RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 POLLQ9UGP5 575 aa21.37■■□□□ 1.01
CLDND1-219ENST00000508659 ZNRF3Q9ULT6 936 aa21.37■■□□□ 1.01
CLDND1-219ENST00000508659 GJA3Q9Y6H8 435 aa21.37■■□□□ 1.01
CLDND1-219ENST00000508659 SPEF2Q9C093 1822 aa21.36■■□□□ 1.01
CLDND1-219ENST00000508659 NBPF7P0C2Y1 421 aaPredicted RBP21.36■■□□□ 1.01
CLDND1-219ENST00000508659 LMBR1LQ6UX01 489 aa21.36■■□□□ 1.01
CLDND1-219ENST00000508659 RBM46Q8TBY0 533 aaKnown RBP21.36■■□□□ 1.01
CLDND1-219ENST00000508659 SUCLG2Q96I99 432 aa21.36■■□□□ 1.01
CLDND1-219ENST00000508659 CCDC57Q2TAC2 916 aa21.35■■□□□ 1.01
CLDND1-219ENST00000508659 EPHA10Q5JZY3 1008 aa21.35■■□□□ 1.01
CLDND1-219ENST00000508659 POTECB2RU33 542 aa21.34■■□□□ 1.01
CLDND1-219ENST00000508659 RIMBP2O15034 1052 aa21.34■■□□□ 1.01
CLDND1-219ENST00000508659 TAF7LQ5H9L4 462 aa21.34■■□□□ 1.01
CLDND1-219ENST00000508659 GPR101Q96P66 508 aaPredicted RBP21.34■■□□□ 1.01
CLDND1-219ENST00000508659 MINPP1Q9UNW1 487 aa21.34■■□□□ 1.01
CLDND1-219ENST00000508659 IPO8O15397 1037 aaKnown RBP21.33■■□□□ 1.01
CLDND1-219ENST00000508659 ATP2B4P23634 1241 aa21.33■■□□□ 1.01
CLDND1-219ENST00000508659 ARHGAP45Q92619 1136 aa21.33■■□□□ 1.01
CLDND1-219ENST00000508659 FRAT1Q92837 279 aaPredicted RBP21.33■■□□□ 1.01
CLDND1-219ENST00000508659 ZC3H12CQ9C0D7 883 aaKnown RBP21.33■■□□□ 1.01
CLDND1-219ENST00000508659 BICC1Q9H694 974 aaKnown RBP21.33■■□□□ 1.01
CLDND1-219ENST00000508659 HACL1Q9UJ83 578 aa21.33■■□□□ 1.01
CLDND1-219ENST00000508659 LMOD1P29536 600 aaPredicted RBP21.32■■□□□ 1
CLDND1-219ENST00000508659 SMC1BQ8NDV3 1235 aa21.32■■□□□ 1
CLDND1-219ENST00000508659 DBNDD1Q9H9R9 158 aa21.32■■□□□ 1
CLDND1-219ENST00000508659 G3V3G9 751 aa21.31■■□□□ 1
CLDND1-219ENST00000508659 ECE2O60344 883 aa21.31■■□□□ 1
CLDND1-219ENST00000508659 BCAR3O75815 825 aa21.31■■□□□ 1
CLDND1-219ENST00000508659 DCAF8Q5TAQ9 597 aa21.31■■□□□ 1
CLDND1-219ENST00000508659 CIAPIN1Q6FI81 312 aa21.31■■□□□ 1
CLDND1-219ENST00000508659 KAZALD1Q96I82 304 aa21.31■■□□□ 1
CLDND1-219ENST00000508659 ANKRD2Q9GZV1 360 aa21.31■■□□□ 1
CLDND1-219ENST00000508659 USP44Q9H0E7 712 aa21.31■■□□□ 1
CLDND1-219ENST00000508659 SCN4AP35499 1836 aa21.31■■□□□ 1
CLDND1-219ENST00000508659 RAD17O75943 681 aa21.3■■□□□ 1
CLDND1-219ENST00000508659 CXCL9Q07325 125 aa21.3■■□□□ 1
CLDND1-219ENST00000508659 FSTL1Q12841 308 aa21.3■■□□□ 1
CLDND1-219ENST00000508659 TAF1DQ9H5J8 278 aaPredicted RBP21.3■■□□□ 1
CLDND1-219ENST00000508659 MED23Q9ULK4 1368 aa21.3■■□□□ 1
CLDND1-219ENST00000508659 YDJCA8MPS7 323 aa21.29■■□□□ 1
CLDND1-219ENST00000508659 UBTFL1P0CB47 393 aaPredicted RBP21.29■■□□□ 1
CLDND1-219ENST00000508659 TRIM27P14373 513 aa21.29■■□□□ 1
CLDND1-219ENST00000508659 EPHX2P34913 555 aa21.29■■□□□ 1
CLDND1-219ENST00000508659 SCNN1DP51172 638 aa21.29■■□□□ 1
CLDND1-219ENST00000508659 CHRNDQ07001 517 aa21.29■■□□□ 1
CLDND1-219ENST00000508659 TNIP1Q15025 636 aa21.29■■□□□ 1
CLDND1-219ENST00000508659 DOK7Q18PE1 504 aa21.29■■□□□ 1
CLDND1-219ENST00000508659 RABL6Q3YEC7 729 aaPredicted RBP21.29■■□□□ 1
CLDND1-219ENST00000508659 ATF7IPQ6VMQ6 1270 aa21.29■■□□□ 1
CLDND1-219ENST00000508659 KCNJ4P48050 445 aa21.28■■□□□ 1
CLDND1-219ENST00000508659 EAPPQ56P03 285 aaPredicted RBP21.28■■□□□ 1
CLDND1-219ENST00000508659 ANKRD44Q8N8A2 993 aa21.28■■□□□ 1
CLDND1-219ENST00000508659 LEMD3Q9Y2U8 911 aa21.28■■□□□ 1
CLDND1-219ENST00000508659 HSPA6P17066 643 aa21.27■■□□□ 1
CLDND1-219ENST00000508659 ZKSCAN2Q63HK3 967 aa21.27■■□□□ 1
CLDND1-219ENST00000508659 LDHAL6AQ6ZMR3 332 aa21.27■■□□□ 1
CLDND1-219ENST00000508659 PNMA8AQ86V59 439 aaPredicted RBP21.27■■□□□ 1
CLDND1-219ENST00000508659 ZNF594Q96JF6 807 aaPredicted RBP21.27■■□□□ 1
CLDND1-219ENST00000508659 CNNM1Q9NRU3 951 aa21.27■■□□□ 1
CLDND1-219ENST00000508659 ZNF804BA4D1E1 1349 aa21.27■□□□□ 0.99
CLDND1-219ENST00000508659 GMPSP49915 693 aaPredicted RBP21.26■□□□□ 0.99
CLDND1-219ENST00000508659 LDHDQ86WU2 507 aa21.26■□□□□ 0.99
CLDND1-219ENST00000508659 POTEIP0CG38 1075 aa21.25■□□□□ 0.99
CLDND1-219ENST00000508659 POTEJP0CG39 1038 aa21.25■□□□□ 0.99
CLDND1-219ENST00000508659 INTS3Q68E01 1043 aaKnown RBP21.25■□□□□ 0.99
CLDND1-219ENST00000508659 GPRC5DQ9NZD1 345 aa21.25■□□□□ 0.99
CLDND1-219ENST00000508659 HDAC5Q9UQL6 1122 aa21.25■□□□□ 0.99
CLDND1-219ENST00000508659 PSMD14O00487 310 aa21.24■□□□□ 0.99
CLDND1-219ENST00000508659 CHADLQ6NUI6 762 aa21.24■□□□□ 0.99
CLDND1-219ENST00000508659 CLUAP1Q96AJ1 413 aa21.24■□□□□ 0.99
CLDND1-219ENST00000508659 MEIS3Q99687 375 aa21.24■□□□□ 0.99
CLDND1-219ENST00000508659 WTIPA6NIX2 430 aaPredicted RBP21.23■□□□□ 0.99
CLDND1-219ENST00000508659 EPS15P42566 896 aa21.23■□□□□ 0.99
CLDND1-219ENST00000508659 FTSJ3Q8IY81 847 aaKnown RBP21.23■□□□□ 0.99
CLDND1-219ENST00000508659 TAF5LO75529 589 aa21.22■□□□□ 0.99
CLDND1-219ENST00000508659 HELBQ8NG08 1087 aaPredicted RBP21.22■□□□□ 0.99
CLDND1-219ENST00000508659 ADARB2Q9NS39 739 aaKnown RBP21.22■□□□□ 0.99
CLDND1-219ENST00000508659 TNNQ9UQP3 1299 aa21.22■□□□□ 0.99
CLDND1-219ENST00000508659 CLEC11AQ9Y240 323 aa21.22■□□□□ 0.99
CLDND1-219ENST00000508659 A0A1B0GUL6 1792 aa21.22■□□□□ 0.99
CLDND1-219ENST00000508659 ADAMTSL1Q8N6G6 1762 aa21.21■□□□□ 0.99
CLDND1-219ENST00000508659 GNAI3P08754 354 aa21.21■□□□□ 0.99
CLDND1-219ENST00000508659 RPS12P25398 132 aaKnown RBP21.21■□□□□ 0.99
CLDND1-219ENST00000508659 KLRK1P26718 216 aa21.21■□□□□ 0.99
CLDND1-219ENST00000508659 PODNQ7Z5L7 613 aa21.21■□□□□ 0.99
CLDND1-219ENST00000508659 COA1Q9GZY4 146 aa21.21■□□□□ 0.99
CLDND1-219ENST00000508659 ZBTB12Q9Y330 459 aaPredicted RBP21.21■□□□□ 0.99
CLDND1-219ENST00000508659 LRRFIP2Q9Y608 721 aaKnown RBP21.21■□□□□ 0.99
CLDND1-219ENST00000508659 PLIN1O60240 522 aa21.2■□□□□ 0.98
CLDND1-219ENST00000508659 APLP1P51693 650 aa21.2■□□□□ 0.98
CLDND1-219ENST00000508659 USP50Q70EL3 339 aaPredicted RBP21.2■□□□□ 0.98
CLDND1-219ENST00000508659 MICALL2Q8IY33 904 aa21.2■□□□□ 0.98
CLDND1-219ENST00000508659 PUS3Q9BZE2 481 aaKnown RBP21.2■□□□□ 0.98
CLDND1-219ENST00000508659 KCNQ5Q9NR82 932 aa21.2■□□□□ 0.98
CLDND1-219ENST00000508659 MROH5Q6ZUA9 1318 aa21.2■□□□□ 0.98
CLDND1-219ENST00000508659 TXNRD3Q86VQ6 643 aa21.19■□□□□ 0.98
CLDND1-219ENST00000508659 TMEM57Q8N5G2 664 aa21.19■□□□□ 0.98
CLDND1-219ENST00000508659 SNAP23O00161 211 aa21.18■□□□□ 0.98
CLDND1-219ENST00000508659 METTL24Q5JXM2 366 aa21.18■□□□□ 0.98
CLDND1-219ENST00000508659 KLHDC4Q8TBB5 520 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms