RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 SLC51AQ86UW1 340 aa18.12■□□□□ 0.49
SNF8-212ENST00000514089 NIM1KQ8IY84 436 aa18.12■□□□□ 0.49
SNF8-212ENST00000514089 VPS33BQ9H267 617 aa18.12■□□□□ 0.49
SNF8-212ENST00000514089 XDHP47989 1333 aa18.12■□□□□ 0.49
SNF8-212ENST00000514089 SRGAP3O43295 1099 aa18.11■□□□□ 0.49
SNF8-212ENST00000514089 AOC3Q16853 763 aa18.11■□□□□ 0.49
SNF8-212ENST00000514089 TBC1D16Q8TBP0 767 aa18.11■□□□□ 0.49
SNF8-212ENST00000514089 RTFDC1Q9BY42 306 aaPredicted RBP18.11■□□□□ 0.49
SNF8-212ENST00000514089 KIAA1551Q9HCM1 1747 aa18.1■□□□□ 0.49
SNF8-212ENST00000514089 RRP1P56182 461 aaKnown RBP18.1■□□□□ 0.49
SNF8-212ENST00000514089 EIF6P56537 245 aaKnown RBP18.1■□□□□ 0.49
SNF8-212ENST00000514089 CHRNDQ07001 517 aa18.1■□□□□ 0.49
SNF8-212ENST00000514089 C1orf115Q9H7X2 142 aa18.1■□□□□ 0.49
SNF8-212ENST00000514089 PODXL2Q9NZ53 605 aa18.1■□□□□ 0.49
SNF8-212ENST00000514089 POLLQ9UGP5 575 aa18.1■□□□□ 0.49
SNF8-212ENST00000514089 LEMD3Q9Y2U8 911 aa18.1■□□□□ 0.49
SNF8-212ENST00000514089 GOLGB1Q14789 3259 aaKnown RBP18.1■□□□□ 0.49
SNF8-212ENST00000514089 METTL24Q5JXM2 366 aa18.09■□□□□ 0.49
SNF8-212ENST00000514089 HELBQ8NG08 1087 aaPredicted RBP18.09■□□□□ 0.49
SNF8-212ENST00000514089 KLHDC4Q8TBB5 520 aa18.09■□□□□ 0.49
SNF8-212ENST00000514089 SIL1Q9H173 461 aa18.09■□□□□ 0.49
SNF8-212ENST00000514089 COL11A2P13942 1736 aaPredicted RBP18.09■□□□□ 0.49
SNF8-212ENST00000514089 TAF5LO75529 589 aa18.08■□□□□ 0.48
SNF8-212ENST00000514089 PRELPP51888 382 aa18.08■□□□□ 0.48
SNF8-212ENST00000514089 C20orf194Q5TEA3 1177 aa18.08■□□□□ 0.48
SNF8-212ENST00000514089 ZNF804BA4D1E1 1349 aa18.07■□□□□ 0.48
SNF8-212ENST00000514089 MROH5Q6ZUA9 1318 aa18.07■□□□□ 0.48
SNF8-212ENST00000514089 KDM2BQ8NHM5 1336 aa18.07■□□□□ 0.48
SNF8-212ENST00000514089 KIAA2012Q0VF49 1180 aa18.07■□□□□ 0.48
SNF8-212ENST00000514089 DOK7Q18PE1 504 aa18.07■□□□□ 0.48
SNF8-212ENST00000514089 GPR101Q96P66 508 aaPredicted RBP18.07■□□□□ 0.48
SNF8-212ENST00000514089 PUS3Q9BZE2 481 aaKnown RBP18.07■□□□□ 0.48
SNF8-212ENST00000514089 GPBP1L1Q9HC44 474 aaPredicted RBP18.07■□□□□ 0.48
SNF8-212ENST00000514089 SLX4Q8IY92 1834 aa18.07■□□□□ 0.48
SNF8-212ENST00000514089 ZC3H4Q9UPT8 1303 aaKnown RBP18.06■□□□□ 0.48
SNF8-212ENST00000514089 EYA2O00167 538 aa18.06■□□□□ 0.48
SNF8-212ENST00000514089 OS9Q13438 667 aaPredicted RBP18.06■□□□□ 0.48
SNF8-212ENST00000514089 LRRC24Q50LG9 513 aa18.06■□□□□ 0.48
SNF8-212ENST00000514089 ZNRF3Q9ULT6 936 aa18.06■□□□□ 0.48
SNF8-212ENST00000514089 SUPT16HQ9Y5B9 1047 aaKnown RBP18.06■□□□□ 0.48
SNF8-212ENST00000514089 GJA3Q9Y6H8 435 aa18.06■□□□□ 0.48
SNF8-212ENST00000514089 ATP8B2P98198 1209 aa18.05■□□□□ 0.48
SNF8-212ENST00000514089 PTPN12Q05209 780 aaKnown RBP18.05■□□□□ 0.48
SNF8-212ENST00000514089 G3BP1Q13283 466 aaKnown RBP eCLIP18.05■□□□□ 0.48
SNF8-212ENST00000514089 CEP126Q9P2H0 1117 aa18.05■□□□□ 0.48
SNF8-212ENST00000514089 RIPOR2Q9Y4F9 1068 aa18.05■□□□□ 0.48
SNF8-212ENST00000514089 DDX60Q8IY21 1712 aaKnown RBP18.04■□□□□ 0.48
SNF8-212ENST00000514089 GLTPD2A6NH11 291 aa18.04■□□□□ 0.48
SNF8-212ENST00000514089 ZNF784Q8NCA9 323 aaPredicted RBP18.04■□□□□ 0.48
SNF8-212ENST00000514089 DBNDD1Q9H9R9 158 aa18.04■□□□□ 0.48
SNF8-212ENST00000514089 FBXO3Q9UK99 471 aa18.04■□□□□ 0.48
SNF8-212ENST00000514089 PA2G4Q9UQ80 394 aaKnown RBP18.04■□□□□ 0.48
SNF8-212ENST00000514089 UTRNP46939 3433 aa18.04■□□□□ 0.48
SNF8-212ENST00000514089 IL15P40933 162 aaPredicted RBP18.03■□□□□ 0.48
SNF8-212ENST00000514089 RFX5P48382 616 aaPredicted RBP18.03■□□□□ 0.48
SNF8-212ENST00000514089 MTX1Q13505 466 aa18.03■□□□□ 0.48
SNF8-212ENST00000514089 TNIP1Q15025 636 aa18.03■□□□□ 0.48
SNF8-212ENST00000514089 VPS37DQ86XT2 251 aa18.03■□□□□ 0.48
SNF8-212ENST00000514089 COPRSQ9NQ92 184 aa18.03■□□□□ 0.48
SNF8-212ENST00000514089 ZBTB40Q9NUA8 1239 aa18.03■□□□□ 0.48
SNF8-212ENST00000514089 DLEC1Q9Y238 1755 aa18.02■□□□□ 0.48
SNF8-212ENST00000514089 PNMA6EA0A0J9YXQ4 647 aa18.02■□□□□ 0.48
SNF8-212ENST00000514089 FZD9O00144 591 aa18.02■□□□□ 0.48
SNF8-212ENST00000514089 ECE2O60344 883 aa18.02■□□□□ 0.48
SNF8-212ENST00000514089 HMMRO75330 724 aa18.02■□□□□ 0.48
SNF8-212ENST00000514089 SURF6O75683 361 aaKnown RBP18.02■□□□□ 0.48
SNF8-212ENST00000514089 RAD17O75943 681 aa18.02■□□□□ 0.48
SNF8-212ENST00000514089 CIAO1O76071 339 aa18.02■□□□□ 0.48
SNF8-212ENST00000514089 DDNO94850 711 aaPredicted RBP18.02■□□□□ 0.48
SNF8-212ENST00000514089 FBXW7Q969H0 707 aa18.02■□□□□ 0.48
SNF8-212ENST00000514089 WTIPA6NIX2 430 aaPredicted RBP18.01■□□□□ 0.47
SNF8-212ENST00000514089 PDE8BO95263 885 aa18.01■□□□□ 0.47
SNF8-212ENST00000514089 IFIT1P09914 478 aaKnown RBP18.01■□□□□ 0.47
SNF8-212ENST00000514089 UBE4AQ14139 1066 aa18.01■□□□□ 0.47
SNF8-212ENST00000514089 CAVIN4Q5BKX8 364 aa18.01■□□□□ 0.47
SNF8-212ENST00000514089 CIAPIN1Q6FI81 312 aa18.01■□□□□ 0.47
SNF8-212ENST00000514089 RPAP2Q8IXW5 612 aaPredicted RBP18.01■□□□□ 0.47
SNF8-212ENST00000514089 C16orf71Q8IYS4 520 aaPredicted RBP18.01■□□□□ 0.47
SNF8-212ENST00000514089 RRAGCQ9HB90 399 aa18.01■□□□□ 0.47
SNF8-212ENST00000514089 SNAP23O00161 211 aa18■□□□□ 0.47
SNF8-212ENST00000514089 FRAT2O75474 233 aaPredicted RBP18■□□□□ 0.47
SNF8-212ENST00000514089 PUM3Q15397 648 aaKnown RBP18■□□□□ 0.47
SNF8-212ENST00000514089 CEP85Q6P2H3 762 aa18■□□□□ 0.47
SNF8-212ENST00000514089 ZNF804AQ7Z570 1209 aa18■□□□□ 0.47
SNF8-212ENST00000514089 GPC2Q8N158 579 aa18■□□□□ 0.47
SNF8-212ENST00000514089 COA1Q9GZY4 146 aa18■□□□□ 0.47
SNF8-212ENST00000514089 SLC5A1P13866 664 aa17.99■□□□□ 0.47
SNF8-212ENST00000514089 LMOD1P29536 600 aaPredicted RBP17.99■□□□□ 0.47
SNF8-212ENST00000514089 CXCL9Q07325 125 aa17.99■□□□□ 0.47
SNF8-212ENST00000514089 PODNQ7Z5L7 613 aa17.99■□□□□ 0.47
SNF8-212ENST00000514089 BRCA1P38398 1863 aaKnown RBP17.99■□□□□ 0.47
SNF8-212ENST00000514089 ZNF541Q9H0D2 1346 aa17.98■□□□□ 0.47
SNF8-212ENST00000514089 SNED1Q8TER0 1413 aa17.98■□□□□ 0.47
SNF8-212ENST00000514089 ARFGEF1Q9Y6D6 1849 aa17.98■□□□□ 0.47
SNF8-212ENST00000514089 VEGFAP15692 232 aaPredicted RBP17.98■□□□□ 0.47
SNF8-212ENST00000514089 HIBADHP31937 336 aaKnown RBP17.98■□□□□ 0.47
SNF8-212ENST00000514089 ATG9AQ7Z3C6 839 aa17.98■□□□□ 0.47
SNF8-212ENST00000514089 SSH3Q8TE77 659 aa17.98■□□□□ 0.47
SNF8-212ENST00000514089 CRBNQ96SW2 442 aa17.98■□□□□ 0.47
SNF8-212ENST00000514089 AKAP2Q9Y2D5 859 aa17.98■□□□□ 0.47
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