RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 LRP5O75197 1615 aa9.9□□□□□ -0.82
TOPBP1-202ENST00000503338 A0A1B0GUL7 405 aa9.9□□□□□ -0.82
TOPBP1-202ENST00000503338 POLRMTO00411 1230 aaKnown RBP9.9□□□□□ -0.82
TOPBP1-202ENST00000503338 PDE8BO95263 885 aa9.9□□□□□ -0.82
TOPBP1-202ENST00000503338 PUM3Q15397 648 aaKnown RBP9.9□□□□□ -0.82
TOPBP1-202ENST00000503338 ATP2B3Q16720 1220 aa9.9□□□□□ -0.82
TOPBP1-202ENST00000503338 LRRFIP1Q32MZ4 808 aaKnown RBP9.9□□□□□ -0.82
TOPBP1-202ENST00000503338 PRR5LQ6MZQ0 368 aa9.9□□□□□ -0.82
TOPBP1-202ENST00000503338 TBC1D9Q6ZT07 1266 aa9.9□□□□□ -0.82
TOPBP1-202ENST00000503338 LPIN2Q92539 896 aa9.9□□□□□ -0.82
TOPBP1-202ENST00000503338 RILPL2Q969X0 211 aa9.9□□□□□ -0.82
TOPBP1-202ENST00000503338 NEUROD6Q96NK8 337 aa9.9□□□□□ -0.82
TOPBP1-202ENST00000503338 PUS3Q9BZE2 481 aaKnown RBP9.9□□□□□ -0.82
TOPBP1-202ENST00000503338 DBNLQ9UJU6 430 aaKnown RBP9.9□□□□□ -0.82
TOPBP1-202ENST00000503338 PARP3Q9Y6F1 533 aa9.9□□□□□ -0.82
TOPBP1-202ENST00000503338 DDX60Q8IY21 1712 aaKnown RBP9.9□□□□□ -0.83
TOPBP1-202ENST00000503338 EPB41L2O43491 1005 aaKnown RBP9.89□□□□□ -0.83
TOPBP1-202ENST00000503338 REC8O95072 547 aa9.89□□□□□ -0.83
TOPBP1-202ENST00000503338 IFIT1P09914 478 aaKnown RBP9.89□□□□□ -0.83
TOPBP1-202ENST00000503338 SLC5A1P13866 664 aa9.89□□□□□ -0.83
TOPBP1-202ENST00000503338 ANP32AP39687 249 aaKnown RBP9.89□□□□□ -0.83
TOPBP1-202ENST00000503338 RPS8P62241 208 aaKnown RBP9.89□□□□□ -0.83
TOPBP1-202ENST00000503338 CRY2Q49AN0 593 aa9.89□□□□□ -0.83
TOPBP1-202ENST00000503338 GORABQ5T7V8 394 aa9.89□□□□□ -0.83
TOPBP1-202ENST00000503338 TMC4Q7Z404 712 aa9.89□□□□□ -0.83
TOPBP1-202ENST00000503338 VGLL2Q8N8G2 317 aa9.89□□□□□ -0.83
TOPBP1-202ENST00000503338 SLC16A10Q8TF71 515 aa9.89□□□□□ -0.83
TOPBP1-202ENST00000503338 RUFY2Q8WXA3 655 aa9.89□□□□□ -0.83
TOPBP1-202ENST00000503338 RBM17Q96I25 401 aaKnown RBP9.89□□□□□ -0.83
TOPBP1-202ENST00000503338 ZNF512BQ96KM6 892 aaPredicted RBP9.89□□□□□ -0.83
TOPBP1-202ENST00000503338 ANKRD2Q9GZV1 360 aa9.89□□□□□ -0.83
TOPBP1-202ENST00000503338 SEC31BQ9NQW1 1179 aa9.89□□□□□ -0.83
TOPBP1-202ENST00000503338 RFX7Q2KHR2 1363 aa9.88□□□□□ -0.83
TOPBP1-202ENST00000503338 QSER1Q2KHR3 1735 aa9.88□□□□□ -0.83
TOPBP1-202ENST00000503338 KLRG2A4D1S0 409 aaPredicted RBP9.88□□□□□ -0.83
TOPBP1-202ENST00000503338 UQCRFS1P1P0C7P4 283 aa9.88□□□□□ -0.83
TOPBP1-202ENST00000503338 PDE6BP35913 854 aa9.88□□□□□ -0.83
TOPBP1-202ENST00000503338 GRAPQ13588 217 aa9.88□□□□□ -0.83
TOPBP1-202ENST00000503338 GRAPLQ8TC17 118 aaPredicted RBP9.88□□□□□ -0.83
TOPBP1-202ENST00000503338 RPGRQ92834 1020 aaKnown RBP9.88□□□□□ -0.83
TOPBP1-202ENST00000503338 HAUS7Q99871 368 aa9.88□□□□□ -0.83
TOPBP1-202ENST00000503338 DBNDD2Q9BQY9 259 aa9.88□□□□□ -0.83
TOPBP1-202ENST00000503338 BRIP1Q9BX63 1249 aa9.88□□□□□ -0.83
TOPBP1-202ENST00000503338 MMP10P09238 476 aa9.87□□□□□ -0.83
TOPBP1-202ENST00000503338 FGFR2P21802 821 aa9.87□□□□□ -0.83
TOPBP1-202ENST00000503338 TIMM10P62072 90 aa9.87□□□□□ -0.83
TOPBP1-202ENST00000503338 CHRNDQ07001 517 aa9.87□□□□□ -0.83
TOPBP1-202ENST00000503338 DDR1Q08345 913 aa9.87□□□□□ -0.83
TOPBP1-202ENST00000503338 UBE4AQ14139 1066 aa9.87□□□□□ -0.83
TOPBP1-202ENST00000503338 TTC39AQ5SRH9 613 aa9.87□□□□□ -0.83
TOPBP1-202ENST00000503338 TSHZ3Q63HK5 1081 aa9.87□□□□□ -0.83
TOPBP1-202ENST00000503338 XAGE2Q96GT9 111 aa9.87□□□□□ -0.83
TOPBP1-202ENST00000503338 CRAMP1Q96RY5 1269 aa9.87□□□□□ -0.83
TOPBP1-202ENST00000503338 BOLA2Q9H3K6 86 aa9.87□□□□□ -0.83
TOPBP1-202ENST00000503338 ANO8Q9HCE9 1232 aaPredicted RBP9.87□□□□□ -0.83
TOPBP1-202ENST00000503338 TLR7Q9NYK1 1049 aaKnown RBP9.87□□□□□ -0.83
TOPBP1-202ENST00000503338 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.87□□□□□ -0.83
TOPBP1-202ENST00000503338 BBOX1O75936 387 aa9.86□□□□□ -0.83
TOPBP1-202ENST00000503338 CHMLP26374 656 aa9.86□□□□□ -0.83
TOPBP1-202ENST00000503338 HOXA10P31260 410 aaPredicted RBP9.86□□□□□ -0.83
TOPBP1-202ENST00000503338 MFAP1P55081 439 aaKnown RBP9.86□□□□□ -0.83
TOPBP1-202ENST00000503338 C3orf67Q6ZVT6 689 aa9.86□□□□□ -0.83
TOPBP1-202ENST00000503338 DEFB132Q7Z7B7 95 aa9.86□□□□□ -0.83
TOPBP1-202ENST00000503338 IL27Q8NEV9 243 aa9.86□□□□□ -0.83
TOPBP1-202ENST00000503338 DDRGK1Q96HY6 314 aa9.86□□□□□ -0.83
TOPBP1-202ENST00000503338 DIAPH3Q9NSV4 1193 aa9.86□□□□□ -0.83
TOPBP1-202ENST00000503338 RNF216Q9NWF9 866 aaPredicted RBP9.86□□□□□ -0.83
TOPBP1-202ENST00000503338 MINPP1Q9UNW1 487 aa9.86□□□□□ -0.83
TOPBP1-202ENST00000503338 RAD50Q92878 1312 aa9.85□□□□□ -0.83
TOPBP1-202ENST00000503338 ZBTB22O15209 634 aa9.85□□□□□ -0.83
TOPBP1-202ENST00000503338 ALDH1B1P30837 517 aa9.85□□□□□ -0.83
TOPBP1-202ENST00000503338 TTF1Q15361 905 aaPredicted RBP9.85□□□□□ -0.83
TOPBP1-202ENST00000503338 CELF1Q92879 486 aaKnown RBP9.85□□□□□ -0.83
TOPBP1-202ENST00000503338 TBC1D32Q96NH3 1257 aa9.85□□□□□ -0.83
TOPBP1-202ENST00000503338 ESYT1Q9BSJ8 1104 aa9.85□□□□□ -0.83
TOPBP1-202ENST00000503338 FSD1Q9BTV5 496 aa9.85□□□□□ -0.83
TOPBP1-202ENST00000503338 GNL3LQ9NVN8 582 aaKnown RBP9.85□□□□□ -0.83
TOPBP1-202ENST00000503338 LEMD3Q9Y2U8 911 aa9.85□□□□□ -0.83
TOPBP1-202ENST00000503338 EP400Q96L91 3159 aa9.85□□□□□ -0.83
TOPBP1-202ENST00000503338 NRXN2Q9P2S2 1712 aa9.85□□□□□ -0.83
TOPBP1-202ENST00000503338 TUBGCP6Q96RT7 1819 aa9.84□□□□□ -0.83
TOPBP1-202ENST00000503338 IGSF3O75054 1194 aa9.84□□□□□ -0.83
TOPBP1-202ENST00000503338 ZFYP08048 801 aaPredicted RBP9.84□□□□□ -0.83
TOPBP1-202ENST00000503338 NPR1P16066 1061 aa9.84□□□□□ -0.83
TOPBP1-202ENST00000503338 MCCP23508 829 aa9.84□□□□□ -0.83
TOPBP1-202ENST00000503338 ARID4AP29374 1257 aaPredicted RBP9.84□□□□□ -0.83
TOPBP1-202ENST00000503338 KCNJ4P48050 445 aa9.84□□□□□ -0.83
TOPBP1-202ENST00000503338 RBM25P49756 843 aaKnown RBP9.84□□□□□ -0.83
TOPBP1-202ENST00000503338 CAVIN4Q5BKX8 364 aa9.84□□□□□ -0.83
TOPBP1-202ENST00000503338 KIAA1211Q6ZU35 1233 aa9.84□□□□□ -0.83
TOPBP1-202ENST00000503338 KBTBD3Q8NAB2 608 aa9.84□□□□□ -0.83
TOPBP1-202ENST00000503338 C22orf23Q9BZE7 217 aa9.84□□□□□ -0.83
TOPBP1-202ENST00000503338 TMX4Q9H1E5 349 aaPredicted RBP9.84□□□□□ -0.83
TOPBP1-202ENST00000503338 PAG1Q9NWQ8 432 aa9.84□□□□□ -0.83
TOPBP1-202ENST00000503338 SPEF2Q9C093 1822 aa9.84□□□□□ -0.83
TOPBP1-202ENST00000503338 SEMA3EO15041 775 aa9.83□□□□□ -0.84
TOPBP1-202ENST00000503338 SEC24BO95487 1268 aa9.83□□□□□ -0.84
TOPBP1-202ENST00000503338 MAP4K4O95819 1239 aaPredicted RBP9.83□□□□□ -0.84
TOPBP1-202ENST00000503338 CCDC102BQ68D86 513 aa9.83□□□□□ -0.84
TOPBP1-202ENST00000503338 ZSCAN25Q6NSZ9 544 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms