RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 USP50Q70EL3 339 aaPredicted RBP11.58□□□□□ -0.56
PDLIM5-209ENST00000506632 ANKRD18AQ8IVF6 992 aa11.58□□□□□ -0.56
PDLIM5-209ENST00000506632 CCDC85AQ96PX6 553 aaPredicted RBP11.58□□□□□ -0.56
PDLIM5-209ENST00000506632 EYA3Q99504 573 aa11.58□□□□□ -0.56
PDLIM5-209ENST00000506632 GREM2Q9H772 168 aa11.58□□□□□ -0.56
PDLIM5-209ENST00000506632 CREBZFQ9NS37 354 aa11.58□□□□□ -0.56
PDLIM5-209ENST00000506632 F6X3S4 739 aa11.57□□□□□ -0.56
PDLIM5-209ENST00000506632 C6orf229H3BNL8 230 aa11.57□□□□□ -0.56
PDLIM5-209ENST00000506632 CSF1RP07333 972 aa11.57□□□□□ -0.56
PDLIM5-209ENST00000506632 GMPSP49915 693 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-209ENST00000506632 TNIP1Q15025 636 aa11.57□□□□□ -0.56
PDLIM5-209ENST00000506632 MAP1SQ66K74 1059 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-209ENST00000506632 CNTROBQ8N137 903 aa11.57□□□□□ -0.56
PDLIM5-209ENST00000506632 GPR101Q96P66 508 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-209ENST00000506632 CDC5LQ99459 802 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-209ENST00000506632 DBNDD1Q9H9R9 158 aa11.57□□□□□ -0.56
PDLIM5-209ENST00000506632 ADARB2Q9NS39 739 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-209ENST00000506632 BSDC1Q9NW68 430 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-209ENST00000506632 CLEC11AQ9Y240 323 aa11.57□□□□□ -0.56
PDLIM5-209ENST00000506632 SCN9AQ15858 1988 aa11.57□□□□□ -0.56
PDLIM5-209ENST00000506632 XDHP47989 1333 aa11.57□□□□□ -0.56
PDLIM5-209ENST00000506632 E9PSI1 815 aa11.56□□□□□ -0.56
PDLIM5-209ENST00000506632 UFL1O94874 794 aa11.56□□□□□ -0.56
PDLIM5-209ENST00000506632 SLFN5Q08AF3 891 aa11.56□□□□□ -0.56
PDLIM5-209ENST00000506632 ANKIB1Q9P2G1 1089 aa11.56□□□□□ -0.56
PDLIM5-209ENST00000506632 GGA1Q9UJY5 639 aa11.56□□□□□ -0.56
PDLIM5-209ENST00000506632 SPEF2Q9C093 1822 aa11.56□□□□□ -0.56
PDLIM5-209ENST00000506632 ZNF609O15014 1411 aa11.55□□□□□ -0.56
PDLIM5-209ENST00000506632 PSMD14O00487 310 aa11.55□□□□□ -0.56
PDLIM5-209ENST00000506632 RIMBP2O15034 1052 aa11.55□□□□□ -0.56
PDLIM5-209ENST00000506632 ECE2O60344 883 aa11.55□□□□□ -0.56
PDLIM5-209ENST00000506632 DPF2Q92785 391 aa11.55□□□□□ -0.56
PDLIM5-209ENST00000506632 ZC3H12CQ9C0D7 883 aaKnown RBP11.55□□□□□ -0.56
PDLIM5-209ENST00000506632 KCNQ5Q9NR82 932 aa11.55□□□□□ -0.56
PDLIM5-209ENST00000506632 PGAP2Q9UHJ9 254 aa11.55□□□□□ -0.56
PDLIM5-209ENST00000506632 MINPP1Q9UNW1 487 aa11.55□□□□□ -0.56
PDLIM5-209ENST00000506632 PSME4Q14997 1843 aa11.55□□□□□ -0.56
PDLIM5-209ENST00000506632 SHTN1A0MZ66 631 aa11.54□□□□□ -0.56
PDLIM5-209ENST00000506632 TMEM88BA6NKF7 163 aa11.54□□□□□ -0.56
PDLIM5-209ENST00000506632 ITGA6P23229 1130 aa11.54□□□□□ -0.56
PDLIM5-209ENST00000506632 ATP2B4P23634 1241 aa11.54□□□□□ -0.56
PDLIM5-209ENST00000506632 HIRAP54198 1017 aaPredicted RBP11.54□□□□□ -0.56
PDLIM5-209ENST00000506632 FOXO4P98177 505 aa11.54□□□□□ -0.56
PDLIM5-209ENST00000506632 PLCB2Q00722 1185 aa11.54□□□□□ -0.56
PDLIM5-209ENST00000506632 DOK7Q18PE1 504 aa11.54□□□□□ -0.56
PDLIM5-209ENST00000506632 FAM161AQ3B820 660 aa11.54□□□□□ -0.56
PDLIM5-209ENST00000506632 TRMT2AQ8IZ69 625 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-209ENST00000506632 MRPL50Q8N5N7 158 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-209ENST00000506632 BCL2L13Q9BXK5 485 aa11.54□□□□□ -0.56
PDLIM5-209ENST00000506632 CNOT7Q9UIV1 285 aaKnown RBP11.54□□□□□ -0.56
PDLIM5-209ENST00000506632 ZBTB12Q9Y330 459 aaPredicted RBP11.54□□□□□ -0.56
PDLIM5-209ENST00000506632 CNTNAP1P78357 1384 aa11.54□□□□□ -0.56
PDLIM5-209ENST00000506632 MED23Q9ULK4 1368 aa11.54□□□□□ -0.56
PDLIM5-209ENST00000506632 WTIPA6NIX2 430 aaPredicted RBP11.53□□□□□ -0.56
PDLIM5-209ENST00000506632 ALDH1L1O75891 902 aa11.53□□□□□ -0.56
PDLIM5-209ENST00000506632 VIL1P09327 827 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-209ENST00000506632 RPS12P25398 132 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-209ENST00000506632 MICALL2Q8IY33 904 aa11.53□□□□□ -0.56
PDLIM5-209ENST00000506632 TRPM4Q8TD43 1214 aa11.53□□□□□ -0.56
PDLIM5-209ENST00000506632 ZC3H15Q8WU90 426 aaKnown RBP11.53□□□□□ -0.56
PDLIM5-209ENST00000506632 ZNF646O15015 1829 aaPredicted RBP11.52□□□□□ -0.57
PDLIM5-209ENST00000506632 GRM8O00222 908 aa11.52□□□□□ -0.57
PDLIM5-209ENST00000506632 IGHMBP2P38935 993 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-209ENST00000506632 CCT4P50991 539 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-209ENST00000506632 FMR1Q06787 632 aaKnown RBP eCLIP11.52□□□□□ -0.57
PDLIM5-209ENST00000506632 EPHA10Q5JZY3 1008 aa11.52□□□□□ -0.57
PDLIM5-209ENST00000506632 SSH1Q8WYL5 1049 aa11.52□□□□□ -0.57
PDLIM5-209ENST00000506632 CDCA7LQ96GN5 454 aa11.52□□□□□ -0.57
PDLIM5-209ENST00000506632 SRCIN1Q9C0H9 1055 aa11.52□□□□□ -0.57
PDLIM5-209ENST00000506632 TRPM7Q96QT4 1865 aa11.52□□□□□ -0.57
PDLIM5-209ENST00000506632 RASSF10A6NK89 507 aa11.51□□□□□ -0.57
PDLIM5-209ENST00000506632 H7C1D1 291 aa11.51□□□□□ -0.57
PDLIM5-209ENST00000506632 PODNQ7Z5L7 613 aa11.51□□□□□ -0.57
PDLIM5-209ENST00000506632 GMLQ99445 158 aa11.51□□□□□ -0.57
PDLIM5-209ENST00000506632 MKRN1Q9UHC7 482 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-209ENST00000506632 LEMD3Q9Y2U8 911 aa11.51□□□□□ -0.57
PDLIM5-209ENST00000506632 UTYO14607 1347 aa11.51□□□□□ -0.57
PDLIM5-209ENST00000506632 A0A1B0GUL6 1792 aa11.51□□□□□ -0.57
PDLIM5-209ENST00000506632 ANKRD18BA2A2Z9 1011 aa11.5□□□□□ -0.57
PDLIM5-209ENST00000506632 TRAF5O00463 557 aa11.5□□□□□ -0.57
PDLIM5-209ENST00000506632 EGFRP00533 1210 aa11.5□□□□□ -0.57
PDLIM5-209ENST00000506632 CST9Q5W186 159 aa11.5□□□□□ -0.57
PDLIM5-209ENST00000506632 SLC4A10Q6U841 1118 aa11.5□□□□□ -0.57
PDLIM5-209ENST00000506632 LMBR1LQ6UX01 489 aa11.5□□□□□ -0.57
PDLIM5-209ENST00000506632 SAMD7Q7Z3H4 446 aa11.5□□□□□ -0.57
PDLIM5-209ENST00000506632 TXNRD3Q86VQ6 643 aa11.5□□□□□ -0.57
PDLIM5-209ENST00000506632 KAZALD1Q96I82 304 aa11.5□□□□□ -0.57
PDLIM5-209ENST00000506632 MPHOSPH8Q99549 860 aa11.5□□□□□ -0.57
PDLIM5-209ENST00000506632 ANKRD2Q9GZV1 360 aa11.5□□□□□ -0.57
PDLIM5-209ENST00000506632 PTPRCP08575 1304 aa11.5□□□□□ -0.57
PDLIM5-209ENST00000506632 IRS2Q9Y4H2 1338 aa11.5□□□□□ -0.57
PDLIM5-209ENST00000506632 G3V3G9 751 aa11.49□□□□□ -0.57
PDLIM5-209ENST00000506632 ZNF280AP59817 542 aaPredicted RBP11.49□□□□□ -0.57
PDLIM5-209ENST00000506632 CHRNDQ07001 517 aa11.49□□□□□ -0.57
PDLIM5-209ENST00000506632 IFIT5Q13325 482 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-209ENST00000506632 ALDH1L2Q3SY69 923 aa11.49□□□□□ -0.57
PDLIM5-209ENST00000506632 DCAF8Q5TAQ9 597 aa11.49□□□□□ -0.57
PDLIM5-209ENST00000506632 RSBN1LQ6PCB5 846 aaPredicted RBP11.49□□□□□ -0.57
PDLIM5-209ENST00000506632 AGBL3Q8NEM8 1001 aa11.49□□□□□ -0.57
PDLIM5-209ENST00000506632 SUCLG2Q96I99 432 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms