RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 GJA3Q9Y6H8 435 aa17.16■□□□□ 0.34
SNF8-206ENST00000509989 PSME4Q14997 1843 aa17.15■□□□□ 0.34
SNF8-206ENST00000509989 UFL1O94874 794 aa17.15■□□□□ 0.34
SNF8-206ENST00000509989 KLRK1P26718 216 aa17.15■□□□□ 0.34
SNF8-206ENST00000509989 CXCL9Q07325 125 aa17.15■□□□□ 0.34
SNF8-206ENST00000509989 GRIPAP1Q4V328 841 aa17.15■□□□□ 0.34
SNF8-206ENST00000509989 DPY19L2Q6NUT2 758 aa17.15■□□□□ 0.34
SNF8-206ENST00000509989 NIM1KQ8IY84 436 aa17.15■□□□□ 0.34
SNF8-206ENST00000509989 HELBQ8NG08 1087 aaPredicted RBP17.15■□□□□ 0.34
SNF8-206ENST00000509989 JDP2Q8WYK2 163 aa17.15■□□□□ 0.34
SNF8-206ENST00000509989 CDC5LQ99459 802 aaKnown RBP17.15■□□□□ 0.34
SNF8-206ENST00000509989 PUS3Q9BZE2 481 aaKnown RBP17.15■□□□□ 0.34
SNF8-206ENST00000509989 TMX4Q9H1E5 349 aaPredicted RBP17.15■□□□□ 0.34
SNF8-206ENST00000509989 BSDC1Q9NW68 430 aaPredicted RBP17.15■□□□□ 0.34
SNF8-206ENST00000509989 PODXL2Q9NZ53 605 aa17.15■□□□□ 0.34
SNF8-206ENST00000509989 SHTN1A0MZ66 631 aa17.14■□□□□ 0.33
SNF8-206ENST00000509989 RAD17O75943 681 aa17.14■□□□□ 0.33
SNF8-206ENST00000509989 TRIM27P14373 513 aa17.14■□□□□ 0.33
SNF8-206ENST00000509989 TXNRD3Q86VQ6 643 aa17.14■□□□□ 0.33
SNF8-206ENST00000509989 CLUAP1Q96AJ1 413 aa17.14■□□□□ 0.33
SNF8-206ENST00000509989 ANKIB1Q9P2G1 1089 aa17.14■□□□□ 0.33
SNF8-206ENST00000509989 ADAMTSL1Q8N6G6 1762 aa17.13■□□□□ 0.33
SNF8-206ENST00000509989 ANKRD18BA2A2Z9 1011 aa17.13■□□□□ 0.33
SNF8-206ENST00000509989 TAF5LO75529 589 aa17.13■□□□□ 0.33
SNF8-206ENST00000509989 VEGFAP15692 232 aaPredicted RBP17.13■□□□□ 0.33
SNF8-206ENST00000509989 WASHC4Q2M389 1173 aa17.13■□□□□ 0.33
SNF8-206ENST00000509989 SUPT20HQ8NEM7 779 aa17.13■□□□□ 0.33
SNF8-206ENST00000509989 KLHDC4Q8TBB5 520 aa17.13■□□□□ 0.33
SNF8-206ENST00000509989 MEIS3Q99687 375 aa17.13■□□□□ 0.33
SNF8-206ENST00000509989 TOMM70O94826 608 aa17.12■□□□□ 0.33
SNF8-206ENST00000509989 SCNN1DP51172 638 aa17.12■□□□□ 0.33
SNF8-206ENST00000509989 EIF6P56537 245 aaKnown RBP17.12■□□□□ 0.33
SNF8-206ENST00000509989 CHRNDQ07001 517 aa17.12■□□□□ 0.33
SNF8-206ENST00000509989 RABL6Q3YEC7 729 aaPredicted RBP17.12■□□□□ 0.33
SNF8-206ENST00000509989 L3MBTL3Q96JM7 780 aaPredicted RBP17.12■□□□□ 0.33
SNF8-206ENST00000509989 API5Q9BZZ5 524 aaKnown RBP17.12■□□□□ 0.33
SNF8-206ENST00000509989 GGA1Q9UJY5 639 aa17.12■□□□□ 0.33
SNF8-206ENST00000509989 ZNRF3Q9ULT6 936 aa17.12■□□□□ 0.33
SNF8-206ENST00000509989 ECE2O60344 883 aa17.11■□□□□ 0.33
SNF8-206ENST00000509989 RLBP1P12271 317 aa17.11■□□□□ 0.33
SNF8-206ENST00000509989 IGHMBP2P38935 993 aaKnown RBP17.11■□□□□ 0.33
SNF8-206ENST00000509989 EPS15P42566 896 aa17.11■□□□□ 0.33
SNF8-206ENST00000509989 IFIT5Q13325 482 aaKnown RBP17.11■□□□□ 0.33
SNF8-206ENST00000509989 GPC2Q8N158 579 aa17.11■□□□□ 0.33
SNF8-206ENST00000509989 TAF1DQ9H5J8 278 aaPredicted RBP17.11■□□□□ 0.33
SNF8-206ENST00000509989 XDHP47989 1333 aa17.11■□□□□ 0.33
SNF8-206ENST00000509989 CCT4P50991 539 aaKnown RBP17.1■□□□□ 0.33
SNF8-206ENST00000509989 INTS3Q68E01 1043 aaKnown RBP17.1■□□□□ 0.33
SNF8-206ENST00000509989 ATF7IPQ6VMQ6 1270 aa17.1■□□□□ 0.33
SNF8-206ENST00000509989 ARHGAP45Q92619 1136 aa17.1■□□□□ 0.33
SNF8-206ENST00000509989 VPS33BQ9H267 617 aa17.1■□□□□ 0.33
SNF8-206ENST00000509989 ZBTB12Q9Y330 459 aaPredicted RBP17.1■□□□□ 0.33
SNF8-206ENST00000509989 KIF16BQ96L93 1317 aa17.1■□□□□ 0.33
SNF8-206ENST00000509989 PSMD14O00487 310 aa17.09■□□□□ 0.33
SNF8-206ENST00000509989 RFX5P48382 616 aaPredicted RBP17.09■□□□□ 0.33
SNF8-206ENST00000509989 GMPSP49915 693 aaPredicted RBP17.09■□□□□ 0.33
SNF8-206ENST00000509989 LRRC24Q50LG9 513 aa17.09■□□□□ 0.33
SNF8-206ENST00000509989 TMEM57Q8N5G2 664 aa17.09■□□□□ 0.33
SNF8-206ENST00000509989 RBM46Q8TBY0 533 aaKnown RBP17.09■□□□□ 0.33
SNF8-206ENST00000509989 MPHOSPH8Q99549 860 aa17.09■□□□□ 0.33
SNF8-206ENST00000509989 IRS2Q9Y4H2 1338 aa17.09■□□□□ 0.33
SNF8-206ENST00000509989 POLR2AP24928 1970 aaKnown RBP17.09■□□□□ 0.33
SNF8-206ENST00000509989 PLIN1O60240 522 aa17.08■□□□□ 0.32
SNF8-206ENST00000509989 ATP2B4P23634 1241 aa17.08■□□□□ 0.32
SNF8-206ENST00000509989 HTRA3P83110 453 aa17.08■□□□□ 0.32
SNF8-206ENST00000509989 CCDC57Q2TAC2 916 aa17.08■□□□□ 0.32
SNF8-206ENST00000509989 CIAPIN1Q6FI81 312 aa17.08■□□□□ 0.32
SNF8-206ENST00000509989 ZC3H12CQ9C0D7 883 aaKnown RBP17.08■□□□□ 0.32
SNF8-206ENST00000509989 LRRFIP2Q9Y608 721 aaKnown RBP17.08■□□□□ 0.32
SNF8-206ENST00000509989 EPHX2P34913 555 aa17.07■□□□□ 0.32
SNF8-206ENST00000509989 LDHAL6AQ6ZMR3 332 aa17.07■□□□□ 0.32
SNF8-206ENST00000509989 C16orf71Q8IYS4 520 aaPredicted RBP17.07■□□□□ 0.32
SNF8-206ENST00000509989 EYA3Q99504 573 aa17.07■□□□□ 0.32
SNF8-206ENST00000509989 MXD3Q9BW11 206 aa17.07■□□□□ 0.32
SNF8-206ENST00000509989 HACL1Q9UJ83 578 aa17.07■□□□□ 0.32
SNF8-206ENST00000509989 ZNF804BA4D1E1 1349 aa17.06■□□□□ 0.32
SNF8-206ENST00000509989 EAPPQ56P03 285 aaPredicted RBP17.06■□□□□ 0.32
SNF8-206ENST00000509989 ZKSCAN2Q63HK3 967 aa17.06■□□□□ 0.32
SNF8-206ENST00000509989 YTHDC1Q96MU7 727 aaKnown RBP17.06■□□□□ 0.32
SNF8-206ENST00000509989 RIPOR2Q9Y4F9 1068 aa17.06■□□□□ 0.32
SNF8-206ENST00000509989 MED23Q9ULK4 1368 aa17.05■□□□□ 0.32
SNF8-206ENST00000509989 EGFRP00533 1210 aa17.05■□□□□ 0.32
SNF8-206ENST00000509989 UBTFL1P0CB47 393 aaPredicted RBP17.05■□□□□ 0.32
SNF8-206ENST00000509989 FMR1Q06787 632 aaKnown RBP eCLIP17.05■□□□□ 0.32
SNF8-206ENST00000509989 TAF7LQ5H9L4 462 aa17.05■□□□□ 0.32
SNF8-206ENST00000509989 CNNM1Q9NRU3 951 aa17.05■□□□□ 0.32
SNF8-206ENST00000509989 HIRAP54198 1017 aaPredicted RBP17.04■□□□□ 0.32
SNF8-206ENST00000509989 PANK1Q8TE04 598 aa17.04■□□□□ 0.32
SNF8-206ENST00000509989 ANKRD2Q9GZV1 360 aa17.04■□□□□ 0.32
SNF8-206ENST00000509989 GPRC5DQ9NZD1 345 aa17.04■□□□□ 0.32
SNF8-206ENST00000509989 PA2G4Q9UQ80 394 aaKnown RBP17.04■□□□□ 0.32
SNF8-206ENST00000509989 IPO8O15397 1037 aaKnown RBP17.03■□□□□ 0.32
SNF8-206ENST00000509989 HSPA6P17066 643 aa17.03■□□□□ 0.32
SNF8-206ENST00000509989 PTPN12Q05209 780 aaKnown RBP17.03■□□□□ 0.32
SNF8-206ENST00000509989 TRPM4Q8TD43 1214 aa17.03■□□□□ 0.32
SNF8-206ENST00000509989 LEMD3Q9Y2U8 911 aa17.03■□□□□ 0.32
SNF8-206ENST00000509989 IQCA1LA6NCM1 817 aa17.02■□□□□ 0.32
SNF8-206ENST00000509989 MAP1SQ66K74 1059 aaPredicted RBP17.02■□□□□ 0.32
SNF8-206ENST00000509989 SMC1BQ8NDV3 1235 aa17.02■□□□□ 0.32
SNF8-206ENST00000509989 C1orf115Q9H7X2 142 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms