RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 CCDC144BQ3MJ40 725 aa17.57■□□□□ 0.4
MACF1-223ENST00000496360 CCDC144CPQ8IYA2 1237 aa17.57■□□□□ 0.4
MACF1-223ENST00000496360 LTV1Q96GA3 475 aaPredicted RBP17.57■□□□□ 0.4
MACF1-223ENST00000496360 EXOC6BQ9Y2D4 811 aa17.57■□□□□ 0.4
MACF1-223ENST00000496360 MAP2P11137 1827 aaKnown RBP17.57■□□□□ 0.4
MACF1-223ENST00000496360 RUFY2Q8WXA3 655 aa17.56■□□□□ 0.4
MACF1-223ENST00000496360 NRDCO43847 1150 aa17.56■□□□□ 0.4
MACF1-223ENST00000496360 CCDC93Q567U6 631 aa17.56■□□□□ 0.4
MACF1-223ENST00000496360 CNTROBQ8N137 903 aa17.56■□□□□ 0.4
MACF1-223ENST00000496360 PDRG1Q9NUG6 133 aa17.56■□□□□ 0.4
MACF1-223ENST00000496360 FAM208AQ9UK61 1670 aaKnown RBP17.55■□□□□ 0.4
MACF1-223ENST00000496360 PEAK1Q9H792 1746 aa17.55■□□□□ 0.4
MACF1-223ENST00000496360 VPS37CA5D8V6 355 aaPredicted RBP17.55■□□□□ 0.4
MACF1-223ENST00000496360 EXOC5O00471 708 aa17.55■□□□□ 0.4
MACF1-223ENST00000496360 ZRANB2O95218 330 aaKnown RBP eCLIP17.55■□□□□ 0.4
MACF1-223ENST00000496360 CCZ1BP86790 482 aa17.55■□□□□ 0.4
MACF1-223ENST00000496360 CCZ1P86791 482 aaPredicted RBP17.55■□□□□ 0.4
MACF1-223ENST00000496360 TMCO3Q6UWJ1 677 aa17.55■□□□□ 0.4
MACF1-223ENST00000496360 CCDC83Q8IWF9 413 aa17.55■□□□□ 0.4
MACF1-223ENST00000496360 ZSWIM6Q9HCJ5 1215 aa17.55■□□□□ 0.4
MACF1-223ENST00000496360 CYP46A1Q9Y6A2 500 aa17.55■□□□□ 0.4
MACF1-223ENST00000496360 CCDC69A6NI79 296 aa17.54■□□□□ 0.4
MACF1-223ENST00000496360 TNNT3P45378 269 aaPredicted RBP17.54■□□□□ 0.4
MACF1-223ENST00000496360 EN1Q05925 392 aaPredicted RBP17.54■□□□□ 0.4
MACF1-223ENST00000496360 IQCB1Q15051 598 aa17.54■□□□□ 0.4
MACF1-223ENST00000496360 LARP1BQ659C4 914 aaKnown RBP17.54■□□□□ 0.4
MACF1-223ENST00000496360 PLCD3Q8N3E9 789 aa17.54■□□□□ 0.4
MACF1-223ENST00000496360 SPATA32Q96LK8 384 aa17.54■□□□□ 0.4
MACF1-223ENST00000496360 TNS2Q63HR2 1409 aa17.54■□□□□ 0.4
MACF1-223ENST00000496360 IL2RBP14784 551 aa17.54■□□□□ 0.4
MACF1-223ENST00000496360 CLCN6P51797 869 aa17.54■□□□□ 0.4
MACF1-223ENST00000496360 SNW1Q13573 536 aaKnown RBP17.54■□□□□ 0.4
MACF1-223ENST00000496360 STX1AQ16623 288 aa17.54■□□□□ 0.4
MACF1-223ENST00000496360 MARCH10Q8NA82 808 aaPredicted RBP17.54■□□□□ 0.4
MACF1-223ENST00000496360 UBXN6Q9BZV1 441 aa17.54■□□□□ 0.4
MACF1-223ENST00000496360 OSBPL5Q9H0X9 879 aaPredicted RBP17.54■□□□□ 0.4
MACF1-223ENST00000496360 PSD3Q9NYI0 1048 aa17.54■□□□□ 0.4
MACF1-223ENST00000496360 SLC4A2P04920 1241 aa17.53■□□□□ 0.4
MACF1-223ENST00000496360 CASTP20810 708 aaKnown RBP17.53■□□□□ 0.4
MACF1-223ENST00000496360 PLA2G4AP47712 749 aa17.53■□□□□ 0.4
MACF1-223ENST00000496360 CAMK4Q16566 473 aa17.53■□□□□ 0.4
MACF1-223ENST00000496360 CKAP2LQ8IYA6 745 aa17.53■□□□□ 0.4
MACF1-223ENST00000496360 CCDC150Q8NCX0 1101 aa17.53■□□□□ 0.4
MACF1-223ENST00000496360 PXDNLA1KZ92 1463 aa17.53■□□□□ 0.4
MACF1-223ENST00000496360 SOS1Q07889 1333 aaPredicted RBP17.53■□□□□ 0.4
MACF1-223ENST00000496360 APBA3O96018 575 aa17.52■□□□□ 0.4
MACF1-223ENST00000496360 ANKRD1Q15327 319 aa17.52■□□□□ 0.4
MACF1-223ENST00000496360 ALDH8A1Q9H2A2 487 aaPredicted RBP17.52■□□□□ 0.4
MACF1-223ENST00000496360 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.52■□□□□ 0.4
MACF1-223ENST00000496360 USP27XA6NNY8 438 aa17.52■□□□□ 0.39
MACF1-223ENST00000496360 TSHZ3Q63HK5 1081 aa17.52■□□□□ 0.39
MACF1-223ENST00000496360 DNAJC25Q9H1X3 360 aa17.52■□□□□ 0.39
MACF1-223ENST00000496360 GEMIN8Q9NWZ8 242 aaKnown RBP17.52■□□□□ 0.39
MACF1-223ENST00000496360 N4BP2Q86UW6 1770 aaPredicted RBP17.52■□□□□ 0.39
MACF1-223ENST00000496360 BCL9O00512 1426 aa17.52■□□□□ 0.39
MACF1-223ENST00000496360 FLT4P35916 1363 aa17.51■□□□□ 0.39
MACF1-223ENST00000496360 TPRNQ4KMQ1 711 aa17.51■□□□□ 0.39
MACF1-223ENST00000496360 RASEFQ8IZ41 740 aa17.51■□□□□ 0.39
MACF1-223ENST00000496360 LEO1Q8WVC0 666 aaPredicted RBP17.51■□□□□ 0.39
MACF1-223ENST00000496360 AK7Q96M32 723 aa17.51■□□□□ 0.39
MACF1-223ENST00000496360 PHLPP2Q6ZVD8 1323 aa17.51■□□□□ 0.39
MACF1-223ENST00000496360 USP42Q9H9J4 1324 aaKnown RBP17.51■□□□□ 0.39
MACF1-223ENST00000496360 IQUBQ8NA54 791 aa17.51■□□□□ 0.39
MACF1-223ENST00000496360 LARGE1O95461 756 aa17.5■□□□□ 0.39
MACF1-223ENST00000496360 GOLGA6L1Q8N7Z2 621 aa17.5■□□□□ 0.39
MACF1-223ENST00000496360 ST7Q9NRC1 585 aa17.5■□□□□ 0.39
MACF1-223ENST00000496360 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.5■□□□□ 0.39
MACF1-223ENST00000496360 PSMA5P28066 241 aa17.49■□□□□ 0.39
MACF1-223ENST00000496360 EZH2Q15910 746 aaKnown RBP17.49■□□□□ 0.39
MACF1-223ENST00000496360 ERCC6LQ2NKX8 1250 aa17.49■□□□□ 0.39
MACF1-223ENST00000496360 HSP90AB2PQ58FF8 381 aa17.49■□□□□ 0.39
MACF1-223ENST00000496360 TEX2Q8IWB9 1127 aa17.49■□□□□ 0.39
MACF1-223ENST00000496360 GOLGA5Q8TBA6 731 aa17.49■□□□□ 0.39
MACF1-223ENST00000496360 PI4K2BQ8TCG2 481 aa17.49■□□□□ 0.39
MACF1-223ENST00000496360 GTF3C6Q969F1 213 aa17.49■□□□□ 0.39
MACF1-223ENST00000496360 CAMKK2Q96RR4 588 aa17.49■□□□□ 0.39
MACF1-223ENST00000496360 IL25Q9H293 177 aa17.49■□□□□ 0.39
MACF1-223ENST00000496360 BRMS1Q9HCU9 246 aa17.49■□□□□ 0.39
MACF1-223ENST00000496360 EMILIN1Q9Y6C2 1016 aa17.49■□□□□ 0.39
MACF1-223ENST00000496360 SBF2Q86WG5 1849 aa17.49■□□□□ 0.39
MACF1-223ENST00000496360 MAP3K5Q99683 1374 aa17.49■□□□□ 0.39
MACF1-223ENST00000496360 ZKSCAN1P17029 563 aaPredicted RBP17.49■□□□□ 0.39
MACF1-223ENST00000496360 ARHGAP29Q52LW3 1261 aa17.49■□□□□ 0.39
MACF1-223ENST00000496360 CCDC158Q5M9N0 1113 aa17.49■□□□□ 0.39
MACF1-223ENST00000496360 UBXN4Q92575 508 aa17.49■□□□□ 0.39
MACF1-223ENST00000496360 ANO10Q9NW15 660 aa17.49■□□□□ 0.39
MACF1-223ENST00000496360 ORC3Q9UBD5 711 aaPredicted RBP17.49■□□□□ 0.39
MACF1-223ENST00000496360 RGPD2P0DJD1 1756 aa17.48■□□□□ 0.39
MACF1-223ENST00000496360 BECN2A8MW95 431 aa17.48■□□□□ 0.39
MACF1-223ENST00000496360 CASQ1P31415 396 aa17.48■□□□□ 0.39
MACF1-223ENST00000496360 NOM1Q5C9Z4 860 aaKnown RBP17.48■□□□□ 0.39
MACF1-223ENST00000496360 BICD2Q8TD16 824 aa17.48■□□□□ 0.39
MACF1-223ENST00000496360 SSH3Q8TE77 659 aa17.48■□□□□ 0.39
MACF1-223ENST00000496360 NAT10Q9H0A0 1025 aaKnown RBP17.48■□□□□ 0.39
MACF1-223ENST00000496360 TTC41PQ6P2S7 1318 aa17.48■□□□□ 0.39
MACF1-223ENST00000496360 SLC4A10Q6U841 1118 aa17.48■□□□□ 0.39
MACF1-223ENST00000496360 EXOC4Q96A65 974 aa17.48■□□□□ 0.39
MACF1-223ENST00000496360 JAKMIP1Q96N16 626 aaKnown RBP17.48■□□□□ 0.39
MACF1-223ENST00000496360 CFAP45Q9UL16 551 aa17.48■□□□□ 0.39
MACF1-223ENST00000496360 PNMA6EA0A0J9YXQ4 647 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms