RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 POLA2Q14181 598 aa18.01■□□□□ 0.47
USP11-212ENST00000497179 LDHAL6AQ6ZMR3 332 aa18.01■□□□□ 0.47
USP11-212ENST00000497179 KLHDC4Q8TBB5 520 aa18.01■□□□□ 0.47
USP11-212ENST00000497179 SSH3Q8TE77 659 aa18.01■□□□□ 0.47
USP11-212ENST00000497179 PSMD1Q99460 953 aa18.01■□□□□ 0.47
USP11-212ENST00000497179 COPRSQ9NQ92 184 aa18.01■□□□□ 0.47
USP11-212ENST00000497179 MINPP1Q9UNW1 487 aa18.01■□□□□ 0.47
USP11-212ENST00000497179 GPSM2P81274 684 aa18■□□□□ 0.47
USP11-212ENST00000497179 FKBP4Q02790 459 aaKnown RBP eCLIP18■□□□□ 0.47
USP11-212ENST00000497179 DPP8Q6V1X1 898 aaPredicted RBP18■□□□□ 0.47
USP11-212ENST00000497179 RPAP2Q8IXW5 612 aaPredicted RBP18■□□□□ 0.47
USP11-212ENST00000497179 MPNDQ8N594 471 aa18■□□□□ 0.47
USP11-212ENST00000497179 TAOK3Q9H2K8 898 aa18■□□□□ 0.47
USP11-212ENST00000497179 CNNM1Q9NRU3 951 aa18■□□□□ 0.47
USP11-212ENST00000497179 PODXL2Q9NZ53 605 aa18■□□□□ 0.47
USP11-212ENST00000497179 FBXO3Q9UK99 471 aa18■□□□□ 0.47
USP11-212ENST00000497179 XDHP47989 1333 aa17.99■□□□□ 0.47
USP11-212ENST00000497179 RASSF7Q02833 373 aa17.99■□□□□ 0.47
USP11-212ENST00000497179 AAMPQ13685 434 aa17.99■□□□□ 0.47
USP11-212ENST00000497179 RTFDC1Q9BY42 306 aaPredicted RBP17.99■□□□□ 0.47
USP11-212ENST00000497179 PUS3Q9BZE2 481 aaKnown RBP17.99■□□□□ 0.47
USP11-212ENST00000497179 ANKRD2Q9GZV1 360 aa17.99■□□□□ 0.47
USP11-212ENST00000497179 RIPOR2Q9Y4F9 1068 aa17.99■□□□□ 0.47
USP11-212ENST00000497179 EYA2O00167 538 aa17.98■□□□□ 0.47
USP11-212ENST00000497179 CIAO1O76071 339 aa17.98■□□□□ 0.47
USP11-212ENST00000497179 CHRNDQ07001 517 aa17.98■□□□□ 0.47
USP11-212ENST00000497179 LRRC24Q50LG9 513 aa17.98■□□□□ 0.47
USP11-212ENST00000497179 EXOC6Q8TAG9 804 aa17.98■□□□□ 0.47
USP11-212ENST00000497179 NSFL1CQ9UNZ2 370 aaKnown RBP17.98■□□□□ 0.47
USP11-212ENST00000497179 PA2G4Q9UQ80 394 aaKnown RBP17.98■□□□□ 0.47
USP11-212ENST00000497179 MROH5Q6ZUA9 1318 aa17.98■□□□□ 0.47
USP11-212ENST00000497179 ATG9AQ7Z3C6 839 aa17.97■□□□□ 0.47
USP11-212ENST00000497179 SIRT2Q8IXJ6 389 aa17.97■□□□□ 0.47
USP11-212ENST00000497179 SUPT20HQ8NEM7 779 aa17.97■□□□□ 0.47
USP11-212ENST00000497179 SIL1Q9H173 461 aa17.97■□□□□ 0.47
USP11-212ENST00000497179 ANKIB1Q9P2G1 1089 aa17.97■□□□□ 0.47
USP11-212ENST00000497179 HMMRO75330 724 aa17.96■□□□□ 0.47
USP11-212ENST00000497179 PRELPP51888 382 aa17.96■□□□□ 0.47
USP11-212ENST00000497179 IRX6P78412 446 aaPredicted RBP17.96■□□□□ 0.47
USP11-212ENST00000497179 TBC1D16Q8TBP0 767 aa17.96■□□□□ 0.47
USP11-212ENST00000497179 GGA1Q9UJY5 639 aa17.96■□□□□ 0.47
USP11-212ENST00000497179 UFL1O94874 794 aa17.95■□□□□ 0.46
USP11-212ENST00000497179 LMNB1P20700 586 aa17.95■□□□□ 0.46
USP11-212ENST00000497179 ATP2B4P23634 1241 aa17.95■□□□□ 0.46
USP11-212ENST00000497179 IL15P40933 162 aaPredicted RBP17.95■□□□□ 0.46
USP11-212ENST00000497179 POLLQ9UGP5 575 aa17.95■□□□□ 0.46
USP11-212ENST00000497179 SBF1O95248 1867 aa17.95■□□□□ 0.46
USP11-212ENST00000497179 METTL24Q5JXM2 366 aa17.94■□□□□ 0.46
USP11-212ENST00000497179 VGLL2Q8N8G2 317 aa17.94■□□□□ 0.46
USP11-212ENST00000497179 HELBQ8NG08 1087 aaPredicted RBP17.94■□□□□ 0.46
USP11-212ENST00000497179 VPS33BQ9H267 617 aa17.94■□□□□ 0.46
USP11-212ENST00000497179 ZNF277Q9NRM2 450 aaPredicted RBP17.94■□□□□ 0.46
USP11-212ENST00000497179 LEMD3Q9Y2U8 911 aa17.94■□□□□ 0.46
USP11-212ENST00000497179 NOP58Q9Y2X3 529 aaKnown RBP17.94■□□□□ 0.46
USP11-212ENST00000497179 PCDHB15Q9Y5E8 787 aa17.94■□□□□ 0.46
USP11-212ENST00000497179 TIAM2Q8IVF5 1701 aa17.93■□□□□ 0.46
USP11-212ENST00000497179 C6orf229H3BNL8 230 aa17.93■□□□□ 0.46
USP11-212ENST00000497179 TAF5LO75529 589 aa17.93■□□□□ 0.46
USP11-212ENST00000497179 IARSP41252 1262 aaKnown RBP17.93■□□□□ 0.46
USP11-212ENST00000497179 EYA3Q99504 573 aa17.93■□□□□ 0.46
USP11-212ENST00000497179 ZNF804BA4D1E1 1349 aa17.93■□□□□ 0.46
USP11-212ENST00000497179 COL4A5P29400 1685 aa17.93■□□□□ 0.46
USP11-212ENST00000497179 MED23Q9ULK4 1368 aa17.92■□□□□ 0.46
USP11-212ENST00000497179 SURF6O75683 361 aaKnown RBP17.92■□□□□ 0.46
USP11-212ENST00000497179 PDE8BO95263 885 aa17.92■□□□□ 0.46
USP11-212ENST00000497179 KIAA2012Q0VF49 1180 aa17.92■□□□□ 0.46
USP11-212ENST00000497179 DICER1Q9UPY3 1922 aaKnown RBP17.92■□□□□ 0.46
USP11-212ENST00000497179 WTIPA6NIX2 430 aaPredicted RBP17.91■□□□□ 0.46
USP11-212ENST00000497179 PPIP5K2O43314 1243 aa17.91■□□□□ 0.46
USP11-212ENST00000497179 KCNJ4P48050 445 aa17.91■□□□□ 0.46
USP11-212ENST00000497179 G3BP1Q13283 466 aaKnown RBP eCLIP17.91■□□□□ 0.46
USP11-212ENST00000497179 UBE4AQ14139 1066 aa17.91■□□□□ 0.46
USP11-212ENST00000497179 C9orf131Q5VYM1 1079 aa17.91■□□□□ 0.46
USP11-212ENST00000497179 GPR101Q96P66 508 aaPredicted RBP17.91■□□□□ 0.46
USP11-212ENST00000497179 RNF181Q9P0P0 153 aa17.91■□□□□ 0.46
USP11-212ENST00000497179 IRS2Q9Y4H2 1338 aa17.91■□□□□ 0.46
USP11-212ENST00000497179 CCDC88AQ3V6T2 1871 aa17.9■□□□□ 0.46
USP11-212ENST00000497179 AOC3Q16853 763 aa17.9■□□□□ 0.46
USP11-212ENST00000497179 WASHC4Q2M389 1173 aa17.9■□□□□ 0.46
USP11-212ENST00000497179 CEP126Q9P2H0 1117 aa17.9■□□□□ 0.46
USP11-212ENST00000497179 CHD4Q14839 1912 aa17.9■□□□□ 0.46
USP11-212ENST00000497179 SNAP23O00161 211 aa17.89■□□□□ 0.45
USP11-212ENST00000497179 SASH1O94885 1247 aa17.89■□□□□ 0.45
USP11-212ENST00000497179 FGFR2P21802 821 aa17.89■□□□□ 0.45
USP11-212ENST00000497179 OS9Q13438 667 aaPredicted RBP17.89■□□□□ 0.45
USP11-212ENST00000497179 PUM3Q15397 648 aaKnown RBP17.89■□□□□ 0.45
USP11-212ENST00000497179 HSP90AB4PQ58FF6 505 aa17.89■□□□□ 0.45
USP11-212ENST00000497179 C15orf52Q6ZUT6 534 aaKnown RBP17.89■□□□□ 0.45
USP11-212ENST00000497179 LARGE2Q8N3Y3 721 aa17.89■□□□□ 0.45
USP11-212ENST00000497179 ZC3H12CQ9C0D7 883 aaKnown RBP17.89■□□□□ 0.45
USP11-212ENST00000497179 EXOC6BQ9Y2D4 811 aa17.89■□□□□ 0.45
USP11-212ENST00000497179 ZC3H4Q9UPT8 1303 aaKnown RBP17.89■□□□□ 0.45
USP11-212ENST00000497179 ARAP2Q8WZ64 1704 aa17.89■□□□□ 0.45
USP11-212ENST00000497179 KLRK1P26718 216 aa17.88■□□□□ 0.45
USP11-212ENST00000497179 TFCP2Q12800 502 aa17.88■□□□□ 0.45
USP11-212ENST00000497179 RIMBP2O15034 1052 aa17.87■□□□□ 0.45
USP11-212ENST00000497179 HDAC1Q13547 482 aaPredicted RBP17.87■□□□□ 0.45
USP11-212ENST00000497179 ATP2B3Q16720 1220 aa17.87■□□□□ 0.45
USP11-212ENST00000497179 ERC1Q8IUD2 1116 aa17.87■□□□□ 0.45
USP11-212ENST00000497179 ZNF609O15014 1411 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms