RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 KIF23Q02241 960 aaPredicted RBP8.08□□□□□ -1.12
GYPB-204ENST00000504951 KIAA2012Q0VF49 1180 aa8.08□□□□□ -1.12
GYPB-204ENST00000504951 HLFQ16534 295 aa8.08□□□□□ -1.12
GYPB-204ENST00000504951 HABP4Q5JVS0 413 aaKnown RBP8.08□□□□□ -1.12
GYPB-204ENST00000504951 VARS2Q5ST30 1063 aaKnown RBP8.08□□□□□ -1.12
GYPB-204ENST00000504951 SP8Q8IXZ3 490 aa8.08□□□□□ -1.12
GYPB-204ENST00000504951 C2orf69Q8N8R5 385 aa8.08□□□□□ -1.12
GYPB-204ENST00000504951 RPGRQ92834 1020 aaKnown RBP8.08□□□□□ -1.12
GYPB-204ENST00000504951 CFHR5Q9BXR6 569 aa8.08□□□□□ -1.12
GYPB-204ENST00000504951 TMX4Q9H1E5 349 aaPredicted RBP8.08□□□□□ -1.12
GYPB-204ENST00000504951 GBA2Q9HCG7 927 aaPredicted RBP8.08□□□□□ -1.12
GYPB-204ENST00000504951 CNOT7Q9UIV1 285 aaKnown RBP8.08□□□□□ -1.12
GYPB-204ENST00000504951 HPS5Q9UPZ3 1129 aa8.08□□□□□ -1.12
GYPB-204ENST00000504951 PER1O15534 1290 aaPredicted RBP8.07□□□□□ -1.12
GYPB-204ENST00000504951 KCNQ3O43525 872 aa8.07□□□□□ -1.12
GYPB-204ENST00000504951 TRPA1O75762 1119 aa8.07□□□□□ -1.12
GYPB-204ENST00000504951 SLC10A3P09131 477 aa8.07□□□□□ -1.12
GYPB-204ENST00000504951 HSPA5P11021 654 aaKnown RBP8.07□□□□□ -1.12
GYPB-204ENST00000504951 RPS12P25398 132 aaKnown RBP8.07□□□□□ -1.12
GYPB-204ENST00000504951 TMC4Q7Z404 712 aa8.07□□□□□ -1.12
GYPB-204ENST00000504951 ZNF34Q8IZ26 560 aa8.07□□□□□ -1.12
GYPB-204ENST00000504951 MAP3K15Q6ZN16 1313 aa8.06□□□□□ -1.12
GYPB-204ENST00000504951 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.06□□□□□ -1.12
GYPB-204ENST00000504951 PPEF1O14829 653 aaPredicted RBP8.06□□□□□ -1.12
GYPB-204ENST00000504951 EIF4G2P78344 907 aaKnown RBP eCLIP8.06□□□□□ -1.12
GYPB-204ENST00000504951 AOC3Q16853 763 aa8.06□□□□□ -1.12
GYPB-204ENST00000504951 USP48Q86UV5 1035 aa8.06□□□□□ -1.12
GYPB-204ENST00000504951 RNF166Q96A37 237 aaPredicted RBP8.06□□□□□ -1.12
GYPB-204ENST00000504951 ZFP91Q96JP5 570 aaPredicted RBP8.06□□□□□ -1.12
GYPB-204ENST00000504951 NLRP3Q96P20 1036 aa8.06□□□□□ -1.12
GYPB-204ENST00000504951 ABCC12Q96J65 1359 aa8.06□□□□□ -1.12
GYPB-204ENST00000504951 AKAP11Q9UKA4 1901 aa8.05□□□□□ -1.12
GYPB-204ENST00000504951 TM4SF4P48230 202 aa8.05□□□□□ -1.12
GYPB-204ENST00000504951 ZNF157P51786 506 aaPredicted RBP8.05□□□□□ -1.12
GYPB-204ENST00000504951 PARP10Q53GL7 1025 aa8.05□□□□□ -1.12
GYPB-204ENST00000504951 INTS3Q68E01 1043 aaKnown RBP8.05□□□□□ -1.12
GYPB-204ENST00000504951 FBXO46Q6PJ61 603 aaPredicted RBP8.05□□□□□ -1.12
GYPB-204ENST00000504951 PPP1R42Q7Z4L9 355 aa8.05□□□□□ -1.12
GYPB-204ENST00000504951 ZNF687Q8N1G0 1237 aa8.05□□□□□ -1.12
GYPB-204ENST00000504951 TRPM4Q8TD43 1214 aa8.05□□□□□ -1.12
GYPB-204ENST00000504951 BCL2L13Q9BXK5 485 aa8.05□□□□□ -1.12
GYPB-204ENST00000504951 ERBB4Q15303 1308 aa8.04□□□□□ -1.12
GYPB-204ENST00000504951 CLSPNQ9HAW4 1339 aa8.04□□□□□ -1.12
GYPB-204ENST00000504951 PRAMEF22A3QJZ6 481 aa8.04□□□□□ -1.12
GYPB-204ENST00000504951 NTSR2O95665 410 aa8.04□□□□□ -1.12
GYPB-204ENST00000504951 TAF7Q15545 349 aaPredicted RBP8.04□□□□□ -1.12
GYPB-204ENST00000504951 SUSD4Q5VX71 490 aa8.04□□□□□ -1.12
GYPB-204ENST00000504951 TMEM92Q6UXU6 159 aa8.04□□□□□ -1.12
GYPB-204ENST00000504951 GIGYF2Q6Y7W6 1299 aaKnown RBP8.04□□□□□ -1.12
GYPB-204ENST00000504951 KRT26Q7Z3Y9 468 aa8.04□□□□□ -1.12
GYPB-204ENST00000504951 NUTM1Q86Y26 1132 aa8.04□□□□□ -1.12
GYPB-204ENST00000504951 MPNDQ8N594 471 aa8.04□□□□□ -1.12
GYPB-204ENST00000504951 ZNF609O15014 1411 aa8.03□□□□□ -1.12
GYPB-204ENST00000504951 COL3A1P02461 1466 aaPredicted RBP8.03□□□□□ -1.12
GYPB-204ENST00000504951 YDJCA8MPS7 323 aa8.03□□□□□ -1.12
GYPB-204ENST00000504951 GPR153Q6NV75 609 aa8.03□□□□□ -1.12
GYPB-204ENST00000504951 DPP8Q6V1X1 898 aaPredicted RBP8.03□□□□□ -1.12
GYPB-204ENST00000504951 DCPSQ96C86 337 aaKnown RBP8.03□□□□□ -1.12
GYPB-204ENST00000504951 MS4A4AQ96JQ5 239 aa8.03□□□□□ -1.12
GYPB-204ENST00000504951 PHACTR3Q96KR7 559 aa8.03□□□□□ -1.12
GYPB-204ENST00000504951 ZNF408Q9H9D4 720 aa8.03□□□□□ -1.12
GYPB-204ENST00000504951 UBN2Q6ZU65 1347 aa8.03□□□□□ -1.12
GYPB-204ENST00000504951 NUP98P52948 1817 aa8.02□□□□□ -1.13
GYPB-204ENST00000504951 RAD17O75943 681 aa8.02□□□□□ -1.13
GYPB-204ENST00000504951 PIP4K2AP48426 406 aaPredicted RBP8.02□□□□□ -1.13
GYPB-204ENST00000504951 FXR1P51114 621 aaKnown RBP eCLIP8.02□□□□□ -1.13
GYPB-204ENST00000504951 RASAL3Q86YV0 1011 aa8.02□□□□□ -1.13
GYPB-204ENST00000504951 PNISRQ8TF01 805 aaKnown RBP8.02□□□□□ -1.13
GYPB-204ENST00000504951 ZNF296Q8WUU4 475 aaPredicted RBP8.02□□□□□ -1.13
GYPB-204ENST00000504951 RNF25Q96BH1 459 aaPredicted RBP8.02□□□□□ -1.13
GYPB-204ENST00000504951 RSPH6AQ9H0K4 717 aa8.02□□□□□ -1.13
GYPB-204ENST00000504951 ABCC4O15439 1325 aa8.02□□□□□ -1.13
GYPB-204ENST00000504951 PITPNM2Q9BZ72 1349 aa8.02□□□□□ -1.13
GYPB-204ENST00000504951 FAM177BA6PVY3 158 aa8.01□□□□□ -1.13
GYPB-204ENST00000504951 GPR25O00155 361 aa8.01□□□□□ -1.13
GYPB-204ENST00000504951 VIL1P09327 827 aaKnown RBP8.01□□□□□ -1.13
GYPB-204ENST00000504951 MMP14P50281 582 aa8.01□□□□□ -1.13
GYPB-204ENST00000504951 KIF6Q6ZMV9 814 aa8.01□□□□□ -1.13
GYPB-204ENST00000504951 RTF1Q92541 710 aaKnown RBP8.01□□□□□ -1.13
GYPB-204ENST00000504951 HDAC9Q9UKV0 1011 aa8.01□□□□□ -1.13
GYPB-204ENST00000504951 POLR2AP24928 1970 aaKnown RBP8.01□□□□□ -1.13
GYPB-204ENST00000504951 PSMD14O00487 310 aa8□□□□□ -1.13
GYPB-204ENST00000504951 INHBEP58166 350 aa8□□□□□ -1.13
GYPB-204ENST00000504951 ZNF280AP59817 542 aaPredicted RBP8□□□□□ -1.13
GYPB-204ENST00000504951 GRAPQ13588 217 aa8□□□□□ -1.13
GYPB-204ENST00000504951 TTLL7Q6ZT98 887 aa8□□□□□ -1.13
GYPB-204ENST00000504951 SAMD7Q7Z3H4 446 aa8□□□□□ -1.13
GYPB-204ENST00000504951 LRP10Q7Z4F1 713 aa8□□□□□ -1.13
GYPB-204ENST00000504951 SULF1Q8IWU6 871 aa8□□□□□ -1.13
GYPB-204ENST00000504951 GRAPLQ8TC17 118 aaPredicted RBP8□□□□□ -1.13
GYPB-204ENST00000504951 UTP14AQ9BVJ6 771 aaKnown RBP8□□□□□ -1.13
GYPB-204ENST00000504951 SHTN1A0MZ66 631 aa7.99□□□□□ -1.13
GYPB-204ENST00000504951 UNCXA6NJT0 531 aa7.99□□□□□ -1.13
GYPB-204ENST00000504951 FKTNO75072 461 aa7.99□□□□□ -1.13
GYPB-204ENST00000504951 ALDH1A1P00352 501 aa7.99□□□□□ -1.13
GYPB-204ENST00000504951 PRKAR2BP31323 418 aa7.99□□□□□ -1.13
GYPB-204ENST00000504951 EIF4A1P60842 406 aaKnown RBP7.99□□□□□ -1.13
GYPB-204ENST00000504951 WASHC4Q2M389 1173 aa7.99□□□□□ -1.13
GYPB-204ENST00000504951 HSP90AB3PQ58FF7 597 aa7.99□□□□□ -1.13
GYPB-204ENST00000504951 DDX46Q7L014 1031 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms