RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 TSKSQ9UJT2 592 aa7.12□□□□□ -1.27
CLCN3-204ENST00000504131 NOP2P46087 812 aaKnown RBP7.12□□□□□ -1.27
CLCN3-204ENST00000504131 CDC37Q16543 378 aaPredicted RBP7.12□□□□□ -1.27
CLCN3-204ENST00000504131 CCDC38Q502W7 563 aa7.12□□□□□ -1.27
CLCN3-204ENST00000504131 ZSWIM4Q9H7M6 989 aa7.12□□□□□ -1.27
CLCN3-204ENST00000504131 THRAP3Q9Y2W1 955 aaKnown RBP7.12□□□□□ -1.27
CLCN3-204ENST00000504131 TNIKQ9UKE5 1360 aa7.12□□□□□ -1.27
CLCN3-204ENST00000504131 CCDC85CA6NKD9 419 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 TACC1O75410 805 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 GYS2P54840 703 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 ARPC4P59998 168 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 CCDC15Q0P6D6 951 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 FLIIQ13045 1269 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 PKD2Q13563 968 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 CCSAPQ6IQ19 270 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-204ENST00000504131 HOMER1Q86YM7 354 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 CCDC102AQ96A19 550 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 MAGEA9P43362 315 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 PTPN14Q15678 1187 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 ZBTB10Q96DT7 871 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 AASDHPPTQ9NRN7 309 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 GOLGA3Q08378 1498 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 SPECC1L-ADORA2AF8WAN1 911 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 VDRP11473 427 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 MYCLP1P12525 358 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-204ENST00000504131 PPP2R5CQ13362 524 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 CCDC50Q8IVM0 306 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 CAGE1Q8TC20 777 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 CLMNQ96JQ2 1002 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 BAG1Q99933 345 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-204ENST00000504131 POLR3CQ9BUI4 534 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-204ENST00000504131 NDC80O14777 642 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 TSPAN9O75954 239 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 GCFC2P16383 781 aaKnown RBP7.11□□□□□ -1.27
CLCN3-204ENST00000504131 RIPK4P57078 832 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 WASHC5Q12768 1159 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 SPATA24Q86W54 205 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 EMC3Q9P0I2 261 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 PHF8Q9UPP1 1060 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 TUBA1BP68363 451 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 EFCAB2Q5VUJ9 269 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 ANO1Q5XXA6 986 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 CPLX2Q6PUV4 134 aaKnown RBP7.11□□□□□ -1.27
CLCN3-204ENST00000504131 DSTYKQ6XUX3 929 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 TUBA1AQ71U36 451 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 HELQQ8TDG4 1101 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 TSC22D3Q99576 134 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 SIL1Q9H173 461 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 FAM114A2Q9NRY5 505 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.11□□□□□ -1.27
CLCN3-204ENST00000504131 TSC22D4Q9Y3Q8 395 aa7.11□□□□□ -1.27
CLCN3-204ENST00000504131 COQ9O75208 318 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 CAPN15O75808 1086 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 ZFYP08048 801 aaPredicted RBP7.1□□□□□ -1.27
CLCN3-204ENST00000504131 GFAPP14136 432 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 Q4G0T1 1027 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 TBC1D10BQ4KMP7 808 aaPredicted RBP7.1□□□□□ -1.27
CLCN3-204ENST00000504131 SAMD3Q8N6K7 520 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 CCDC150Q8NCX0 1101 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 B4GALNT2Q8NHY0 566 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 GABPB2Q8TAK5 448 aaPredicted RBP7.1□□□□□ -1.27
CLCN3-204ENST00000504131 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.1□□□□□ -1.27
CLCN3-204ENST00000504131 AS3MTQ9HBK9 375 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 ZNF652Q9Y2D9 606 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 IL16Q14005 1332 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 GMNNO75496 209 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 KRT7P08729 469 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 MAGEA8P43361 318 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 MXRA7P84157 204 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 HLTFQ14527 1009 aaKnown RBP eCLIP7.1□□□□□ -1.27
CLCN3-204ENST00000504131 GRAMD4Q6IC98 578 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 NOP9Q86U38 636 aaKnown RBP7.1□□□□□ -1.27
CLCN3-204ENST00000504131 NEK11Q8NG66 645 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 KIAA1524Q8TCG1 905 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 PALMDQ9NP74 551 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 TUBA8Q9NY65 449 aaPredicted RBP7.1□□□□□ -1.27
CLCN3-204ENST00000504131 PRR12Q9ULL5 1215 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 ZNF232Q9UNY5 417 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 BIN1O00499 593 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 DIAPH1O60610 1272 aaKnown RBP7.1□□□□□ -1.27
CLCN3-204ENST00000504131 DNAJC8O75937 253 aaPredicted RBP7.1□□□□□ -1.27
CLCN3-204ENST00000504131 HPDP32754 393 aaPredicted RBP7.1□□□□□ -1.27
CLCN3-204ENST00000504131 GIMAP6Q6P9H5 292 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 SRLQ86TD4 932 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 CEP112Q8N8E3 955 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 PIBF1Q8WXW3 757 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 OSBPL10Q9BXB5 764 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 THOC2Q8NI27 1593 aaKnown RBP7.1□□□□□ -1.27
CLCN3-204ENST00000504131 CSPG5O95196 566 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 FAM200BP0CF97 657 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 DYNC1I2Q13409 638 aaKnown RBP7.1□□□□□ -1.27
CLCN3-204ENST00000504131 GNPTABQ3T906 1256 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 OTUD6AQ7L8S5 288 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 DZIP1LQ8IYY4 767 aaKnown RBP7.1□□□□□ -1.27
CLCN3-204ENST00000504131 PPP1R9BQ96SB3 815 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 SYNCQ9H7C4 482 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 CNGB3Q9NQW8 809 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 CFDP1Q9UEE9 299 aaPredicted RBP7.1□□□□□ -1.27
CLCN3-204ENST00000504131 CTNNA3Q9UI47 895 aa7.1□□□□□ -1.27
CLCN3-204ENST00000504131 ELF1P32519 619 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms