RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 CHMP4BP1P59074 171 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 USP48Q86UV5 1035 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 NCOA7Q8NI08 942 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 RUSC2Q8N2Y8 1516 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 RBM26Q5T8P6 1007 aaKnown RBP9.48□□□□□ -0.89
HTT-208ENST00000510626 WDR78Q5VTH9 848 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 GPR161Q8N6U8 529 aaKnown RBP9.48□□□□□ -0.89
HTT-208ENST00000510626 ZHX3Q9H4I2 956 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 DMTNQ08495 405 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 NEK1Q96PY6 1258 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 NAA25Q14CX7 972 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 FCHSD1Q86WN1 690 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 RUBCNQ92622 972 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 TMX3Q96JJ7 454 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 IGHMBP2P38935 993 aaKnown RBP9.48□□□□□ -0.89
HTT-208ENST00000510626 TAF7Q15545 349 aaPredicted RBP9.48□□□□□ -0.89
HTT-208ENST00000510626 CCDC14Q49A88 953 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 EVI5O60447 810 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 NBPF9Q3BBW0 867 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 PUS7Q96PZ0 661 aaKnown RBP9.48□□□□□ -0.89
HTT-208ENST00000510626 TATP17735 454 aaPredicted RBP9.48□□□□□ -0.89
HTT-208ENST00000510626 NLRP6P59044 892 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 WHAMMP3Q1A5X7 153 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 TTC41PQ6P2S7 1318 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 SCLT1Q96NL6 688 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 RAB3IPQ96QF0 476 aaPredicted RBP9.48□□□□□ -0.89
HTT-208ENST00000510626 RABGAP1Q9Y3P9 1069 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 SCAF11Q99590 1463 aaKnown RBP9.48□□□□□ -0.89
HTT-208ENST00000510626 CALML3P27482 149 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 GOLGA6CA6NDK9 693 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 IFIT1P09914 478 aaKnown RBP9.48□□□□□ -0.89
HTT-208ENST00000510626 GOLGA6DP0CG33 693 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 ZNF76P36508 570 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 SEC62Q99442 399 aaKnown RBP9.48□□□□□ -0.89
HTT-208ENST00000510626 GOLGA6AQ9NYA3 693 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 RTEL1-TNFRSF6BF6WH68 1400 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 UBA7P41226 1012 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 MAP3K21Q5TCX8 1036 aa9.48□□□□□ -0.89
HTT-208ENST00000510626 NKIRAS1Q9NYS0 192 aa9.47□□□□□ -0.89
HTT-208ENST00000510626 DDX23Q9BUQ8 820 aaKnown RBP9.47□□□□□ -0.89
HTT-208ENST00000510626 NAPBQ9H115 298 aa9.47□□□□□ -0.89
HTT-208ENST00000510626 ACTN4O43707 911 aaKnown RBP9.47□□□□□ -0.89
HTT-208ENST00000510626 CTNNA2P26232 953 aa9.47□□□□□ -0.89
HTT-208ENST00000510626 ANO6Q4KMQ2 910 aa9.47□□□□□ -0.89
HTT-208ENST00000510626 SNAPC4Q5SXM2 1469 aa9.47□□□□□ -0.89
HTT-208ENST00000510626 PIK3R4Q99570 1358 aa9.47□□□□□ -0.89
HTT-208ENST00000510626 KRI1Q8N9T8 703 aaKnown RBP9.47□□□□□ -0.89
HTT-208ENST00000510626 NSD3Q9BZ95 1437 aa9.47□□□□□ -0.89
HTT-208ENST00000510626 SPATS2LQ9NUQ6 558 aaKnown RBP9.47□□□□□ -0.89
HTT-208ENST00000510626 FAN1Q9Y2M0 1017 aa9.47□□□□□ -0.89
HTT-208ENST00000510626 HSP90AA5PQ58FG0 334 aa9.47□□□□□ -0.89
HTT-208ENST00000510626 TAOK1Q7L7X3 1001 aa9.47□□□□□ -0.89
HTT-208ENST00000510626 RLBP1P12271 317 aa9.47□□□□□ -0.89
HTT-208ENST00000510626 GRIN2BQ13224 1484 aa9.47□□□□□ -0.89
HTT-208ENST00000510626 CDK19Q9BWU1 502 aa9.47□□□□□ -0.89
HTT-208ENST00000510626 FAM160A1Q05DH4 1040 aa9.47□□□□□ -0.89
HTT-208ENST00000510626 SEPT2Q15019 361 aa9.47□□□□□ -0.89
HTT-208ENST00000510626 SPTY2D1Q68D10 685 aaPredicted RBP9.47□□□□□ -0.89
HTT-208ENST00000510626 ZNF530Q6P9A1 599 aaPredicted RBP9.47□□□□□ -0.89
HTT-208ENST00000510626 PAF1Q8N7H5 531 aa9.47□□□□□ -0.89
HTT-208ENST00000510626 ABTB2Q8N961 1025 aa9.47□□□□□ -0.89
HTT-208ENST00000510626 CCDC42Q96M95 316 aa9.47□□□□□ -0.89
HTT-208ENST00000510626 ASXL1Q8IXJ9 1541 aa9.46□□□□□ -0.89
HTT-208ENST00000510626 AK9Q5TCS8 1911 aa9.46□□□□□ -0.89
HTT-208ENST00000510626 CLNS1AP54105 237 aaKnown RBP9.46□□□□□ -0.89
HTT-208ENST00000510626 CCDC186Q7Z3E2 898 aa9.46□□□□□ -0.89
HTT-208ENST00000510626 NPC1L1Q9UHC9 1359 aa9.46□□□□□ -0.89
HTT-208ENST00000510626 F13A1P00488 732 aa9.46□□□□□ -0.89
HTT-208ENST00000510626 BTBD11A6QL63 1104 aa9.46□□□□□ -0.89
HTT-208ENST00000510626 NOP2P46087 812 aaKnown RBP9.46□□□□□ -0.89
HTT-208ENST00000510626 ORC3Q9UBD5 711 aaPredicted RBP9.46□□□□□ -0.89
HTT-208ENST00000510626 DNAJC8O75937 253 aaPredicted RBP9.46□□□□□ -0.9
HTT-208ENST00000510626 KCNH5Q8NCM2 988 aa9.46□□□□□ -0.9
HTT-208ENST00000510626 NUP58Q9BVL2 599 aa9.46□□□□□ -0.9
HTT-208ENST00000510626 LRP2BPQ9P2M1 347 aa9.46□□□□□ -0.9
HTT-208ENST00000510626 AKR1B15C9JRZ8 316 aaPredicted RBP9.46□□□□□ -0.9
HTT-208ENST00000510626 PPFIA4O75335 1185 aa9.46□□□□□ -0.9
HTT-208ENST00000510626 SSBP05455 408 aaKnown RBP eCLIP9.46□□□□□ -0.9
HTT-208ENST00000510626 FKBP4Q02790 459 aaKnown RBP eCLIP9.46□□□□□ -0.9
HTT-208ENST00000510626 CCDC65Q8IXS2 484 aa9.46□□□□□ -0.9
HTT-208ENST00000510626 MSANTD4Q8NCY6 345 aa9.46□□□□□ -0.9
HTT-208ENST00000510626 CASQ2O14958 399 aaPredicted RBP9.46□□□□□ -0.9
HTT-208ENST00000510626 USP5P45974 858 aa9.46□□□□□ -0.9
HTT-208ENST00000510626 ZNF213O14771 459 aa9.46□□□□□ -0.9
HTT-208ENST00000510626 KRBA2Q6ZNG9 492 aa9.46□□□□□ -0.9
HTT-208ENST00000510626 ATF3P18847 181 aa9.46□□□□□ -0.9
HTT-208ENST00000510626 VPS18Q9P253 973 aa9.46□□□□□ -0.9
HTT-208ENST00000510626 DBF4Q9UBU7 674 aaPredicted RBP9.46□□□□□ -0.9
HTT-208ENST00000510626 MEX3CQ5U5Q3 659 aaKnown RBP9.45□□□□□ -0.9
HTT-208ENST00000510626 CCDC62Q6P9F0 684 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 SLC5A1P13866 664 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 SULT6B1Q6IMI4 303 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 MPNDQ8N594 471 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 NUCKS1Q9H1E3 243 aaKnown RBP9.45□□□□□ -0.9
HTT-208ENST00000510626 FEZ2Q9UHY8 353 aaPredicted RBP9.45□□□□□ -0.9
HTT-208ENST00000510626 MTUS1Q9ULD2 1270 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 FYB2Q5VWT5 728 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 PRIM1P49642 420 aaKnown RBP9.45□□□□□ -0.9
HTT-208ENST00000510626 PHLDB3Q6NSJ2 640 aa9.45□□□□□ -0.9
HTT-208ENST00000510626 CYP26C1Q6V0L0 522 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms