RNA–Protein interactions for RNA: ENST00000510526.2

HMGB3P3-201, Transcript of high mobility group box 3 pseudogene 3, humanhuman

BASIC

Gene HMGB3P3, Length 400 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P3-201ENST00000510526 CD68P34810 354 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P3-201ENST00000510526 DPYDQ12882 1025 aa4.27□□□□□ -1.73
HMGB3P3-201ENST00000510526 RNF43Q68DV7 783 aa4.27□□□□□ -1.73
HMGB3P3-201ENST00000510526 DTX1Q86Y01 620 aa4.27□□□□□ -1.73
HMGB3P3-201ENST00000510526 AGGF1Q8N302 714 aaeCLIP4.27□□□□□ -1.73
HMGB3P3-201ENST00000510526 UTP4Q969X6 686 aaKnown RBP4.27□□□□□ -1.73
HMGB3P3-201ENST00000510526 UBL7Q96S82 380 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P3-201ENST00000510526 QTRT2Q9H974 415 aaKnown RBP4.27□□□□□ -1.73
HMGB3P3-201ENST00000510526 MAFBQ9Y5Q3 323 aaPredicted RBP4.27□□□□□ -1.73
HMGB3P3-201ENST00000510526 FAM196BA6NMK8 535 aa4.26□□□□□ -1.73
HMGB3P3-201ENST00000510526 FAM177BA6PVY3 158 aa4.26□□□□□ -1.73
HMGB3P3-201ENST00000510526 OPLAHO14841 1288 aa4.26□□□□□ -1.73
HMGB3P3-201ENST00000510526 MMP20O60882 483 aa4.26□□□□□ -1.73
HMGB3P3-201ENST00000510526 PTK7Q13308 1070 aa4.26□□□□□ -1.73
HMGB3P3-201ENST00000510526 LCE1DQ5T752 114 aa4.26□□□□□ -1.73
HMGB3P3-201ENST00000510526 FAM117BQ6P1L5 589 aa4.26□□□□□ -1.73
HMGB3P3-201ENST00000510526 ANKMY2Q8IV38 441 aa4.26□□□□□ -1.73
HMGB3P3-201ENST00000510526 RGL4Q8IZJ4 473 aa4.26□□□□□ -1.73
HMGB3P3-201ENST00000510526 ARMC10Q8N2F6 343 aa4.26□□□□□ -1.73
HMGB3P3-201ENST00000510526 KLHL23Q8NBE8 558 aa4.26□□□□□ -1.73
HMGB3P3-201ENST00000510526 SPACA7Q96KW9 195 aa4.26□□□□□ -1.73
HMGB3P3-201ENST00000510526 NSUN5Q96P11 429 aaKnown RBP4.26□□□□□ -1.73
HMGB3P3-201ENST00000510526 TFIP11Q9UBB9 837 aaKnown RBP4.26□□□□□ -1.73
HMGB3P3-201ENST00000510526 TRIM33Q9UPN9 1127 aa4.26□□□□□ -1.73
HMGB3P3-201ENST00000510526 ARID1BQ8NFD5 2236 aaPredicted RBP4.26□□□□□ -1.73
HMGB3P3-201ENST00000510526 SMNDC1O75940 238 aaKnown RBP eCLIP4.25□□□□□ -1.73
HMGB3P3-201ENST00000510526 WEE1P30291 646 aa4.25□□□□□ -1.73
HMGB3P3-201ENST00000510526 ACAD11Q709F0 780 aa4.25□□□□□ -1.73
HMGB3P3-201ENST00000510526 NLRP13Q86W25 1043 aa4.25□□□□□ -1.73
HMGB3P3-201ENST00000510526 TREML1Q86YW5 311 aa4.25□□□□□ -1.73
HMGB3P3-201ENST00000510526 CLEC10AQ8IUN9 316 aa4.25□□□□□ -1.73
HMGB3P3-201ENST00000510526 TRIM42Q8IWZ5 723 aa4.25□□□□□ -1.73
HMGB3P3-201ENST00000510526 GIMAP7Q8NHV1 300 aa4.25□□□□□ -1.73
HMGB3P3-201ENST00000510526 FAM46AQ96IP4 442 aaKnown RBP4.25□□□□□ -1.73
HMGB3P3-201ENST00000510526 MYRFLQ96LU7 910 aa4.25□□□□□ -1.73
HMGB3P3-201ENST00000510526 C7orf69Q9H7B7 122 aa4.25□□□□□ -1.73
HMGB3P3-201ENST00000510526 FAM13BQ9NYF5 915 aa4.25□□□□□ -1.73
HMGB3P3-201ENST00000510526 KCNMB2Q9Y691 235 aa4.25□□□□□ -1.73
HMGB3P3-201ENST00000510526 USP17L15C9J2P7 530 aa4.24□□□□□ -1.73
HMGB3P3-201ENST00000510526 USP17L10C9JJH3 530 aa4.24□□□□□ -1.73
HMGB3P3-201ENST00000510526 USP17L13C9JLJ4 530 aa4.24□□□□□ -1.73
HMGB3P3-201ENST00000510526 USP17L12C9JPN9 530 aa4.24□□□□□ -1.73
HMGB3P3-201ENST00000510526 USP17L11C9JVI0 530 aa4.24□□□□□ -1.73
HMGB3P3-201ENST00000510526 USP17L21D6R901 530 aa4.24□□□□□ -1.73
HMGB3P3-201ENST00000510526 USP17L18D6R9N7 530 aa4.24□□□□□ -1.73
HMGB3P3-201ENST00000510526 USP17L22D6RA61 530 aa4.24□□□□□ -1.73
HMGB3P3-201ENST00000510526 USP17L17D6RBQ6 530 aa4.24□□□□□ -1.73
HMGB3P3-201ENST00000510526 USP17L19D6RCP7 530 aa4.24□□□□□ -1.73
HMGB3P3-201ENST00000510526 USP17L20D6RJB6 530 aa4.24□□□□□ -1.73
HMGB3P3-201ENST00000510526 LINC01387J3KSC0 135 aa4.24□□□□□ -1.73
HMGB3P3-201ENST00000510526 SART1O43290 800 aaKnown RBP4.24□□□□□ -1.73
HMGB3P3-201ENST00000510526 CDC27P30260 824 aa4.24□□□□□ -1.73
HMGB3P3-201ENST00000510526 USP17L24Q0WX57 530 aa4.24□□□□□ -1.73
HMGB3P3-201ENST00000510526 HYAL2Q12891 473 aa4.24□□□□□ -1.73
HMGB3P3-201ENST00000510526 DUOXA2Q1HG44 320 aa4.24□□□□□ -1.73
HMGB3P3-201ENST00000510526 CRTC2Q53ET0 693 aaPredicted RBP4.24□□□□□ -1.73
HMGB3P3-201ENST00000510526 GALNT11Q8NCW6 608 aa4.24□□□□□ -1.73
HMGB3P3-201ENST00000510526 FAM83CQ9BQN1 747 aa4.24□□□□□ -1.73
HMGB3P3-201ENST00000510526 VRTNQ9H8Y1 702 aa4.24□□□□□ -1.73
HMGB3P3-201ENST00000510526 HIF3AQ9Y2N7 669 aa4.24□□□□□ -1.73
HMGB3P3-201ENST00000510526 HMX2A2RU54 273 aa4.23□□□□□ -1.73
HMGB3P3-201ENST00000510526 PRR19A6NJB7 356 aa4.23□□□□□ -1.73
HMGB3P3-201ENST00000510526 ANKRD34AQ69YU3 496 aa4.23□□□□□ -1.73
HMGB3P3-201ENST00000510526 GLMNQ92990 594 aa4.23□□□□□ -1.73
HMGB3P3-201ENST00000510526 ADGRE2Q9UHX3 823 aa4.23□□□□□ -1.73
HMGB3P3-201ENST00000510526 FNDC3AQ9Y2H6 1198 aaKnown RBP4.23□□□□□ -1.73
HMGB3P3-201ENST00000510526 USP20Q9Y2K6 914 aa4.23□□□□□ -1.73
HMGB3P3-201ENST00000510526 FSCN2O14926 492 aa4.22□□□□□ -1.73
HMGB3P3-201ENST00000510526 ADAMTS4O75173 837 aa4.22□□□□□ -1.73
HMGB3P3-201ENST00000510526 LGR5O75473 907 aa4.22□□□□□ -1.73
HMGB3P3-201ENST00000510526 WISP1O95388 367 aa4.22□□□□□ -1.73
HMGB3P3-201ENST00000510526 BRD2P25440 801 aaKnown RBP4.22□□□□□ -1.73
HMGB3P3-201ENST00000510526 CPSF6Q16630 551 aaKnown RBP eCLIP4.22□□□□□ -1.73
HMGB3P3-201ENST00000510526 KANK4Q5T7N3 995 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P3-201ENST00000510526 CEP135Q66GS9 1140 aa4.22□□□□□ -1.73
HMGB3P3-201ENST00000510526 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.22□□□□□ -1.73
HMGB3P3-201ENST00000510526 KIAA1211Q6ZU35 1233 aa4.22□□□□□ -1.73
HMGB3P3-201ENST00000510526 BEND4Q6ZU67 534 aa4.22□□□□□ -1.73
HMGB3P3-201ENST00000510526 ERICH6Q7L0X2 663 aa4.22□□□□□ -1.73
HMGB3P3-201ENST00000510526 FAM20CQ8IXL6 584 aa4.22□□□□□ -1.73
HMGB3P3-201ENST00000510526 OR13H1Q8NG92 308 aa4.22□□□□□ -1.73
HMGB3P3-201ENST00000510526 SHKBP1Q8TBC3 707 aa4.22□□□□□ -1.73
HMGB3P3-201ENST00000510526 PIK3R5Q8WYR1 880 aa4.22□□□□□ -1.73
HMGB3P3-201ENST00000510526 PPP1R12CQ9BZL4 782 aa4.22□□□□□ -1.73
HMGB3P3-201ENST00000510526 KCNF1Q9H3M0 494 aa4.22□□□□□ -1.73
HMGB3P3-201ENST00000510526 LRFN2Q9ULH4 789 aa4.22□□□□□ -1.73
HMGB3P3-201ENST00000510526 ANGEL1Q9UNK9 670 aaKnown RBP4.22□□□□□ -1.73
HMGB3P3-201ENST00000510526 UBAP1LF5GYI3 381 aa4.21□□□□□ -1.74
HMGB3P3-201ENST00000510526 BMP3P12645 472 aa4.21□□□□□ -1.74
HMGB3P3-201ENST00000510526 CABP4P57796 275 aa4.21□□□□□ -1.74
HMGB3P3-201ENST00000510526 TPRNQ4KMQ1 711 aa4.21□□□□□ -1.74
HMGB3P3-201ENST00000510526 TTC39BQ5VTQ0 682 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P3-201ENST00000510526 WNT8BQ93098 351 aa4.21□□□□□ -1.74
HMGB3P3-201ENST00000510526 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.74
HMGB3P3-201ENST00000510526 LACRTQ9GZZ8 138 aa4.21□□□□□ -1.74
HMGB3P3-201ENST00000510526 RNF208Q9H0X6 261 aa4.21□□□□□ -1.74
HMGB3P3-201ENST00000510526 SEC31BQ9NQW1 1179 aa4.21□□□□□ -1.74
HMGB3P3-201ENST00000510526 KCNK4Q9NYG8 393 aa4.21□□□□□ -1.74
HMGB3P3-201ENST00000510526 PIM2Q9P1W9 311 aa4.21□□□□□ -1.74
HMGB3P3-201ENST00000510526 WDR64B1ANS9 1081 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms