RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 SMIM5Q71RC9 77 aa11.24□□□□□ -0.61
PHF3-208ENST00000506783 TMC6Q7Z403 805 aa11.24□□□□□ -0.61
PHF3-208ENST00000506783 UTRNP46939 3433 aa11.24□□□□□ -0.61
PHF3-208ENST00000506783 COL3A1P02461 1466 aaPredicted RBP11.24□□□□□ -0.61
PHF3-208ENST00000506783 USP6P35125 1406 aa11.24□□□□□ -0.61
PHF3-208ENST00000506783 BAZ2BQ9UIF8 2168 aaKnown RBP11.24□□□□□ -0.61
PHF3-208ENST00000506783 NEXMIFQ5QGS0 1516 aa11.24□□□□□ -0.61
PHF3-208ENST00000506783 ADORA1P30542 326 aa11.24□□□□□ -0.61
PHF3-208ENST00000506783 GCKRQ14397 625 aa11.24□□□□□ -0.61
PHF3-208ENST00000506783 FAM182BQ5T319 152 aa11.24□□□□□ -0.61
PHF3-208ENST00000506783 USP28Q96RU2 1077 aa11.24□□□□□ -0.61
PHF3-208ENST00000506783 TCHHQ07283 1943 aa11.24□□□□□ -0.61
PHF3-208ENST00000506783 SERPINC1P01008 464 aa11.24□□□□□ -0.61
PHF3-208ENST00000506783 METTL24Q5JXM2 366 aa11.24□□□□□ -0.61
PHF3-208ENST00000506783 ZSCAN31Q96LW9 406 aaPredicted RBP11.24□□□□□ -0.61
PHF3-208ENST00000506783 BCL2L12Q9HB09 334 aa11.24□□□□□ -0.61
PHF3-208ENST00000506783 RAD21O60216 631 aa11.23□□□□□ -0.61
PHF3-208ENST00000506783 RPS6KB1P23443 525 aa11.23□□□□□ -0.61
PHF3-208ENST00000506783 TNNI3KQ59H18 835 aa11.23□□□□□ -0.61
PHF3-208ENST00000506783 RASSF8Q8NHQ8 419 aa11.23□□□□□ -0.61
PHF3-208ENST00000506783 FAM200AQ8TCP9 573 aa11.23□□□□□ -0.61
PHF3-208ENST00000506783 STAMQ92783 540 aa11.23□□□□□ -0.61
PHF3-208ENST00000506783 ORC3Q9UBD5 711 aaPredicted RBP11.23□□□□□ -0.61
PHF3-208ENST00000506783 FPGT-TNNI3KV9GXZ4 949 aa11.23□□□□□ -0.61
PHF3-208ENST00000506783 RICTORQ6R327 1708 aa11.23□□□□□ -0.61
PHF3-208ENST00000506783 KIAA0232Q92628 1395 aa11.23□□□□□ -0.61
PHF3-208ENST00000506783 SKILP12757 684 aa11.23□□□□□ -0.61
PHF3-208ENST00000506783 C11orf57Q6ZUT1 292 aaPredicted RBP11.23□□□□□ -0.61
PHF3-208ENST00000506783 MIGA1Q8NAN2 632 aa11.23□□□□□ -0.61
PHF3-208ENST00000506783 RNF216Q9NWF9 866 aaPredicted RBP11.23□□□□□ -0.61
PHF3-208ENST00000506783 PIK3C2BO00750 1634 aa11.23□□□□□ -0.61
PHF3-208ENST00000506783 CRB1P82279 1406 aa11.23□□□□□ -0.61
PHF3-208ENST00000506783 NEURL1BA8MQ27 555 aa11.23□□□□□ -0.61
PHF3-208ENST00000506783 UBE2Q2LH0YL09 131 aa11.23□□□□□ -0.61
PHF3-208ENST00000506783 TAF5LO75529 589 aa11.23□□□□□ -0.61
PHF3-208ENST00000506783 SCRN1Q12765 414 aa11.23□□□□□ -0.61
PHF3-208ENST00000506783 C8orf76Q96K31 380 aa11.23□□□□□ -0.61
PHF3-208ENST00000506783 HINFPQ9BQA5 517 aa11.23□□□□□ -0.61
PHF3-208ENST00000506783 SH2B1Q9NRF2 756 aaPredicted RBP11.23□□□□□ -0.61
PHF3-208ENST00000506783 STAP2Q9UGK3 403 aa11.23□□□□□ -0.61
PHF3-208ENST00000506783 LAMC1P11047 1609 aa11.23□□□□□ -0.61
PHF3-208ENST00000506783 CFAP100Q494V2 611 aa11.22□□□□□ -0.61
PHF3-208ENST00000506783 LDHAL6AQ6ZMR3 332 aa11.22□□□□□ -0.61
PHF3-208ENST00000506783 SIRT1Q96EB6 747 aa11.22□□□□□ -0.61
PHF3-208ENST00000506783 DDX21Q9NR30 783 aaKnown RBP eCLIP11.22□□□□□ -0.61
PHF3-208ENST00000506783 POLR3GO15318 223 aaPredicted RBP11.22□□□□□ -0.61
PHF3-208ENST00000506783 ERCC3P19447 782 aa11.22□□□□□ -0.61
PHF3-208ENST00000506783 ADD1P35611 737 aaKnown RBP11.22□□□□□ -0.61
PHF3-208ENST00000506783 PDE4CQ08493 712 aa11.22□□□□□ -0.61
PHF3-208ENST00000506783 BRINP3Q76B58 766 aa11.22□□□□□ -0.61
PHF3-208ENST00000506783 UIMC1Q96RL1 719 aa11.22□□□□□ -0.61
PHF3-208ENST00000506783 SCAND2PQ9GZW5 306 aaPredicted RBP11.22□□□□□ -0.61
PHF3-208ENST00000506783 LMTK2Q8IWU2 1503 aa11.22□□□□□ -0.61
PHF3-208ENST00000506783 MROH1Q8NDA8 1641 aa11.22□□□□□ -0.61
PHF3-208ENST00000506783 A0A1B0GUL7 405 aa11.22□□□□□ -0.61
PHF3-208ENST00000506783 HTATSF1O43719 755 aaKnown RBP11.22□□□□□ -0.61
PHF3-208ENST00000506783 MCMDC2Q4G0Z9 681 aa11.22□□□□□ -0.61
PHF3-208ENST00000506783 PAG1Q9NWQ8 432 aa11.22□□□□□ -0.61
PHF3-208ENST00000506783 ADAMTS13Q76LX8 1427 aa11.22□□□□□ -0.61
PHF3-208ENST00000506783 MED14O60244 1454 aa11.21□□□□□ -0.61
PHF3-208ENST00000506783 USP27XA6NNY8 438 aa11.21□□□□□ -0.61
PHF3-208ENST00000506783 ZNF827Q17R98 1081 aa11.21□□□□□ -0.61
PHF3-208ENST00000506783 CCDC158Q5M9N0 1113 aa11.21□□□□□ -0.61
PHF3-208ENST00000506783 KAZALD1Q96I82 304 aa11.21□□□□□ -0.61
PHF3-208ENST00000506783 PGBD1Q96JS3 809 aa11.21□□□□□ -0.61
PHF3-208ENST00000506783 TTC14Q96N46 770 aa11.21□□□□□ -0.61
PHF3-208ENST00000506783 ZSWIM6Q9HCJ5 1215 aa11.21□□□□□ -0.61
PHF3-208ENST00000506783 MRVI1Q9Y6F6 885 aa11.21□□□□□ -0.61
PHF3-208ENST00000506783 RGS12O14924 1447 aa11.21□□□□□ -0.61
PHF3-208ENST00000506783 CACTINQ8WUQ7 758 aaKnown RBP11.21□□□□□ -0.61
PHF3-208ENST00000506783 HDAC5Q9UQL6 1122 aa11.21□□□□□ -0.61
PHF3-208ENST00000506783 RPAP1Q9BWH6 1393 aaPredicted RBP11.21□□□□□ -0.62
PHF3-208ENST00000506783 PRDM1O75626 825 aa11.21□□□□□ -0.62
PHF3-208ENST00000506783 STX17P56962 302 aa11.21□□□□□ -0.62
PHF3-208ENST00000506783 ST3GAL1Q11201 340 aa11.21□□□□□ -0.62
PHF3-208ENST00000506783 NECTIN1Q15223 517 aa11.21□□□□□ -0.62
PHF3-208ENST00000506783 PTPRUQ92729 1446 aa11.21□□□□□ -0.62
PHF3-208ENST00000506783 AATKQ6ZMQ8 1374 aa11.2□□□□□ -0.62
PHF3-208ENST00000506783 EXOC5O00471 708 aa11.2□□□□□ -0.62
PHF3-208ENST00000506783 TOB2Q14106 344 aaPredicted RBP11.2□□□□□ -0.62
PHF3-208ENST00000506783 CCDC144BQ3MJ40 725 aa11.2□□□□□ -0.62
PHF3-208ENST00000506783 CLIC6Q96NY7 704 aa11.2□□□□□ -0.62
PHF3-208ENST00000506783 KCNF1Q9H3M0 494 aa11.2□□□□□ -0.62
PHF3-208ENST00000506783 IFNKQ9P0W0 207 aa11.2□□□□□ -0.62
PHF3-208ENST00000506783 NCOA3Q9Y6Q9 1424 aa11.2□□□□□ -0.62
PHF3-208ENST00000506783 CPSF1Q10570 1443 aaKnown RBP11.2□□□□□ -0.62
PHF3-208ENST00000506783 SNRPA1P09661 255 aaKnown RBP11.2□□□□□ -0.62
PHF3-208ENST00000506783 DHX8Q14562 1220 aaKnown RBP11.2□□□□□ -0.62
PHF3-208ENST00000506783 PTPN14Q15678 1187 aa11.2□□□□□ -0.62
PHF3-208ENST00000506783 SLC9C2Q5TAH2 1124 aa11.2□□□□□ -0.62
PHF3-208ENST00000506783 AGLP35573 1532 aa11.2□□□□□ -0.62
PHF3-208ENST00000506783 ADCY9O60503 1353 aa11.2□□□□□ -0.62
PHF3-208ENST00000506783 ZAP70P43403 619 aa11.2□□□□□ -0.62
PHF3-208ENST00000506783 ANKRD1Q15327 319 aa11.2□□□□□ -0.62
PHF3-208ENST00000506783 ATP2B3Q16720 1220 aa11.2□□□□□ -0.62
PHF3-208ENST00000506783 AMOTQ4VCS5 1084 aa11.2□□□□□ -0.62
PHF3-208ENST00000506783 MAP4K1Q92918 833 aa11.2□□□□□ -0.62
PHF3-208ENST00000506783 PDLIM2Q96JY6 352 aa11.2□□□□□ -0.62
PHF3-208ENST00000506783 EPC1Q9H2F5 836 aa11.2□□□□□ -0.62
PHF3-208ENST00000506783 CFAP45Q9UL16 551 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms