RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 RIPOR2Q9Y4F9 1068 aa8.49□□□□□ -1.05
TOPBP1-203ENST00000503464 FPGT-TNNI3KV9GXZ4 949 aa8.49□□□□□ -1.05
TOPBP1-203ENST00000503464 MYO5AQ9Y4I1 1855 aaKnown RBP8.49□□□□□ -1.05
TOPBP1-203ENST00000503464 LRRC37AA6NMS7 1700 aa8.49□□□□□ -1.05
TOPBP1-203ENST00000503464 LTBP1Q14766 1721 aa8.49□□□□□ -1.05
TOPBP1-203ENST00000503464 ANKRD18BA2A2Z9 1011 aa8.48□□□□□ -1.05
TOPBP1-203ENST00000503464 POLRMTO00411 1230 aaKnown RBP8.48□□□□□ -1.05
TOPBP1-203ENST00000503464 SF3B3Q15393 1217 aaKnown RBP8.48□□□□□ -1.05
TOPBP1-203ENST00000503464 PRR5LQ6MZQ0 368 aa8.48□□□□□ -1.05
TOPBP1-203ENST00000503464 TBC1D9Q6ZT07 1266 aa8.48□□□□□ -1.05
TOPBP1-203ENST00000503464 SLC51AQ86UW1 340 aa8.48□□□□□ -1.05
TOPBP1-203ENST00000503464 NBPF5PQ86XG9 351 aaPredicted RBP8.48□□□□□ -1.05
TOPBP1-203ENST00000503464 DBNDD2Q9BQY9 259 aa8.48□□□□□ -1.05
TOPBP1-203ENST00000503464 TFCP2L1Q9NZI6 479 aa8.48□□□□□ -1.05
TOPBP1-203ENST00000503464 FBXO3Q9UK99 471 aa8.48□□□□□ -1.05
TOPBP1-203ENST00000503464 TTC41PQ6P2S7 1318 aa8.48□□□□□ -1.05
TOPBP1-203ENST00000503464 CACNA1SQ13698 1873 aa8.47□□□□□ -1.05
TOPBP1-203ENST00000503464 MYH7P12883 1935 aa8.47□□□□□ -1.05
TOPBP1-203ENST00000503464 IFIT2P09913 472 aaKnown RBP8.47□□□□□ -1.05
TOPBP1-203ENST00000503464 ADORA1P30542 326 aa8.47□□□□□ -1.05
TOPBP1-203ENST00000503464 CCDC152Q4G0S7 254 aa8.47□□□□□ -1.05
TOPBP1-203ENST00000503464 NYXQ9GZU5 481 aa8.47□□□□□ -1.05
TOPBP1-203ENST00000503464 GPR108Q9NPR9 543 aa8.47□□□□□ -1.05
TOPBP1-203ENST00000503464 ECHDC1Q9NTX5 307 aa8.47□□□□□ -1.05
TOPBP1-203ENST00000503464 DOCK2Q92608 1830 aa8.46□□□□□ -1.06
TOPBP1-203ENST00000503464 CDC45O75419 566 aa8.46□□□□□ -1.06
TOPBP1-203ENST00000503464 MAP4K4O95819 1239 aaPredicted RBP8.46□□□□□ -1.06
TOPBP1-203ENST00000503464 SERPINB2P05120 415 aa8.46□□□□□ -1.06
TOPBP1-203ENST00000503464 TIMM10P62072 90 aa8.46□□□□□ -1.06
TOPBP1-203ENST00000503464 SLC15A2Q16348 729 aa8.46□□□□□ -1.06
TOPBP1-203ENST00000503464 TPTE2Q6XPS3 522 aa8.46□□□□□ -1.06
TOPBP1-203ENST00000503464 LDHAL6AQ6ZMR3 332 aa8.46□□□□□ -1.06
TOPBP1-203ENST00000503464 CNBD1Q8NA66 436 aa8.46□□□□□ -1.06
TOPBP1-203ENST00000503464 CELF1Q92879 486 aaKnown RBP8.46□□□□□ -1.06
TOPBP1-203ENST00000503464 PDGFDQ9GZP0 370 aaPredicted RBP8.46□□□□□ -1.06
TOPBP1-203ENST00000503464 IL25Q9H293 177 aa8.46□□□□□ -1.06
TOPBP1-203ENST00000503464 FOXD4L1Q9NU39 408 aa8.46□□□□□ -1.06
TOPBP1-203ENST00000503464 DLEC1Q9Y238 1755 aa8.45□□□□□ -1.06
TOPBP1-203ENST00000503464 MYH13Q9UKX3 1938 aa8.45□□□□□ -1.06
TOPBP1-203ENST00000503464 A0A1B0GUL7 405 aa8.45□□□□□ -1.06
TOPBP1-203ENST00000503464 SNAP23O00161 211 aa8.45□□□□□ -1.06
TOPBP1-203ENST00000503464 GLRX3O76003 335 aaKnown RBP8.45□□□□□ -1.06
TOPBP1-203ENST00000503464 PRKAR2AP13861 404 aaKnown RBP8.45□□□□□ -1.06
TOPBP1-203ENST00000503464 FGFR2P21802 821 aa8.45□□□□□ -1.06
TOPBP1-203ENST00000503464 CRY2Q49AN0 593 aa8.45□□□□□ -1.06
TOPBP1-203ENST00000503464 TAF7LQ5H9L4 462 aa8.45□□□□□ -1.06
TOPBP1-203ENST00000503464 CEP126Q9P2H0 1117 aa8.45□□□□□ -1.06
TOPBP1-203ENST00000503464 NDUFB9Q9Y6M9 179 aa8.45□□□□□ -1.06
TOPBP1-203ENST00000503464 KIAA1551Q9HCM1 1747 aa8.45□□□□□ -1.06
TOPBP1-203ENST00000503464 KIF13BQ9NQT8 1826 aa8.45□□□□□ -1.06
TOPBP1-203ENST00000503464 KLRG2A4D1S0 409 aaPredicted RBP8.44□□□□□ -1.06
TOPBP1-203ENST00000503464 WTIPA6NIX2 430 aaPredicted RBP8.44□□□□□ -1.06
TOPBP1-203ENST00000503464 PDE8BO95263 885 aa8.44□□□□□ -1.06
TOPBP1-203ENST00000503464 HSP90B1P14625 803 aaKnown RBP8.44□□□□□ -1.06
TOPBP1-203ENST00000503464 ATP5JP18859 108 aa8.44□□□□□ -1.06
TOPBP1-203ENST00000503464 CHMLP26374 656 aa8.44□□□□□ -1.06
TOPBP1-203ENST00000503464 HMGB2P26583 209 aaKnown RBP8.44□□□□□ -1.06
TOPBP1-203ENST00000503464 GTF2E1P29083 439 aaPredicted RBP8.44□□□□□ -1.06
TOPBP1-203ENST00000503464 BAG6P46379 1132 aa8.44□□□□□ -1.06
TOPBP1-203ENST00000503464 ATP2B3Q16720 1220 aa8.44□□□□□ -1.06
TOPBP1-203ENST00000503464 METTL24Q5JXM2 366 aa8.44□□□□□ -1.06
TOPBP1-203ENST00000503464 MSL1Q68DK7 614 aa8.44□□□□□ -1.06
TOPBP1-203ENST00000503464 FLAD1Q8NFF5 587 aa8.44□□□□□ -1.06
TOPBP1-203ENST00000503464 HELBQ8NG08 1087 aaPredicted RBP8.44□□□□□ -1.06
TOPBP1-203ENST00000503464 EDC3Q96F86 508 aaKnown RBP8.44□□□□□ -1.06
TOPBP1-203ENST00000503464 CNNM1Q9NRU3 951 aa8.44□□□□□ -1.06
TOPBP1-203ENST00000503464 TAF5LO75529 589 aa8.43□□□□□ -1.06
TOPBP1-203ENST00000503464 MMP10P09238 476 aa8.43□□□□□ -1.06
TOPBP1-203ENST00000503464 MFAP1P55081 439 aaKnown RBP8.43□□□□□ -1.06
TOPBP1-203ENST00000503464 CHRNDQ07001 517 aa8.43□□□□□ -1.06
TOPBP1-203ENST00000503464 SCARF1Q14162 830 aa8.43□□□□□ -1.06
TOPBP1-203ENST00000503464 NLGN1Q8N2Q7 840 aa8.43□□□□□ -1.06
TOPBP1-203ENST00000503464 RILPL2Q969X0 211 aa8.43□□□□□ -1.06
TOPBP1-203ENST00000503464 XAGE2Q96GT9 111 aa8.43□□□□□ -1.06
TOPBP1-203ENST00000503464 TBC1D32Q96NH3 1257 aa8.43□□□□□ -1.06
TOPBP1-203ENST00000503464 NEUROD6Q96NK8 337 aa8.43□□□□□ -1.06
TOPBP1-203ENST00000503464 NLRP3Q96P20 1036 aa8.43□□□□□ -1.06
TOPBP1-203ENST00000503464 HAUS7Q99871 368 aa8.43□□□□□ -1.06
TOPBP1-203ENST00000503464 BOLA2Q9H3K6 86 aa8.43□□□□□ -1.06
TOPBP1-203ENST00000503464 STK32BQ9NY57 414 aa8.43□□□□□ -1.06
TOPBP1-203ENST00000503464 MROH5Q6ZUA9 1318 aa8.43□□□□□ -1.06
TOPBP1-203ENST00000503464 COL1A1P02452 1464 aaPredicted RBP8.43□□□□□ -1.06
TOPBP1-203ENST00000503464 DUOX1Q9NRD9 1551 aa8.43□□□□□ -1.06
TOPBP1-203ENST00000503464 TRIM6-TRIM34B2RNG4 842 aa8.42□□□□□ -1.06
TOPBP1-203ENST00000503464 ERC2O15083 957 aa8.42□□□□□ -1.06
TOPBP1-203ENST00000503464 CHGBP05060 677 aa8.42□□□□□ -1.06
TOPBP1-203ENST00000503464 IGHMBP2P38935 993 aaKnown RBP8.42□□□□□ -1.06
TOPBP1-203ENST00000503464 PUM3Q15397 648 aaKnown RBP8.42□□□□□ -1.06
TOPBP1-203ENST00000503464 ANKRD18AQ8IVF6 992 aa8.42□□□□□ -1.06
TOPBP1-203ENST00000503464 GPATCH3Q96I76 525 aa8.42□□□□□ -1.06
TOPBP1-203ENST00000503464 CDC5LQ99459 802 aaKnown RBP8.42□□□□□ -1.06
TOPBP1-203ENST00000503464 MPHOSPH8Q99549 860 aa8.42□□□□□ -1.06
TOPBP1-203ENST00000503464 BSDC1Q9NW68 430 aaPredicted RBP8.42□□□□□ -1.06
TOPBP1-203ENST00000503464 MINPP1Q9UNW1 487 aa8.42□□□□□ -1.06
TOPBP1-203ENST00000503464 AKAP2Q9Y2D5 859 aa8.42□□□□□ -1.06
TOPBP1-203ENST00000503464 IRS2Q9Y4H2 1338 aa8.42□□□□□ -1.06
TOPBP1-203ENST00000503464 SLX4Q8IY92 1834 aa8.42□□□□□ -1.06
TOPBP1-203ENST00000503464 KLRK1P26718 216 aa8.41□□□□□ -1.06
TOPBP1-203ENST00000503464 HOXA10P31260 410 aaPredicted RBP8.41□□□□□ -1.06
TOPBP1-203ENST00000503464 RPS8P62241 208 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms