RNA–Protein interactions for RNA: ENST00000506909.5

PDCD6-204, Transcript of programmed cell death 6, humanhuman

TSL 3

Gene PDCD6, Length 458 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-204ENST00000506909 L3MBTL3Q96JM7 780 aaPredicted RBP17.11■□□□□ 0.33
PDCD6-204ENST00000506909 USP44Q9H0E7 712 aa17.11■□□□□ 0.33
PDCD6-204ENST00000506909 ZNF541Q9H0D2 1346 aa17.11■□□□□ 0.33
PDCD6-204ENST00000506909 ANKRD18BA2A2Z9 1011 aa17.1■□□□□ 0.33
PDCD6-204ENST00000506909 C6orf229H3BNL8 230 aa17.1■□□□□ 0.33
PDCD6-204ENST00000506909 IPO8O15397 1037 aaKnown RBP17.1■□□□□ 0.33
PDCD6-204ENST00000506909 BCAR3O75815 825 aa17.1■□□□□ 0.33
PDCD6-204ENST00000506909 EIF6P56537 245 aaKnown RBP17.1■□□□□ 0.33
PDCD6-204ENST00000506909 IFIT5Q13325 482 aaKnown RBP17.1■□□□□ 0.33
PDCD6-204ENST00000506909 WASHC4Q2M389 1173 aa17.1■□□□□ 0.33
PDCD6-204ENST00000506909 GPC2Q8N158 579 aa17.1■□□□□ 0.33
PDCD6-204ENST00000506909 DNAJC5GQ8N7S2 189 aa17.1■□□□□ 0.33
PDCD6-204ENST00000506909 KAZALD1Q96I82 304 aa17.1■□□□□ 0.33
PDCD6-204ENST00000506909 SUCLG2Q96I99 432 aa17.1■□□□□ 0.33
PDCD6-204ENST00000506909 EYA3Q99504 573 aa17.1■□□□□ 0.33
PDCD6-204ENST00000506909 ANKIB1Q9P2G1 1089 aa17.1■□□□□ 0.33
PDCD6-204ENST00000506909 MINPP1Q9UNW1 487 aa17.1■□□□□ 0.33
PDCD6-204ENST00000506909 XDHP47989 1333 aa17.1■□□□□ 0.33
PDCD6-204ENST00000506909 APLP1P51693 650 aa17.09■□□□□ 0.33
PDCD6-204ENST00000506909 MPHOSPH8Q99549 860 aa17.09■□□□□ 0.33
PDCD6-204ENST00000506909 GGA1Q9UJY5 639 aa17.09■□□□□ 0.33
PDCD6-204ENST00000506909 ZNRF3Q9ULT6 936 aa17.09■□□□□ 0.33
PDCD6-204ENST00000506909 PSME4Q14997 1843 aa17.09■□□□□ 0.33
PDCD6-204ENST00000506909 RABL6Q3YEC7 729 aaPredicted RBP17.08■□□□□ 0.32
PDCD6-204ENST00000506909 C16orf71Q8IYS4 520 aaPredicted RBP17.08■□□□□ 0.32
PDCD6-204ENST00000506909 CHMP3Q9Y3E7 222 aa17.08■□□□□ 0.32
PDCD6-204ENST00000506909 SCN9AQ15858 1988 aa17.08■□□□□ 0.32
PDCD6-204ENST00000506909 IQCA1LA6NCM1 817 aa17.07■□□□□ 0.32
PDCD6-204ENST00000506909 UFL1O94874 794 aa17.07■□□□□ 0.32
PDCD6-204ENST00000506909 ATP2B4P23634 1241 aa17.07■□□□□ 0.32
PDCD6-204ENST00000506909 CCDC57Q2TAC2 916 aa17.07■□□□□ 0.32
PDCD6-204ENST00000506909 INTS3Q68E01 1043 aaKnown RBP17.07■□□□□ 0.32
PDCD6-204ENST00000506909 ATF7IPQ6VMQ6 1270 aa17.07■□□□□ 0.32
PDCD6-204ENST00000506909 RBM46Q8TBY0 533 aaKnown RBP17.07■□□□□ 0.32
PDCD6-204ENST00000506909 ZC3H12CQ9C0D7 883 aaKnown RBP17.07■□□□□ 0.32
PDCD6-204ENST00000506909 TRIM27P14373 513 aa17.06■□□□□ 0.32
PDCD6-204ENST00000506909 CXCL9Q07325 125 aa17.06■□□□□ 0.32
PDCD6-204ENST00000506909 ANKRD2Q9GZV1 360 aa17.06■□□□□ 0.32
PDCD6-204ENST00000506909 BICC1Q9H694 974 aaKnown RBP17.06■□□□□ 0.32
PDCD6-204ENST00000506909 RIMBP2O15034 1052 aa17.05■□□□□ 0.32
PDCD6-204ENST00000506909 ANKRD44Q8N8A2 993 aa17.05■□□□□ 0.32
PDCD6-204ENST00000506909 FRAT1Q92837 279 aaPredicted RBP17.05■□□□□ 0.32
PDCD6-204ENST00000506909 HDAC5Q9UQL6 1122 aa17.05■□□□□ 0.32
PDCD6-204ENST00000506909 LEMD3Q9Y2U8 911 aa17.05■□□□□ 0.32
PDCD6-204ENST00000506909 YDJCA8MPS7 323 aa17.04■□□□□ 0.32
PDCD6-204ENST00000506909 CHRNDQ07001 517 aa17.04■□□□□ 0.32
PDCD6-204ENST00000506909 ZKSCAN2Q63HK3 967 aa17.04■□□□□ 0.32
PDCD6-204ENST00000506909 CIAPIN1Q6FI81 312 aa17.04■□□□□ 0.32
PDCD6-204ENST00000506909 GJA3Q9Y6H8 435 aa17.04■□□□□ 0.32
PDCD6-204ENST00000506909 UBTFL1P0CB47 393 aaPredicted RBP17.03■□□□□ 0.32
PDCD6-204ENST00000506909 TNIP1Q15025 636 aa17.03■□□□□ 0.32
PDCD6-204ENST00000506909 TAF7LQ5H9L4 462 aa17.03■□□□□ 0.32
PDCD6-204ENST00000506909 LDHAL6AQ6ZMR3 332 aa17.03■□□□□ 0.32
PDCD6-204ENST00000506909 GPR101Q96P66 508 aaPredicted RBP17.03■□□□□ 0.32
PDCD6-204ENST00000506909 DBNDD1Q9H9R9 158 aa17.03■□□□□ 0.32
PDCD6-204ENST00000506909 HACL1Q9UJ83 578 aa17.03■□□□□ 0.32
PDCD6-204ENST00000506909 MED23Q9ULK4 1368 aa17.02■□□□□ 0.32
PDCD6-204ENST00000506909 ECE2O60344 883 aa17.02■□□□□ 0.32
PDCD6-204ENST00000506909 FSTL1Q12841 308 aa17.02■□□□□ 0.32
PDCD6-204ENST00000506909 ZNF594Q96JF6 807 aaPredicted RBP17.02■□□□□ 0.32
PDCD6-204ENST00000506909 TAF1DQ9H5J8 278 aaPredicted RBP17.02■□□□□ 0.32
PDCD6-204ENST00000506909 ADAMTSL1Q8N6G6 1762 aa17.02■□□□□ 0.31
PDCD6-204ENST00000506909 ZNF804BA4D1E1 1349 aa17.01■□□□□ 0.31
PDCD6-204ENST00000506909 WTIPA6NIX2 430 aaPredicted RBP17.01■□□□□ 0.31
PDCD6-204ENST00000506909 G3V3G9 751 aa17.01■□□□□ 0.31
PDCD6-204ENST00000506909 RAD17O75943 681 aa17.01■□□□□ 0.31
PDCD6-204ENST00000506909 SCNN1DP51172 638 aa17.01■□□□□ 0.31
PDCD6-204ENST00000506909 DOK7Q18PE1 504 aa17.01■□□□□ 0.31
PDCD6-204ENST00000506909 DCAF8Q5TAQ9 597 aa17.01■□□□□ 0.31
PDCD6-204ENST00000506909 SMC1BQ8NDV3 1235 aa17.01■□□□□ 0.31
PDCD6-204ENST00000506909 TNNQ9UQP3 1299 aa17.01■□□□□ 0.31
PDCD6-204ENST00000506909 ZNF646O15015 1829 aaPredicted RBP17■□□□□ 0.31
PDCD6-204ENST00000506909 GNAI3P08754 354 aa17■□□□□ 0.31
PDCD6-204ENST00000506909 LMOD1P29536 600 aaPredicted RBP17■□□□□ 0.31
PDCD6-204ENST00000506909 EPHX2P34913 555 aa17■□□□□ 0.31
PDCD6-204ENST00000506909 PODNQ7Z5L7 613 aa17■□□□□ 0.31
PDCD6-204ENST00000506909 PNMA8AQ86V59 439 aaPredicted RBP17■□□□□ 0.31
PDCD6-204ENST00000506909 CLUAP1Q96AJ1 413 aa17■□□□□ 0.31
PDCD6-204ENST00000506909 MEIS3Q99687 375 aa17■□□□□ 0.31
PDCD6-204ENST00000506909 CNNM1Q9NRU3 951 aa17■□□□□ 0.31
PDCD6-204ENST00000506909 C15orf52Q6ZUT6 534 aaKnown RBP16.99■□□□□ 0.31
PDCD6-204ENST00000506909 GPRC5DQ9NZD1 345 aa16.99■□□□□ 0.31
PDCD6-204ENST00000506909 RIPOR2Q9Y4F9 1068 aa16.99■□□□□ 0.31
PDCD6-204ENST00000506909 PSMD14O00487 310 aa16.98■□□□□ 0.31
PDCD6-204ENST00000506909 TAF5LO75529 589 aa16.98■□□□□ 0.31
PDCD6-204ENST00000506909 EPS15P42566 896 aa16.98■□□□□ 0.31
PDCD6-204ENST00000506909 KCNJ4P48050 445 aa16.98■□□□□ 0.31
PDCD6-204ENST00000506909 HELBQ8NG08 1087 aaPredicted RBP16.98■□□□□ 0.31
PDCD6-204ENST00000506909 DPF2Q92785 391 aa16.98■□□□□ 0.31
PDCD6-204ENST00000506909 PUS3Q9BZE2 481 aaKnown RBP16.98■□□□□ 0.31
PDCD6-204ENST00000506909 COA1Q9GZY4 146 aa16.98■□□□□ 0.31
PDCD6-204ENST00000506909 KCNQ5Q9NR82 932 aa16.98■□□□□ 0.31
PDCD6-204ENST00000506909 LRRFIP2Q9Y608 721 aaKnown RBP16.98■□□□□ 0.31
PDCD6-204ENST00000506909 POLR2AP24928 1970 aaKnown RBP16.98■□□□□ 0.31
PDCD6-204ENST00000506909 VIL1P09327 827 aaKnown RBP16.97■□□□□ 0.31
PDCD6-204ENST00000506909 RPS12P25398 132 aaKnown RBP16.97■□□□□ 0.31
PDCD6-204ENST00000506909 RFX5P48382 616 aaPredicted RBP16.97■□□□□ 0.31
PDCD6-204ENST00000506909 GMPSP49915 693 aaPredicted RBP16.97■□□□□ 0.31
PDCD6-204ENST00000506909 TXNRD3Q86VQ6 643 aa16.97■□□□□ 0.31
PDCD6-204ENST00000506909 LDHDQ86WU2 507 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms