□ -0.29
HMGXB3-205ENST00000514469 MPHOSPH8Q99549 860 aa13.27□□□□□ -0.29
HMGXB3-205ENST00000514469 SRCIN1Q9C0H9 1055 aa13.27□□□□□ -0.29
HMGXB3-205ENST00000514469 ANKRD2Q9GZV1 360 aa13.27□□□□□ -0.29
HMGXB3-205ENST00000514469 LEMD3Q9Y2U8 911 aa13.27□□□□□ -0.29
HMGXB3-205ENST00000514469 TLL2Q9Y6L7 1015 aa13.27□□□□□ -0.29
HMGXB3-205ENST00000514469 ZNF804BA4D1E1 1349 aa13.26□□□□□ -0.29
HMGXB3-205ENST00000514469 PTPRCP08575 1304 aa13.26□□□□□ -0.29
HMGXB3-205ENST00000514469 ZNF280AP59817 542 aaPredicted RBP13.26□□□□□ -0.29
HMGXB3-205ENST00000514469 KIF4BQ2VIQ3 1234 aa13.26□□□□□ -0.29
HMGXB3-205ENST00000514469 EPHA10Q5JZY3 1008 aa13.26□□□□□ -0.29
HMGXB3-205ENST00000514469 SLC4A10Q6U841 1118 aa13.26□□□□□ -0.29
HMGXB3-205ENST00000514469 CDC37L1Q7L3B6 337 aa13.26□□□□□ -0.29
HMGXB3-205ENST00000514469 UTYO14607 1347 aa13.25□□□□□ -0.29
HMGXB3-205ENST00000514469 WDR33Q9C0J8 1336 aaKnown RBP13.25□□□□□ -0.29
HMGXB3-205ENST00000514469 IRS2Q9Y4H2 1338 aa13.25□□□□□ -0.29
HMGXB3-205ENST00000514469 USP17L3A6NCW0 530 aa13.25□□□□□ -0.29
HMGXB3-205ENST00000514469 USP17L4A6NCW7 530 aa13.25□□□□□ -0.29
HMGXB3-205ENST00000514469 CELF2O95319 508 aaKnown RBP13.25□□□□□ -0.29
HMGXB3-205ENST00000514469 KLRK1P26718 216 aa13.25□□□□□ -0.29
HMGXB3-205ENST00000514469 CHRNDQ07001 517 aa13.25□□□□□ -0.29
HMGXB3-205ENST00000514469 IFIT5Q13325 482 aaKnown RBP13.25□□□□□ -0.29
HMGXB3-205ENST00000514469 COL13A1Q5TAT6 717 aaPredicted RBP13.25□□□□□ -0.29
HMGXB3-205ENST00000514469 LMBR1LQ6UX01 489 aa13.25□□□□□ -0.29
HMGXB3-205ENST00000514469 USP17L1Q7RTZ2 530 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms