RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 TMEM57Q8N5G2 664 aa15.02■□□□□ -0
APTX-233ENST00000496030 TTLL11Q8NHH1 800 aa15.02■□□□□ -0
APTX-233ENST00000496030 C7orf43Q8WVR3 580 aa15.02■□□□□ -0
APTX-233ENST00000496030 CRAMP1Q96RY5 1269 aa15.02■□□□□ -0
APTX-233ENST00000496030 C9orf78Q9NZ63 289 aaPredicted RBP15.02■□□□□ -0
APTX-233ENST00000496030 HACL1Q9UJ83 578 aa15.02■□□□□ -0
APTX-233ENST00000496030 ABT1Q9ULW3 272 aaKnown RBP15.02■□□□□ -0
APTX-233ENST00000496030 COL4A1P02462 1669 aa15.02□□□□□ -0.01
APTX-233ENST00000496030 CSF1RP07333 972 aa15.01□□□□□ -0.01
APTX-233ENST00000496030 DZIP1LQ8IYY4 767 aaKnown RBP15.01□□□□□ -0.01
APTX-233ENST00000496030 PANK1Q8TE04 598 aa15.01□□□□□ -0.01
APTX-233ENST00000496030 MYH3P11055 1940 aa15□□□□□ -0.01
APTX-233ENST00000496030 CTSWP56202 376 aa15□□□□□ -0.01
APTX-233ENST00000496030 CNKSR1Q969H4 720 aa15□□□□□ -0.01
APTX-233ENST00000496030 SUCLG2Q96I99 432 aa15□□□□□ -0.01
APTX-233ENST00000496030 CAPNS2Q96L46 248 aa15□□□□□ -0.01
APTX-233ENST00000496030 HSP90B1P14625 803 aaKnown RBP14.99□□□□□ -0.01
APTX-233ENST00000496030 GRM1Q13255 1194 aa14.99□□□□□ -0.01
APTX-233ENST00000496030 C20orf194Q5TEA3 1177 aa14.99□□□□□ -0.01
APTX-233ENST00000496030 CYP4F22Q6NT55 531 aa14.99□□□□□ -0.01
APTX-233ENST00000496030 OLFM4Q6UX06 510 aa14.99□□□□□ -0.01
APTX-233ENST00000496030 SLC51AQ86UW1 340 aa14.99□□□□□ -0.01
APTX-233ENST00000496030 RPGRQ92834 1020 aaKnown RBP14.99□□□□□ -0.01
APTX-233ENST00000496030 RBM17Q96I25 401 aaKnown RBP14.99□□□□□ -0.01
APTX-233ENST00000496030 MEIS3Q99687 375 aa14.99□□□□□ -0.01
APTX-233ENST00000496030 SEC31BQ9NQW1 1179 aa14.99□□□□□ -0.01
APTX-233ENST00000496030 ZNF277Q9NRM2 450 aaPredicted RBP14.99□□□□□ -0.01
APTX-233ENST00000496030 TRPM7Q96QT4 1865 aa14.99□□□□□ -0.01
APTX-233ENST00000496030 ALDH1B1P30837 517 aa14.98□□□□□ -0.01
APTX-233ENST00000496030 ANKRD44Q8N8A2 993 aa14.98□□□□□ -0.01
APTX-233ENST00000496030 CCDC85AQ96PX6 553 aaPredicted RBP14.98□□□□□ -0.01
APTX-233ENST00000496030 MCOLN1Q9GZU1 580 aa14.98□□□□□ -0.01
APTX-233ENST00000496030 GREM2Q9H772 168 aa14.98□□□□□ -0.01
APTX-233ENST00000496030 RTL9Q8NET4 1388 aa14.98□□□□□ -0.01
APTX-233ENST00000496030 ZBTB7BO15156 539 aaPredicted RBP14.97□□□□□ -0.01
APTX-233ENST00000496030 PDE3AQ14432 1141 aa14.97□□□□□ -0.01
APTX-233ENST00000496030 RABL6Q3YEC7 729 aaPredicted RBP14.97□□□□□ -0.01
APTX-233ENST00000496030 CCDC152Q4G0S7 254 aa14.97□□□□□ -0.01
APTX-233ENST00000496030 SOGA3Q5TF21 947 aa14.97□□□□□ -0.01
APTX-233ENST00000496030 LMBR1LQ6UX01 489 aa14.97□□□□□ -0.01
APTX-233ENST00000496030 PAXIP1Q6ZW49 1069 aaPredicted RBP14.97□□□□□ -0.01
APTX-233ENST00000496030 PNMA8AQ86V59 439 aaPredicted RBP14.97□□□□□ -0.01
APTX-233ENST00000496030 CELF1Q92879 486 aaKnown RBP14.97□□□□□ -0.01
APTX-233ENST00000496030 GPR101Q96P66 508 aaPredicted RBP14.97□□□□□ -0.01
APTX-233ENST00000496030 AOC2O75106 756 aa14.96□□□□□ -0.01
APTX-233ENST00000496030 FKBP4Q02790 459 aaKnown RBP eCLIP14.96□□□□□ -0.01
APTX-233ENST00000496030 GRAPQ13588 217 aa14.96□□□□□ -0.01
APTX-233ENST00000496030 CCDC93Q567U6 631 aa14.96□□□□□ -0.01
APTX-233ENST00000496030 DDX46Q7L014 1031 aaKnown RBP14.96□□□□□ -0.01
APTX-233ENST00000496030 FTSJ3Q8IY81 847 aaKnown RBP14.96□□□□□ -0.01
APTX-233ENST00000496030 GRAPLQ8TC17 118 aaPredicted RBP14.96□□□□□ -0.01
APTX-233ENST00000496030 BEGAINQ9BUH8 593 aa14.96□□□□□ -0.01
APTX-233ENST00000496030 BICC1Q9H694 974 aaKnown RBP14.96□□□□□ -0.01
APTX-233ENST00000496030 SNED1Q8TER0 1413 aa14.95□□□□□ -0.02
APTX-233ENST00000496030 BBOX1O75936 387 aa14.95□□□□□ -0.02
APTX-233ENST00000496030 UBTFL1P0CB47 393 aaPredicted RBP14.95□□□□□ -0.02
APTX-233ENST00000496030 MS4A1P11836 297 aa14.95□□□□□ -0.02
APTX-233ENST00000496030 RRP1P56182 461 aaKnown RBP14.95□□□□□ -0.02
APTX-233ENST00000496030 RPS8P62241 208 aaKnown RBP14.95□□□□□ -0.02
APTX-233ENST00000496030 CST9Q5W186 159 aa14.95□□□□□ -0.02
APTX-233ENST00000496030 COL4A5P29400 1685 aa14.95□□□□□ -0.02
APTX-233ENST00000496030 FZD9O00144 591 aa14.94□□□□□ -0.02
APTX-233ENST00000496030 TRAF5O00463 557 aa14.94□□□□□ -0.02
APTX-233ENST00000496030 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.94□□□□□ -0.02
APTX-233ENST00000496030 ATP6V0A2Q9Y487 856 aa14.94□□□□□ -0.02
APTX-233ENST00000496030 LRRFIP2Q9Y608 721 aaKnown RBP14.94□□□□□ -0.02
APTX-233ENST00000496030 PPEF1O14829 653 aaPredicted RBP14.93□□□□□ -0.02
APTX-233ENST00000496030 GNAI3P08754 354 aa14.93□□□□□ -0.02
APTX-233ENST00000496030 ITGA6P23229 1130 aa14.93□□□□□ -0.02
APTX-233ENST00000496030 ECE1P42892 770 aa14.93□□□□□ -0.02
APTX-233ENST00000496030 MVPQ14764 893 aaKnown RBP14.93□□□□□ -0.02
APTX-233ENST00000496030 ITPRIPQ8IWB1 547 aa14.93□□□□□ -0.02
APTX-233ENST00000496030 SP8Q8IXZ3 490 aa14.93□□□□□ -0.02
APTX-233ENST00000496030 COG6Q9Y2V7 657 aa14.93□□□□□ -0.02
APTX-233ENST00000496030 GPC2Q8N158 579 aa14.92□□□□□ -0.02
APTX-233ENST00000496030 IARSP41252 1262 aaKnown RBP14.91□□□□□ -0.02
APTX-233ENST00000496030 RFX5P48382 616 aaPredicted RBP14.91□□□□□ -0.02
APTX-233ENST00000496030 DGKZQ13574 1117 aa14.91□□□□□ -0.02
APTX-233ENST00000496030 TLL2Q9Y6L7 1015 aa14.91□□□□□ -0.02
APTX-233ENST00000496030 LRRC37AA6NMS7 1700 aa14.91□□□□□ -0.02
APTX-233ENST00000496030 GNAI2P04899 355 aa14.9□□□□□ -0.02
APTX-233ENST00000496030 EPS15P42566 896 aa14.9□□□□□ -0.02
APTX-233ENST00000496030 IFIT5Q13325 482 aaKnown RBP14.9□□□□□ -0.02
APTX-233ENST00000496030 MTX1Q13505 466 aa14.9□□□□□ -0.02
APTX-233ENST00000496030 CC2D2BQ6DHV5 1058 aa14.9□□□□□ -0.02
APTX-233ENST00000496030 TMC4Q7Z404 712 aa14.9□□□□□ -0.02
APTX-233ENST00000496030 ANKRD18AQ8IVF6 992 aa14.9□□□□□ -0.02
APTX-233ENST00000496030 ZNF594Q96JF6 807 aaPredicted RBP14.9□□□□□ -0.02
APTX-233ENST00000496030 CDC5LQ99459 802 aaKnown RBP14.9□□□□□ -0.02
APTX-233ENST00000496030 ZBTB40Q9NUA8 1239 aa14.9□□□□□ -0.02
APTX-233ENST00000496030 BSDC1Q9NW68 430 aaPredicted RBP14.9□□□□□ -0.02
APTX-233ENST00000496030 SUPT16HQ9Y5B9 1047 aaKnown RBP14.9□□□□□ -0.02
APTX-233ENST00000496030 GJA3Q9Y6H8 435 aa14.9□□□□□ -0.02
APTX-233ENST00000496030 ANKRD18BA2A2Z9 1011 aa14.89□□□□□ -0.03
APTX-233ENST00000496030 MAP2K2P36507 400 aa14.89□□□□□ -0.03
APTX-233ENST00000496030 SCNN1DP51172 638 aa14.89□□□□□ -0.03
APTX-233ENST00000496030 DDX19BQ9UMR2 479 aa14.89□□□□□ -0.03
APTX-233ENST00000496030 HDAC5Q9UQL6 1122 aa14.89□□□□□ -0.03
APTX-233ENST00000496030 CHMP3Q9Y3E7 222 aa14.89□□□□□ -0.03
APTX-233ENST00000496030 SPEF2Q9C093 1822 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms