RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 CYP46A1Q9Y6A2 500 aa26.65■■□□□ 1.86
RNF4-207ENST00000506706 SH3TC1Q8TE82 1336 aa26.65■■□□□ 1.86
RNF4-207ENST00000506706 TTC39AQ5SRH9 613 aa26.64■■□□□ 1.86
RNF4-207ENST00000506706 UTP14AQ9BVJ6 771 aaKnown RBP26.64■■□□□ 1.86
RNF4-207ENST00000506706 RIC1Q4ADV7 1423 aa26.64■■□□□ 1.86
RNF4-207ENST00000506706 VPS53Q5VIR6 699 aa26.64■■□□□ 1.85
RNF4-207ENST00000506706 LIMCH1Q9UPQ0 1083 aa26.64■■□□□ 1.85
RNF4-207ENST00000506706 PKP1Q13835 747 aa26.63■■□□□ 1.85
RNF4-207ENST00000506706 HMG20BQ9P0W2 317 aa26.63■■□□□ 1.85
RNF4-207ENST00000506706 GOLGA6L22H0YM25 854 aa26.62■■□□□ 1.85
RNF4-207ENST00000506706 BAG4O95429 457 aaKnown RBP26.62■■□□□ 1.85
RNF4-207ENST00000506706 PSMA5P28066 241 aa26.62■■□□□ 1.85
RNF4-207ENST00000506706 ADORA1P30542 326 aa26.62■■□□□ 1.85
RNF4-207ENST00000506706 RUFY3Q7L099 469 aa26.62■■□□□ 1.85
RNF4-207ENST00000506706 PDRG1Q9NUG6 133 aa26.62■■□□□ 1.85
RNF4-207ENST00000506706 CPA1P15085 419 aa26.62■■□□□ 1.85
RNF4-207ENST00000506706 HELLSQ9NRZ9 838 aa26.62■■□□□ 1.85
RNF4-207ENST00000506706 ATP2B3Q16720 1220 aa26.61■■□□□ 1.85
RNF4-207ENST00000506706 USPL1Q5W0Q7 1092 aa26.61■■□□□ 1.85
RNF4-207ENST00000506706 RPAP1Q9BWH6 1393 aaPredicted RBP26.61■■□□□ 1.85
RNF4-207ENST00000506706 SEC62Q99442 399 aaKnown RBP26.61■■□□□ 1.85
RNF4-207ENST00000506706 ZNF652Q9Y2D9 606 aa26.61■■□□□ 1.85
RNF4-207ENST00000506706 CHGBP05060 677 aa26.6■■□□□ 1.85
RNF4-207ENST00000506706 NIP7Q9Y221 180 aaKnown RBP eCLIP26.6■■□□□ 1.85
RNF4-207ENST00000506706 TSGA10IPQ3SY00 556 aa26.59■■□□□ 1.85
RNF4-207ENST00000506706 LINC00116Q8NCU8 138 aa26.59■■□□□ 1.85
RNF4-207ENST00000506706 ABCC12Q96J65 1359 aa26.59■■□□□ 1.85
RNF4-207ENST00000506706 THSD7AQ9UPZ6 1657 aa26.59■■□□□ 1.85
RNF4-207ENST00000506706 FAM177BA6PVY3 158 aa26.59■■□□□ 1.85
RNF4-207ENST00000506706 HSP90B1P14625 803 aaKnown RBP26.59■■□□□ 1.85
RNF4-207ENST00000506706 CCDC129Q6ZRS4 1044 aa26.59■■□□□ 1.85
RNF4-207ENST00000506706 ZDHHC9Q9Y397 364 aa26.59■■□□□ 1.85
RNF4-207ENST00000506706 U3KPZ7 1027 aaPredicted RBP26.59■■□□□ 1.85
RNF4-207ENST00000506706 HCLS1P14317 486 aaPredicted RBP26.58■■□□□ 1.85
RNF4-207ENST00000506706 FKBP4Q02790 459 aaKnown RBP eCLIP26.58■■□□□ 1.85
RNF4-207ENST00000506706 LRRFIP1Q32MZ4 808 aaKnown RBP26.58■■□□□ 1.85
RNF4-207ENST00000506706 ZMYM1Q5SVZ6 1142 aa26.58■■□□□ 1.85
RNF4-207ENST00000506706 VGLL2Q8N8G2 317 aa26.58■■□□□ 1.85
RNF4-207ENST00000506706 SKOR2Q2VWA4 1001 aaPredicted RBP26.58■■□□□ 1.84
RNF4-207ENST00000506706 BCORQ6W2J9 1755 aa26.58■■□□□ 1.84
RNF4-207ENST00000506706 RNF113AO15541 343 aaKnown RBP26.57■■□□□ 1.84
RNF4-207ENST00000506706 CLEC4GQ6UXB4 293 aa26.57■■□□□ 1.84
RNF4-207ENST00000506706 ZSCAN31Q96LW9 406 aaPredicted RBP26.57■■□□□ 1.84
RNF4-207ENST00000506706 LRP5O75197 1615 aa26.56■■□□□ 1.84
RNF4-207ENST00000506706 PDE8BO95263 885 aa26.56■■□□□ 1.84
RNF4-207ENST00000506706 NTSR2O95665 410 aa26.56■■□□□ 1.84
RNF4-207ENST00000506706 KRT32Q14532 448 aa26.56■■□□□ 1.84
RNF4-207ENST00000506706 CNTNAP4Q9C0A0 1308 aa26.56■■□□□ 1.84
RNF4-207ENST00000506706 BLOC1S2Q6QNY1 142 aa26.56■■□□□ 1.84
RNF4-207ENST00000506706 MEX3CQ5U5Q3 659 aaKnown RBP26.55■■□□□ 1.84
RNF4-207ENST00000506706 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.55■■□□□ 1.84
RNF4-207ENST00000506706 DDX60Q8IY21 1712 aaKnown RBP26.55■■□□□ 1.84
RNF4-207ENST00000506706 MROH5Q6ZUA9 1318 aa26.55■■□□□ 1.84
RNF4-207ENST00000506706 CERKQ8TCT0 537 aa26.54■■□□□ 1.84
RNF4-207ENST00000506706 LARP6Q9BRS8 491 aaKnown RBP26.54■■□□□ 1.84
RNF4-207ENST00000506706 SH2B1Q9NRF2 756 aaPredicted RBP26.54■■□□□ 1.84
RNF4-207ENST00000506706 LAMB2P55268 1798 aa26.54■■□□□ 1.84
RNF4-207ENST00000506706 CCDC152Q4G0S7 254 aa26.54■■□□□ 1.84
RNF4-207ENST00000506706 BTAF1O14981 1849 aa26.53■■□□□ 1.84
RNF4-207ENST00000506706 BRD1O95696 1058 aa26.53■■□□□ 1.84
RNF4-207ENST00000506706 PTF1AQ7RTS3 328 aa26.53■■□□□ 1.84
RNF4-207ENST00000506706 ZNF512BQ96KM6 892 aaPredicted RBP26.53■■□□□ 1.84
RNF4-207ENST00000506706 NHSQ6T4R5 1651 aa26.53■■□□□ 1.84
RNF4-207ENST00000506706 ZFYP08048 801 aaPredicted RBP26.53■■□□□ 1.84
RNF4-207ENST00000506706 RPS6KB1P23443 525 aa26.53■■□□□ 1.84
RNF4-207ENST00000506706 SCARF1Q14162 830 aa26.53■■□□□ 1.84
RNF4-207ENST00000506706 MCTP1Q6DN14 999 aa26.53■■□□□ 1.84
RNF4-207ENST00000506706 DSCC1Q9BVC3 393 aa26.53■■□□□ 1.84
RNF4-207ENST00000506706 ALDH8A1Q9H2A2 487 aaPredicted RBP26.53■■□□□ 1.84
RNF4-207ENST00000506706 ZAP70P43403 619 aa26.52■■□□□ 1.84
RNF4-207ENST00000506706 SLFNL1Q499Z3 407 aa26.52■■□□□ 1.84
RNF4-207ENST00000506706 TAF6LQ9Y6J9 622 aa26.52■■□□□ 1.84
RNF4-207ENST00000506706 RTL9Q8NET4 1388 aa26.52■■□□□ 1.84
RNF4-207ENST00000506706 KCNQ4P56696 695 aa26.51■■□□□ 1.83
RNF4-207ENST00000506706 ANKRD1Q15327 319 aa26.51■■□□□ 1.83
RNF4-207ENST00000506706 GJD4Q96KN9 370 aaPredicted RBP26.51■■□□□ 1.83
RNF4-207ENST00000506706 MPHOSPH8Q99549 860 aa26.51■■□□□ 1.83
RNF4-207ENST00000506706 RGL2O15211 777 aa26.51■■□□□ 1.83
RNF4-207ENST00000506706 PUM3Q15397 648 aaKnown RBP26.51■■□□□ 1.83
RNF4-207ENST00000506706 RC3H1Q5TC82 1133 aaKnown RBP26.51■■□□□ 1.83
RNF4-207ENST00000506706 GZF1Q9H116 711 aaPredicted RBP26.51■■□□□ 1.83
RNF4-207ENST00000506706 MAST3O60307 1309 aa26.51■■□□□ 1.83
RNF4-207ENST00000506706 LARGE1O95461 756 aa26.5■■□□□ 1.83
RNF4-207ENST00000506706 LPIN2Q92539 896 aa26.5■■□□□ 1.83
RNF4-207ENST00000506706 SEC31BQ9NQW1 1179 aa26.5■■□□□ 1.83
RNF4-207ENST00000506706 MCAMP43121 646 aa26.49■■□□□ 1.83
RNF4-207ENST00000506706 CYP21A2P08686 494 aa26.48■■□□□ 1.83
RNF4-207ENST00000506706 NEK1Q96PY6 1258 aa26.48■■□□□ 1.83
RNF4-207ENST00000506706 SMC3Q9UQE7 1217 aa26.48■■□□□ 1.83
RNF4-207ENST00000506706 FGFR2P21802 821 aa26.48■■□□□ 1.83
RNF4-207ENST00000506706 IGHMBP2P38935 993 aaKnown RBP26.48■■□□□ 1.83
RNF4-207ENST00000506706 AKAP11Q9UKA4 1901 aa26.47■■□□□ 1.83
RNF4-207ENST00000506706 ARAP2Q8WZ64 1704 aa26.47■■□□□ 1.83
RNF4-207ENST00000506706 WDR33Q9C0J8 1336 aaKnown RBP26.47■■□□□ 1.83
RNF4-207ENST00000506706 M0R2C6 588 aa26.47■■□□□ 1.83
RNF4-207ENST00000506706 HSPD1P10809 573 aaKnown RBP26.47■■□□□ 1.83
RNF4-207ENST00000506706 ME3Q16798 604 aa26.47■■□□□ 1.83
RNF4-207ENST00000506706 FOXD4L5Q5VV16 416 aaPredicted RBP26.47■■□□□ 1.83
RNF4-207ENST00000506706 CCDC83Q8IWF9 413 aa26.47■■□□□ 1.83
RNF4-207ENST00000506706 FOXD4L4Q8WXT5 416 aaPredicted RBP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms