RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 KCNA3P22001 575 aa25.21■■□□□ 1.63
CDC42SE2-206ENST00000503291 SPEF2Q9C093 1822 aa25.21■■□□□ 1.63
CDC42SE2-206ENST00000503291 LRP5O75197 1615 aa25.2■■□□□ 1.62
CDC42SE2-206ENST00000503291 SMARCA5O60264 1052 aaPredicted RBP25.2■■□□□ 1.62
CDC42SE2-206ENST00000503291 NUCB1Q02818 461 aa25.2■■□□□ 1.62
CDC42SE2-206ENST00000503291 TFCP2Q12800 502 aa25.2■■□□□ 1.62
CDC42SE2-206ENST00000503291 CNKSR1Q969H4 720 aa25.2■■□□□ 1.62
CDC42SE2-206ENST00000503291 BCL11AQ9H165 835 aa25.2■■□□□ 1.62
CDC42SE2-206ENST00000503291 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.2■■□□□ 1.62
CDC42SE2-206ENST00000503291 IL1RAPL2Q9NP60 686 aa25.19■■□□□ 1.62
CDC42SE2-206ENST00000503291 MINPP1Q9UNW1 487 aa25.19■■□□□ 1.62
CDC42SE2-206ENST00000503291 MROH5Q6ZUA9 1318 aa25.19■■□□□ 1.62
CDC42SE2-206ENST00000503291 METTL24Q5JXM2 366 aa25.19■■□□□ 1.62
CDC42SE2-206ENST00000503291 CEP126Q9P2H0 1117 aa25.19■■□□□ 1.62
CDC42SE2-206ENST00000503291 CHD1LQ86WJ1 897 aa25.18■■□□□ 1.62
CDC42SE2-206ENST00000503291 ZBTB47Q9UFB7 747 aaPredicted RBP25.18■■□□□ 1.62
CDC42SE2-206ENST00000503291 SRCAPQ6ZRS2 3230 aa25.17■■□□□ 1.62
CDC42SE2-206ENST00000503291 CHRNDQ07001 517 aa25.17■■□□□ 1.62
CDC42SE2-206ENST00000503291 HELBQ8NG08 1087 aaPredicted RBP25.17■■□□□ 1.62
CDC42SE2-206ENST00000503291 LNPKQ9C0E8 428 aa25.17■■□□□ 1.62
CDC42SE2-206ENST00000503291 PPEF1O14829 653 aaPredicted RBP25.17■■□□□ 1.62
CDC42SE2-206ENST00000503291 PRPF40BQ6NWY9 871 aaKnown RBP25.17■■□□□ 1.62
CDC42SE2-206ENST00000503291 TMC4Q7Z404 712 aa25.17■■□□□ 1.62
CDC42SE2-206ENST00000503291 SLC51AQ86UW1 340 aa25.16■■□□□ 1.62
CDC42SE2-206ENST00000503291 TTLL6Q8N841 843 aa25.16■■□□□ 1.62
CDC42SE2-206ENST00000503291 VGLL2Q8N8G2 317 aa25.16■■□□□ 1.62
CDC42SE2-206ENST00000503291 DLEC1Q9Y238 1755 aa25.16■■□□□ 1.62
CDC42SE2-206ENST00000503291 PDE8BO95263 885 aa25.15■■□□□ 1.62
CDC42SE2-206ENST00000503291 FHDC1Q9C0D6 1143 aaPredicted RBP25.15■■□□□ 1.62
CDC42SE2-206ENST00000503291 KIAA1551Q9HCM1 1747 aa25.15■■□□□ 1.62
CDC42SE2-206ENST00000503291 TAF5LO75529 589 aa25.15■■□□□ 1.62
CDC42SE2-206ENST00000503291 SP8Q8IXZ3 490 aa25.15■■□□□ 1.62
CDC42SE2-206ENST00000503291 CLASRPQ8N2M8 674 aaKnown RBP25.15■■□□□ 1.62
CDC42SE2-206ENST00000503291 PIM2Q9P1W9 311 aa25.15■■□□□ 1.62
CDC42SE2-206ENST00000503291 ATP6V0A2Q9Y487 856 aa25.15■■□□□ 1.62
CDC42SE2-206ENST00000503291 NLGN2Q8NFZ4 835 aa25.14■■□□□ 1.62
CDC42SE2-206ENST00000503291 C16orf71Q8IYS4 520 aaPredicted RBP25.13■■□□□ 1.61
CDC42SE2-206ENST00000503291 SLX4Q8IY92 1834 aa25.13■■□□□ 1.61
CDC42SE2-206ENST00000503291 CACNA1SQ13698 1873 aa25.13■■□□□ 1.61
CDC42SE2-206ENST00000503291 ANKRD2Q9GZV1 360 aa25.13■■□□□ 1.61
CDC42SE2-206ENST00000503291 TNNI3KQ59H18 835 aa25.12■■□□□ 1.61
CDC42SE2-206ENST00000503291 EAF2Q96CJ1 260 aaPredicted RBP25.12■■□□□ 1.61
CDC42SE2-206ENST00000503291 GPR108Q9NPR9 543 aa25.12■■□□□ 1.61
CDC42SE2-206ENST00000503291 FPGT-TNNI3KV9GXZ4 949 aa25.12■■□□□ 1.61
CDC42SE2-206ENST00000503291 AKAP2Q9Y2D5 859 aa25.12■■□□□ 1.61
CDC42SE2-206ENST00000503291 TIMM10P62072 90 aa25.11■■□□□ 1.61
CDC42SE2-206ENST00000503291 OLFM4Q6UX06 510 aa25.11■■□□□ 1.61
CDC42SE2-206ENST00000503291 SKAP1Q86WV1 359 aa25.11■■□□□ 1.61
CDC42SE2-206ENST00000503291 C7orf43Q8WVR3 580 aa25.11■■□□□ 1.61
CDC42SE2-206ENST00000503291 ANKIB1Q9P2G1 1089 aa25.11■■□□□ 1.61
CDC42SE2-206ENST00000503291 WWC3Q9ULE0 1092 aa25.11■■□□□ 1.61
CDC42SE2-206ENST00000503291 GOLGB1Q14789 3259 aaKnown RBP25.11■■□□□ 1.61
CDC42SE2-206ENST00000503291 SNAP23O00161 211 aa25.1■■□□□ 1.61
CDC42SE2-206ENST00000503291 AACSQ86V21 672 aa25.1■■□□□ 1.61
CDC42SE2-206ENST00000503291 TMX4Q9H1E5 349 aaPredicted RBP25.1■■□□□ 1.61
CDC42SE2-206ENST00000503291 ZNF219Q9P2Y4 722 aaPredicted RBP25.1■■□□□ 1.61
CDC42SE2-206ENST00000503291 NSFL1CQ9UNZ2 370 aaKnown RBP25.1■■□□□ 1.61
CDC42SE2-206ENST00000503291 SYT17Q9BSW7 474 aa25.1■■□□□ 1.61
CDC42SE2-206ENST00000503291 A0A1B0GUL7 405 aa25.09■■□□□ 1.61
CDC42SE2-206ENST00000503291 GPSM2P81274 684 aa25.09■■□□□ 1.61
CDC42SE2-206ENST00000503291 PUM3Q15397 648 aaKnown RBP25.09■■□□□ 1.61
CDC42SE2-206ENST00000503291 CCDC8Q9H0W5 538 aaPredicted RBP25.09■■□□□ 1.61
CDC42SE2-206ENST00000503291 WTIPA6NIX2 430 aaPredicted RBP25.08■■□□□ 1.61
CDC42SE2-206ENST00000503291 ATP2B3Q16720 1220 aa25.08■■□□□ 1.61
CDC42SE2-206ENST00000503291 DALRD3Q5D0E6 543 aaKnown RBP25.08■■□□□ 1.61
CDC42SE2-206ENST00000503291 NEUROD6Q96NK8 337 aa25.08■■□□□ 1.61
CDC42SE2-206ENST00000503291 XDHP47989 1333 aa25.08■■□□□ 1.61
CDC42SE2-206ENST00000503291 C21orf2O43822 256 aa25.08■■□□□ 1.61
CDC42SE2-206ENST00000503291 FGFR2P21802 821 aa25.08■■□□□ 1.61
CDC42SE2-206ENST00000503291 PDE4AP27815 886 aa25.08■■□□□ 1.61
CDC42SE2-206ENST00000503291 OTUD7AQ8TE49 926 aaPredicted RBP25.08■■□□□ 1.61
CDC42SE2-206ENST00000503291 IFIT2P09913 472 aaKnown RBP25.07■■□□□ 1.6
CDC42SE2-206ENST00000503291 PODXL2Q9NZ53 605 aa25.07■■□□□ 1.6
CDC42SE2-206ENST00000503291 LRRC37AA6NMS7 1700 aa25.07■■□□□ 1.6
CDC42SE2-206ENST00000503291 BRCA1P38398 1863 aaKnown RBP25.07■■□□□ 1.6
CDC42SE2-206ENST00000503291 UBE4AQ14139 1066 aa25.07■■□□□ 1.6
CDC42SE2-206ENST00000503291 LPIN2Q92539 896 aa25.07■■□□□ 1.6
CDC42SE2-206ENST00000503291 A0A1B0GUL6 1792 aa25.06■■□□□ 1.6
CDC42SE2-206ENST00000503291 MPNDQ8N594 471 aa25.06■■□□□ 1.6
CDC42SE2-206ENST00000503291 LEMD3Q9Y2U8 911 aa25.06■■□□□ 1.6
CDC42SE2-206ENST00000503291 ZNF609O15014 1411 aa25.06■■□□□ 1.6
CDC42SE2-206ENST00000503291 KCNJ4P48050 445 aa25.05■■□□□ 1.6
CDC42SE2-206ENST00000503291 CC2D2BQ6DHV5 1058 aa25.05■■□□□ 1.6
CDC42SE2-206ENST00000503291 TLR7Q9NYK1 1049 aaKnown RBP25.05■■□□□ 1.6
CDC42SE2-206ENST00000503291 DBNLQ9UJU6 430 aaKnown RBP25.05■■□□□ 1.6
CDC42SE2-206ENST00000503291 ZNF804BA4D1E1 1349 aa25.05■■□□□ 1.6
CDC42SE2-206ENST00000503291 DBNDD2Q9BQY9 259 aa25.05■■□□□ 1.6
CDC42SE2-206ENST00000503291 XAGE2Q96GT9 111 aa25.04■■□□□ 1.6
CDC42SE2-206ENST00000503291 GGA1Q9UJY5 639 aa25.04■■□□□ 1.6
CDC42SE2-206ENST00000503291 BCS1LQ9Y276 419 aa25.04■■□□□ 1.6
CDC42SE2-206ENST00000503291 IFIT1P09914 478 aaKnown RBP25.03■■□□□ 1.6
CDC42SE2-206ENST00000503291 SLC5A1P13866 664 aa25.03■■□□□ 1.6
CDC42SE2-206ENST00000503291 DPP8Q6V1X1 898 aaPredicted RBP25.03■■□□□ 1.6
CDC42SE2-206ENST00000503291 UFL1O94874 794 aa25.03■■□□□ 1.6
CDC42SE2-206ENST00000503291 ATP2B4P23634 1241 aa25.03■■□□□ 1.6
CDC42SE2-206ENST00000503291 ADORA1P30542 326 aa25.03■■□□□ 1.6
CDC42SE2-206ENST00000503291 RGS3P49796 1198 aa25.03■■□□□ 1.6
CDC42SE2-206ENST00000503291 PLEKHM2Q8IWE5 1019 aa25.03■■□□□ 1.6
CDC42SE2-206ENST00000503291 TBC1D16Q8TBP0 767 aa25.03■■□□□ 1.6
CDC42SE2-206ENST00000503291 POLLQ9UGP5 575 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms