RNA–Protein interactions for RNA: ENST00000503139.5

EXOSC9-203, Transcript of exosome component 9, humanhuman

TSL 1 (best)

Gene EXOSC9, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-203ENST00000503139 HDLBPQ00341 1268 aaKnown RBP13.2□□□□□ -0.3
EXOSC9-203ENST00000503139 FOXR1Q6PIV2 292 aa13.2□□□□□ -0.3
EXOSC9-203ENST00000503139 SV2AQ7L0J3 742 aa13.2□□□□□ -0.3
EXOSC9-203ENST00000503139 BCO2Q9BYV7 579 aa13.2□□□□□ -0.3
EXOSC9-203ENST00000503139 A0A1W2PP55 124 aa13.19□□□□□ -0.3
EXOSC9-203ENST00000503139 GRM2Q14416 872 aa13.19□□□□□ -0.3
EXOSC9-203ENST00000503139 DHX32Q7L7V1 743 aaKnown RBP13.19□□□□□ -0.3
EXOSC9-203ENST00000503139 SRCIN1Q9C0H9 1055 aa13.19□□□□□ -0.3
EXOSC9-203ENST00000503139 METTL5Q9NRN9 209 aaKnown RBP13.19□□□□□ -0.3
EXOSC9-203ENST00000503139 GADD45BO75293 160 aaPredicted RBP13.18□□□□□ -0.3
EXOSC9-203ENST00000503139 FANCCQ00597 558 aa13.18□□□□□ -0.3
EXOSC9-203ENST00000503139 PLAURQ03405 335 aa13.18□□□□□ -0.3
EXOSC9-203ENST00000503139 NXPE4Q6UWF7 544 aa13.18□□□□□ -0.3
EXOSC9-203ENST00000503139 GLIS3Q8NEA6 775 aa13.18□□□□□ -0.3
EXOSC9-203ENST00000503139 FAM8A1Q9UBU6 413 aa13.18□□□□□ -0.3
EXOSC9-203ENST00000503139 C2CD2LO14523 706 aa13.17□□□□□ -0.3
EXOSC9-203ENST00000503139 METTL16Q86W50 562 aaKnown RBP13.17□□□□□ -0.3
EXOSC9-203ENST00000503139 NRLP54845 237 aa13.16□□□□□ -0.3
EXOSC9-203ENST00000503139 HYAL2Q12891 473 aa13.16□□□□□ -0.3
EXOSC9-203ENST00000503139 NEUROD1Q13562 356 aa13.16□□□□□ -0.3
EXOSC9-203ENST00000503139 CNTNAP3BQ96NU0 1288 aa13.16□□□□□ -0.3
EXOSC9-203ENST00000503139 CNTNAP3Q9BZ76 1288 aa13.16□□□□□ -0.3
EXOSC9-203ENST00000503139 USP17L7P0C7H9 530 aa13.15□□□□□ -0.3
EXOSC9-203ENST00000503139 ZNF468Q5VIY5 522 aaPredicted RBP13.15□□□□□ -0.3
EXOSC9-203ENST00000503139 TRPM4Q8TD43 1214 aa13.15□□□□□ -0.3
EXOSC9-203ENST00000503139 ZBTB42B2RXF5 422 aa13.14□□□□□ -0.31
EXOSC9-203ENST00000503139 ACPPP15309 386 aa13.14□□□□□ -0.31
EXOSC9-203ENST00000503139 GPLD1P80108 840 aa13.14□□□□□ -0.31
EXOSC9-203ENST00000503139 PRPF40BQ6NWY9 871 aaKnown RBP13.14□□□□□ -0.31
EXOSC9-203ENST00000503139 NCAPG2Q86XI2 1143 aa13.14□□□□□ -0.31
EXOSC9-203ENST00000503139 CEP120Q8N960 986 aa13.14□□□□□ -0.31
EXOSC9-203ENST00000503139 NSUN5Q96P11 429 aaKnown RBP13.14□□□□□ -0.31
EXOSC9-203ENST00000503139 EHD4Q9H223 541 aa13.14□□□□□ -0.31
EXOSC9-203ENST00000503139 GAS6Q14393 721 aa13.13□□□□□ -0.31
EXOSC9-203ENST00000503139 SYT9Q86SS6 491 aa13.13□□□□□ -0.31
EXOSC9-203ENST00000503139 ZKSCAN3Q9BRR0 538 aa13.13□□□□□ -0.31
EXOSC9-203ENST00000503139 PRR12Q9ULL5 1215 aa13.13□□□□□ -0.31
EXOSC9-203ENST00000503139 USP31Q70CQ4 1352 aa13.12□□□□□ -0.31
EXOSC9-203ENST00000503139 ZNF76P36508 570 aa13.12□□□□□ -0.31
EXOSC9-203ENST00000503139 RAD51AP2Q09MP3 1159 aa13.12□□□□□ -0.31
EXOSC9-203ENST00000503139 C9orf131Q5VYM1 1079 aa13.12□□□□□ -0.31
EXOSC9-203ENST00000503139 C3orf58Q8NDZ4 430 aa13.12□□□□□ -0.31
EXOSC9-203ENST00000503139 TCF12Q99081 682 aa13.12□□□□□ -0.31
EXOSC9-203ENST00000503139 TRAK1Q9UPV9 953 aa13.12□□□□□ -0.31
EXOSC9-203ENST00000503139 SIN3BO75182 1162 aa13.11□□□□□ -0.31
EXOSC9-203ENST00000503139 BMP4P12644 408 aa13.11□□□□□ -0.31
EXOSC9-203ENST00000503139 MEI1Q5TIA1 1274 aa13.11□□□□□ -0.31
EXOSC9-203ENST00000503139 RNF34Q969K3 372 aa13.11□□□□□ -0.31
EXOSC9-203ENST00000503139 ABCB6Q9NP58 842 aa13.11□□□□□ -0.31
EXOSC9-203ENST00000503139 AVENQ9NQS1 362 aaPredicted RBP13.11□□□□□ -0.31
EXOSC9-203ENST00000503139 DZANK1Q9NVP4 752 aa13.11□□□□□ -0.31
EXOSC9-203ENST00000503139 NXF1Q9UBU9 619 aaKnown RBP13.11□□□□□ -0.31
EXOSC9-203ENST00000503139 CCNJLQ8IV13 435 aa13.1□□□□□ -0.31
EXOSC9-203ENST00000503139 OSMRQ99650 979 aa13.1□□□□□ -0.31
EXOSC9-203ENST00000503139 LIN7BQ9HAP6 207 aa13.1□□□□□ -0.31
EXOSC9-203ENST00000503139 NFKBIEO00221 500 aa13.09□□□□□ -0.31
EXOSC9-203ENST00000503139 ERCC5P28715 1186 aaPredicted RBP13.09□□□□□ -0.31
EXOSC9-203ENST00000503139 GSTT1P30711 240 aa13.09□□□□□ -0.31
EXOSC9-203ENST00000503139 ST13P50502 369 aaKnown RBP13.09□□□□□ -0.31
EXOSC9-203ENST00000503139 NT5DC4Q86YG4 428 aa13.09□□□□□ -0.31
EXOSC9-203ENST00000503139 NPAS3Q8IXF0 933 aa13.09□□□□□ -0.31
EXOSC9-203ENST00000503139 C8orf37Q96NL8 207 aa13.09□□□□□ -0.31
EXOSC9-203ENST00000503139 DNAJB12Q9NXW2 375 aaKnown RBP13.09□□□□□ -0.31
EXOSC9-203ENST00000503139 LOC102724428A0A0B4J2F2 783 aa13.08□□□□□ -0.32
EXOSC9-203ENST00000503139 MX2P20592 715 aa13.08□□□□□ -0.32
EXOSC9-203ENST00000503139 SIK1P57059 783 aa13.08□□□□□ -0.32
EXOSC9-203ENST00000503139 MLLT1Q03111 559 aaPredicted RBP13.08□□□□□ -0.32
EXOSC9-203ENST00000503139 TAF1CQ15572 869 aaPredicted RBP13.08□□□□□ -0.32
EXOSC9-203ENST00000503139 GPR161Q8N6U8 529 aaKnown RBP13.08□□□□□ -0.32
EXOSC9-203ENST00000503139 TNFRSF25Q93038 417 aa13.08□□□□□ -0.32
EXOSC9-203ENST00000503139 KLF15Q9UIH9 416 aa13.08□□□□□ -0.32
EXOSC9-203ENST00000503139 H3BM21 787 aa13.07□□□□□ -0.32
EXOSC9-203ENST00000503139 J3QW42 95 aa13.07□□□□□ -0.32
EXOSC9-203ENST00000503139 TRPA1O75762 1119 aa13.07□□□□□ -0.32
EXOSC9-203ENST00000503139 PCBP4P57723 403 aaKnown RBP13.07□□□□□ -0.32
EXOSC9-203ENST00000503139 HHIPQ96QV1 700 aa13.07□□□□□ -0.32
EXOSC9-203ENST00000503139 MDFIQ99750 246 aa13.07□□□□□ -0.32
EXOSC9-203ENST00000503139 UBE2OQ9C0C9 1292 aaKnown RBP13.07□□□□□ -0.32
EXOSC9-203ENST00000503139 TMEM238LA0A1B0GVL6 79 aa13.06□□□□□ -0.32
EXOSC9-203ENST00000503139 PTPN12Q05209 780 aaKnown RBP13.06□□□□□ -0.32
EXOSC9-203ENST00000503139 BHLHE41Q9C0J9 482 aaPredicted RBP13.06□□□□□ -0.32
EXOSC9-203ENST00000503139 VSIG8P0DPA2 414 aa13.05□□□□□ -0.32
EXOSC9-203ENST00000503139 ARAFP10398 606 aa13.05□□□□□ -0.32
EXOSC9-203ENST00000503139 ZC3H6P61129 1189 aaKnown RBP13.05□□□□□ -0.32
EXOSC9-203ENST00000503139 PCSK7Q16549 785 aa13.05□□□□□ -0.32
EXOSC9-203ENST00000503139 HFE2Q6ZVN8 426 aa13.05□□□□□ -0.32
EXOSC9-203ENST00000503139 TMEM102Q8N9M5 508 aaPredicted RBP13.05□□□□□ -0.32
EXOSC9-203ENST00000503139 SPACA7Q96KW9 195 aa13.05□□□□□ -0.32
EXOSC9-203ENST00000503139 OXCT2Q9BYC2 517 aaPredicted RBP13.05□□□□□ -0.32
EXOSC9-203ENST00000503139 IGFLR1Q9H665 355 aa13.05□□□□□ -0.32
EXOSC9-203ENST00000503139 PPP4R2Q9NY27 417 aa13.05□□□□□ -0.32
EXOSC9-203ENST00000503139 XRCC5P13010 732 aaKnown RBP13.04□□□□□ -0.32
EXOSC9-203ENST00000503139 FCGRTP55899 365 aa13.04□□□□□ -0.32
EXOSC9-203ENST00000503139 ATP11AP98196 1134 aa13.04□□□□□ -0.32
EXOSC9-203ENST00000503139 ANKRD24Q8TF21 1146 aa13.04□□□□□ -0.32
EXOSC9-203ENST00000503139 NXPE3Q969Y0 559 aa13.04□□□□□ -0.32
EXOSC9-203ENST00000503139 RASSF4Q9H2L5 321 aa13.04□□□□□ -0.32
EXOSC9-203ENST00000503139 MBIPQ9NS73 344 aa13.04□□□□□ -0.32
EXOSC9-203ENST00000503139 GRIA4P48058 902 aa13.03□□□□□ -0.32
EXOSC9-203ENST00000503139 PBX4Q9BYU1 374 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms