RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 HSP90AB4PQ58FF6 505 aa11.55□□□□□ -0.56
TPM3-218ENST00000505010 PLA2G12BQ9BX93 195 aa11.55□□□□□ -0.56
TPM3-218ENST00000505010 LRRCC1Q9C099 1032 aa11.55□□□□□ -0.56
TPM3-218ENST00000505010 PA2G4Q9UQ80 394 aaKnown RBP11.55□□□□□ -0.56
TPM3-218ENST00000505010 IQCA1LA6NCM1 817 aa11.54□□□□□ -0.56
TPM3-218ENST00000505010 RAB11FIP3O75154 756 aa11.54□□□□□ -0.56
TPM3-218ENST00000505010 DDNO94850 711 aaPredicted RBP11.54□□□□□ -0.56
TPM3-218ENST00000505010 CTSWP56202 376 aa11.54□□□□□ -0.56
TPM3-218ENST00000505010 KLHDC4Q8TBB5 520 aa11.54□□□□□ -0.56
TPM3-218ENST00000505010 ZNF622Q969S3 477 aaKnown RBP eCLIP11.54□□□□□ -0.564e-8■■□□□ 11.8
TPM3-218ENST00000505010 CCDC85AQ96PX6 553 aaPredicted RBP11.54□□□□□ -0.56
TPM3-218ENST00000505010 SETDB2Q96T68 719 aa11.54□□□□□ -0.56
TPM3-218ENST00000505010 SIL1Q9H173 461 aa11.54□□□□□ -0.56
TPM3-218ENST00000505010 ZNF219Q9P2Y4 722 aaPredicted RBP11.54□□□□□ -0.56
TPM3-218ENST00000505010 CCDC88AQ3V6T2 1871 aa11.54□□□□□ -0.56
TPM3-218ENST00000505010 AK9Q5TCS8 1911 aa11.54□□□□□ -0.56
TPM3-218ENST00000505010 PASKQ96RG2 1323 aa11.54□□□□□ -0.56
TPM3-218ENST00000505010 CARMIL3Q8ND23 1372 aa11.54□□□□□ -0.56
TPM3-218ENST00000505010 TIAM2Q8IVF5 1701 aa11.53□□□□□ -0.56
TPM3-218ENST00000505010 CCDC85CA6NKD9 419 aa11.53□□□□□ -0.56
TPM3-218ENST00000505010 C21orf2O43822 256 aa11.53□□□□□ -0.56
TPM3-218ENST00000505010 PDE8AO60658 829 aa11.53□□□□□ -0.56
TPM3-218ENST00000505010 RFX5P48382 616 aaPredicted RBP11.53□□□□□ -0.56
TPM3-218ENST00000505010 G3BP1Q13283 466 aaKnown RBP eCLIP11.53□□□□□ -0.56
TPM3-218ENST00000505010 LDHDQ86WU2 507 aa11.53□□□□□ -0.56
TPM3-218ENST00000505010 NBPF5PQ86XG9 351 aaPredicted RBP11.53□□□□□ -0.56
TPM3-218ENST00000505010 NUTM1Q86Y26 1132 aa11.53□□□□□ -0.56
TPM3-218ENST00000505010 ERC1Q8IUD2 1116 aa11.53□□□□□ -0.56
TPM3-218ENST00000505010 KIF1BPQ96EK5 621 aa11.53□□□□□ -0.56
TPM3-218ENST00000505010 NYXQ9GZU5 481 aa11.53□□□□□ -0.56
TPM3-218ENST00000505010 NOP58Q9Y2X3 529 aaKnown RBP11.53□□□□□ -0.56
TPM3-218ENST00000505010 A0A1B0GUL6 1792 aa11.53□□□□□ -0.56
TPM3-218ENST00000505010 ABCC12Q96J65 1359 aa11.53□□□□□ -0.56
TPM3-218ENST00000505010 NPHP1O15259 732 aa11.52□□□□□ -0.57
TPM3-218ENST00000505010 HSPA8P11142 646 aaKnown RBP11.52□□□□□ -0.57
TPM3-218ENST00000505010 HCLS1P14317 486 aaPredicted RBP11.52□□□□□ -0.57
TPM3-218ENST00000505010 HSP90B1P14625 803 aaKnown RBP11.52□□□□□ -0.57
TPM3-218ENST00000505010 GTF2E1P29083 439 aaPredicted RBP11.52□□□□□ -0.57
TPM3-218ENST00000505010 MAP2K1Q02750 393 aaPredicted RBP11.52□□□□□ -0.57
TPM3-218ENST00000505010 CCDC57Q2TAC2 916 aa11.52□□□□□ -0.57
TPM3-218ENST00000505010 DEFB115Q30KQ5 88 aa11.52□□□□□ -0.57
TPM3-218ENST00000505010 TAF7LQ5H9L4 462 aa11.52□□□□□ -0.57
TPM3-218ENST00000505010 RHPN1Q8TCX5 695 aa11.52□□□□□ -0.57
TPM3-218ENST00000505010 TAOK3Q9H2K8 898 aa11.52□□□□□ -0.57
TPM3-218ENST00000505010 IL1RAPL2Q9NP60 686 aa11.52□□□□□ -0.57
TPM3-218ENST00000505010 COPRSQ9NQ92 184 aa11.52□□□□□ -0.57
TPM3-218ENST00000505010 TAF1P21675 1872 aa11.52□□□□□ -0.57
TPM3-218ENST00000505010 ITGBL1O95965 494 aaPredicted RBP11.51□□□□□ -0.57
TPM3-218ENST00000505010 PDE6BP35913 854 aa11.51□□□□□ -0.57
TPM3-218ENST00000505010 RGS19P49795 217 aa11.51□□□□□ -0.57
TPM3-218ENST00000505010 PTPN12Q05209 780 aaKnown RBP11.51□□□□□ -0.57
TPM3-218ENST00000505010 IFIT5Q13325 482 aaKnown RBP11.51□□□□□ -0.57
TPM3-218ENST00000505010 TTLL11Q8NHH1 800 aa11.51□□□□□ -0.57
TPM3-218ENST00000505010 OTUD7AQ8TE49 926 aaPredicted RBP11.51□□□□□ -0.57
TPM3-218ENST00000505010 ZNF594Q96JF6 807 aaPredicted RBP11.51□□□□□ -0.57
TPM3-218ENST00000505010 GREM2Q9H772 168 aa11.51□□□□□ -0.57
TPM3-218ENST00000505010 NRXN2Q9P2S2 1712 aa11.5□□□□□ -0.57
TPM3-218ENST00000505010 ANKRD18BA2A2Z9 1011 aa11.5□□□□□ -0.57
TPM3-218ENST00000505010 CSF1RP07333 972 aa11.5□□□□□ -0.57
TPM3-218ENST00000505010 EAPPQ56P03 285 aaPredicted RBP11.5□□□□□ -0.57
TPM3-218ENST00000505010 BRIP1Q9BX63 1249 aa11.5□□□□□ -0.57
TPM3-218ENST00000505010 TAF1DQ9H5J8 278 aaPredicted RBP11.5□□□□□ -0.57
TPM3-218ENST00000505010 CLEC11AQ9Y240 323 aa11.5□□□□□ -0.57
TPM3-218ENST00000505010 LTBP3Q9NS15 1303 aa11.5□□□□□ -0.57
TPM3-218ENST00000505010 ANKRD31Q8N7Z5 1873 aa11.5□□□□□ -0.57
TPM3-218ENST00000505010 ARAP2Q8WZ64 1704 aa11.49□□□□□ -0.57
TPM3-218ENST00000505010 RASSF10A6NK89 507 aa11.49□□□□□ -0.57
TPM3-218ENST00000505010 SASH1O94885 1247 aa11.49□□□□□ -0.57
TPM3-218ENST00000505010 ITGA6P23229 1130 aa11.49□□□□□ -0.57
TPM3-218ENST00000505010 CCDC152Q4G0S7 254 aa11.49□□□□□ -0.57
TPM3-218ENST00000505010 TPTE2Q6XPS3 522 aa11.49□□□□□ -0.57
TPM3-218ENST00000505010 PLEKHM2Q8IWE5 1019 aa11.49□□□□□ -0.57
TPM3-218ENST00000505010 CNBD1Q8NA66 436 aa11.49□□□□□ -0.57
TPM3-218ENST00000505010 L3MBTL3Q96JM7 780 aaPredicted RBP11.49□□□□□ -0.57
TPM3-218ENST00000505010 WDR33Q9C0J8 1336 aaKnown RBP11.49□□□□□ -0.57
TPM3-218ENST00000505010 RTL9Q8NET4 1388 aa11.49□□□□□ -0.57
TPM3-218ENST00000505010 RIC1Q4ADV7 1423 aa11.49□□□□□ -0.57
TPM3-218ENST00000505010 COL4A1P02462 1669 aa11.49□□□□□ -0.57
TPM3-218ENST00000505010 DLEC1Q9Y238 1755 aa11.49□□□□□ -0.57
TPM3-218ENST00000505010 EYA2O00167 538 aa11.48□□□□□ -0.57
TPM3-218ENST00000505010 MX1P20591 662 aa11.48□□□□□ -0.57
TPM3-218ENST00000505010 SOGA3Q5TF21 947 aa11.48□□□□□ -0.57
TPM3-218ENST00000505010 AACSQ86V21 672 aa11.48□□□□□ -0.57
TPM3-218ENST00000505010 CLASRPQ8N2M8 674 aaKnown RBP11.48□□□□□ -0.57
TPM3-218ENST00000505010 CCDC24Q8N4L8 307 aa11.48□□□□□ -0.57
TPM3-218ENST00000505010 BEGAINQ9BUH8 593 aa11.48□□□□□ -0.57
TPM3-218ENST00000505010 DICER1Q9UPY3 1922 aaKnown RBP11.47□□□□□ -0.57
TPM3-218ENST00000505010 COL11A2P13942 1736 aaPredicted RBP11.47□□□□□ -0.57
TPM3-218ENST00000505010 ZNF609O15014 1411 aa11.47□□□□□ -0.57
TPM3-218ENST00000505010 SALL3Q9BXA9 1300 aa11.47□□□□□ -0.57
TPM3-218ENST00000505010 CIAO1O76071 339 aa11.47□□□□□ -0.57
TPM3-218ENST00000505010 IFIT2P09913 472 aaKnown RBP11.47□□□□□ -0.57
TPM3-218ENST00000505010 IL15P40933 162 aaPredicted RBP11.47□□□□□ -0.57
TPM3-218ENST00000505010 ST5P78524 1137 aa11.47□□□□□ -0.57
TPM3-218ENST00000505010 TFCP2Q12800 502 aa11.47□□□□□ -0.57
TPM3-218ENST00000505010 LRRC24Q50LG9 513 aa11.47□□□□□ -0.57
TPM3-218ENST00000505010 SLC10A5Q5PT55 438 aa11.47□□□□□ -0.57
TPM3-218ENST00000505010 TTC22Q5TAA0 569 aa11.47□□□□□ -0.57
TPM3-218ENST00000505010 C3orf67Q6ZVT6 689 aa11.47□□□□□ -0.57
TPM3-218ENST00000505010 ATG9AQ7Z3C6 839 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms