RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 DDX46Q7L014 1031 aaKnown RBP8.66□□□□□ -1.02
GPATCH4-209ENST00000498641 BOLA2Q9H3K6 86 aa8.66□□□□□ -1.02
GPATCH4-209ENST00000498641 PNPLA7Q6ZV29 1317 aa8.65□□□□□ -1.02
GPATCH4-209ENST00000498641 PDE8BO95263 885 aa8.65□□□□□ -1.02
GPATCH4-209ENST00000498641 TTC39AQ5SRH9 613 aa8.65□□□□□ -1.02
GPATCH4-209ENST00000498641 PRR5LQ6MZQ0 368 aa8.65□□□□□ -1.02
GPATCH4-209ENST00000498641 DEFB132Q7Z7B7 95 aa8.65□□□□□ -1.02
GPATCH4-209ENST00000498641 CCDC125Q86Z20 511 aa8.65□□□□□ -1.02
GPATCH4-209ENST00000498641 HELBQ8NG08 1087 aaPredicted RBP8.65□□□□□ -1.02
GPATCH4-209ENST00000498641 RPGRQ92834 1020 aaKnown RBP8.65□□□□□ -1.02
GPATCH4-209ENST00000498641 EVI5LQ96CN4 794 aa8.65□□□□□ -1.02
GPATCH4-209ENST00000498641 XAGE2Q96GT9 111 aa8.65□□□□□ -1.02
GPATCH4-209ENST00000498641 PARP3Q9Y6F1 533 aa8.65□□□□□ -1.02
GPATCH4-209ENST00000498641 POLRMTO00411 1230 aaKnown RBP8.64□□□□□ -1.03
GPATCH4-209ENST00000498641 TAF5LO75529 589 aa8.64□□□□□ -1.03
GPATCH4-209ENST00000498641 SLC5A1P13866 664 aa8.64□□□□□ -1.03
GPATCH4-209ENST00000498641 CHMLP26374 656 aa8.64□□□□□ -1.03
GPATCH4-209ENST00000498641 RPS8P62241 208 aaKnown RBP8.64□□□□□ -1.03
GPATCH4-209ENST00000498641 DDR1Q08345 913 aa8.64□□□□□ -1.03
GPATCH4-209ENST00000498641 PUM3Q15397 648 aaKnown RBP8.64□□□□□ -1.03
GPATCH4-209ENST00000498641 MSL1Q68DK7 614 aa8.64□□□□□ -1.03
GPATCH4-209ENST00000498641 LPIN2Q92539 896 aa8.64□□□□□ -1.03
GPATCH4-209ENST00000498641 DNAJC2Q99543 621 aaKnown RBP8.64□□□□□ -1.03
GPATCH4-209ENST00000498641 C22orf23Q9BZE7 217 aa8.64□□□□□ -1.03
GPATCH4-209ENST00000498641 ANO8Q9HCE9 1232 aaPredicted RBP8.64□□□□□ -1.03
GPATCH4-209ENST00000498641 DIAPH3Q9NSV4 1193 aa8.64□□□□□ -1.03
GPATCH4-209ENST00000498641 BSDC1Q9NW68 430 aaPredicted RBP8.64□□□□□ -1.03
GPATCH4-209ENST00000498641 ZNF609O15014 1411 aa8.63□□□□□ -1.03
GPATCH4-209ENST00000498641 REC8O95072 547 aa8.63□□□□□ -1.03
GPATCH4-209ENST00000498641 MMP10P09238 476 aa8.63□□□□□ -1.03
GPATCH4-209ENST00000498641 IFIT1P09914 478 aaKnown RBP8.63□□□□□ -1.03
GPATCH4-209ENST00000498641 ADORA1P30542 326 aa8.63□□□□□ -1.03
GPATCH4-209ENST00000498641 CHRNDQ07001 517 aa8.63□□□□□ -1.03
GPATCH4-209ENST00000498641 VGLL2Q8N8G2 317 aa8.63□□□□□ -1.03
GPATCH4-209ENST00000498641 RUFY2Q8WXA3 655 aa8.63□□□□□ -1.03
GPATCH4-209ENST00000498641 CELF1Q92879 486 aaKnown RBP8.63□□□□□ -1.03
GPATCH4-209ENST00000498641 RBM17Q96I25 401 aaKnown RBP8.63□□□□□ -1.03
GPATCH4-209ENST00000498641 HAUS7Q99871 368 aa8.63□□□□□ -1.03
GPATCH4-209ENST00000498641 FSD1Q9BTV5 496 aa8.63□□□□□ -1.03
GPATCH4-209ENST00000498641 TNS1Q9HBL0 1735 aaKnown RBP8.63□□□□□ -1.03
GPATCH4-209ENST00000498641 RIC1Q4ADV7 1423 aa8.63□□□□□ -1.03
GPATCH4-209ENST00000498641 UBR3Q6ZT12 1888 aa8.62□□□□□ -1.03
GPATCH4-209ENST00000498641 HIP1O00291 1037 aa8.62□□□□□ -1.03
GPATCH4-209ENST00000498641 KCNJ4P48050 445 aa8.62□□□□□ -1.03
GPATCH4-209ENST00000498641 GRAPQ13588 217 aa8.62□□□□□ -1.03
GPATCH4-209ENST00000498641 GRAPLQ8TC17 118 aaPredicted RBP8.62□□□□□ -1.03
GPATCH4-209ENST00000498641 TBC1D32Q96NH3 1257 aa8.62□□□□□ -1.03
GPATCH4-209ENST00000498641 ESYT1Q9BSJ8 1104 aa8.62□□□□□ -1.03
GPATCH4-209ENST00000498641 ANKRD2Q9GZV1 360 aa8.62□□□□□ -1.03
GPATCH4-209ENST00000498641 MINPP1Q9UNW1 487 aa8.62□□□□□ -1.03
GPATCH4-209ENST00000498641 C4AP0C0L4 1744 aa8.62□□□□□ -1.03
GPATCH4-209ENST00000498641 GOLIM4O00461 696 aa8.61□□□□□ -1.03
GPATCH4-209ENST00000498641 UQCRFS1P1P0C7P4 283 aa8.61□□□□□ -1.03
GPATCH4-209ENST00000498641 FGFR2P21802 821 aa8.61□□□□□ -1.03
GPATCH4-209ENST00000498641 FKBP4Q02790 459 aaKnown RBP eCLIP8.61□□□□□ -1.03
GPATCH4-209ENST00000498641 CWC27Q6UX04 472 aaKnown RBP8.61□□□□□ -1.03
GPATCH4-209ENST00000498641 KIAA1211Q6ZU35 1233 aa8.61□□□□□ -1.03
GPATCH4-209ENST00000498641 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.61□□□□□ -1.03
GPATCH4-209ENST00000498641 EDC3Q96F86 508 aaKnown RBP8.61□□□□□ -1.03
GPATCH4-209ENST00000498641 DDRGK1Q96HY6 314 aa8.61□□□□□ -1.03
GPATCH4-209ENST00000498641 BRIP1Q9BX63 1249 aa8.61□□□□□ -1.03
GPATCH4-209ENST00000498641 SNRKQ9NRH2 765 aa8.61□□□□□ -1.03
GPATCH4-209ENST00000498641 PAG1Q9NWQ8 432 aa8.61□□□□□ -1.03
GPATCH4-209ENST00000498641 NDUFB9Q9Y6M9 179 aa8.61□□□□□ -1.03
GPATCH4-209ENST00000498641 COL24A1Q17RW2 1714 aa8.6□□□□□ -1.03
GPATCH4-209ENST00000498641 DDX60Q8IY21 1712 aaKnown RBP8.6□□□□□ -1.03
GPATCH4-209ENST00000498641 SNAP23O00161 211 aa8.6□□□□□ -1.03
GPATCH4-209ENST00000498641 PDE6BP35913 854 aa8.6□□□□□ -1.03
GPATCH4-209ENST00000498641 UBE4AQ14139 1066 aa8.6□□□□□ -1.03
GPATCH4-209ENST00000498641 CRY2Q49AN0 593 aa8.6□□□□□ -1.03
GPATCH4-209ENST00000498641 CCDC102BQ68D86 513 aa8.6□□□□□ -1.03
GPATCH4-209ENST00000498641 VPS37DQ86XT2 251 aa8.6□□□□□ -1.03
GPATCH4-209ENST00000498641 USP26Q9BXU7 913 aa8.6□□□□□ -1.03
GPATCH4-209ENST00000498641 ANO2Q9NQ90 1003 aa8.6□□□□□ -1.03
GPATCH4-209ENST00000498641 GNL3LQ9NVN8 582 aaKnown RBP8.6□□□□□ -1.03
GPATCH4-209ENST00000498641 ANKIB1Q9P2G1 1089 aa8.6□□□□□ -1.03
GPATCH4-209ENST00000498641 DAXXQ9UER7 740 aaPredicted RBP8.6□□□□□ -1.03
GPATCH4-209ENST00000498641 RGPD3A6NKT7 1758 aaPredicted RBP8.6□□□□□ -1.03
GPATCH4-209ENST00000498641 RGPD4Q7Z3J3 1758 aa8.6□□□□□ -1.03
GPATCH4-209ENST00000498641 LAMB2P55268 1798 aa8.59□□□□□ -1.03
GPATCH4-209ENST00000498641 BBOX1O75936 387 aa8.59□□□□□ -1.03
GPATCH4-209ENST00000498641 MCCP23508 829 aa8.59□□□□□ -1.03
GPATCH4-209ENST00000498641 ZAP70P43403 619 aa8.59□□□□□ -1.03
GPATCH4-209ENST00000498641 PHKA1P46020 1223 aa8.59□□□□□ -1.03
GPATCH4-209ENST00000498641 BCAMP50895 628 aa8.59□□□□□ -1.03
GPATCH4-209ENST00000498641 NMIQ13287 307 aaPredicted RBP8.59□□□□□ -1.03
GPATCH4-209ENST00000498641 LRRFIP1Q32MZ4 808 aaKnown RBP8.59□□□□□ -1.03
GPATCH4-209ENST00000498641 CAVIN4Q5BKX8 364 aa8.59□□□□□ -1.03
GPATCH4-209ENST00000498641 KBTBD3Q8NAB2 608 aa8.59□□□□□ -1.03
GPATCH4-209ENST00000498641 ZNF512BQ96KM6 892 aaPredicted RBP8.59□□□□□ -1.03
GPATCH4-209ENST00000498641 IPO9Q96P70 1041 aaKnown RBP8.59□□□□□ -1.03
GPATCH4-209ENST00000498641 CRAMP1Q96RY5 1269 aa8.59□□□□□ -1.03
GPATCH4-209ENST00000498641 LRP5O75197 1615 aa8.58□□□□□ -1.04
GPATCH4-209ENST00000498641 KLRG2A4D1S0 409 aaPredicted RBP8.58□□□□□ -1.04
GPATCH4-209ENST00000498641 SGSM2O43147 1006 aa8.58□□□□□ -1.04
GPATCH4-209ENST00000498641 NPR1P16066 1061 aa8.58□□□□□ -1.04
GPATCH4-209ENST00000498641 ARID4AP29374 1257 aaPredicted RBP8.58□□□□□ -1.04
GPATCH4-209ENST00000498641 ALDH1B1P30837 517 aa8.58□□□□□ -1.04
GPATCH4-209ENST00000498641 HOXA10P31260 410 aaPredicted RBP8.58□□□□□ -1.04
GPATCH4-209ENST00000498641 RBM25P49756 843 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms