RNA–Protein interactions for RNA: ENST00000495893.6

PHC3-215, Transcript of polyhomeotic homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHC3, Length 12,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-215ENST00000495893 BCL2L13Q9BXK5 485 aa4.34□□□□□ -1.71
PHC3-215ENST00000495893 BMP2KQ9NSY1 1161 aaPredicted RBP4.34□□□□□ -1.71
PHC3-215ENST00000495893 CYP46A1Q9Y6A2 500 aa4.34□□□□□ -1.71
PHC3-215ENST00000495893 PIK3C2GO75747 1445 aa4.34□□□□□ -1.71
PHC3-215ENST00000495893 CNGA1P29973 690 aa4.34□□□□□ -1.71
PHC3-215ENST00000495893 PRPHP41219 470 aa4.34□□□□□ -1.71
PHC3-215ENST00000495893 CEBPZQ03701 1054 aaKnown RBP4.34□□□□□ -1.71
PHC3-215ENST00000495893 DYNC1I2Q13409 638 aaKnown RBP4.34□□□□□ -1.71
PHC3-215ENST00000495893 HVCN1Q96D96 273 aa4.34□□□□□ -1.71
PHC3-215ENST00000495893 PPP1R12CQ9BZL4 782 aa4.34□□□□□ -1.71
PHC3-215ENST00000495893 NCKAP5LQ9HCH0 1330 aa4.34□□□□□ -1.71
PHC3-215ENST00000495893 SESN3P58005 492 aa4.34□□□□□ -1.71
PHC3-215ENST00000495893 HMGB3O15347 200 aaKnown RBP4.34□□□□□ -1.71
PHC3-215ENST00000495893 PLIN1O60240 522 aa4.34□□□□□ -1.71
PHC3-215ENST00000495893 CCDC57Q2TAC2 916 aa4.34□□□□□ -1.71
PHC3-215ENST00000495893 IQCGQ9H095 443 aaKnown RBP4.34□□□□□ -1.71
PHC3-215ENST00000495893 DDX19AQ9NUU7 478 aaKnown RBP4.34□□□□□ -1.71
PHC3-215ENST00000495893 KRT18P05783 430 aaKnown RBP4.34□□□□□ -1.71
PHC3-215ENST00000495893 SAFB2Q14151 953 aaKnown RBP eCLIP4.34□□□□□ -1.71
PHC3-215ENST00000495893 SMC1BQ8NDV3 1235 aa4.34□□□□□ -1.71
PHC3-215ENST00000495893 TPX2Q9ULW0 747 aaKnown RBP4.34□□□□□ -1.71
PHC3-215ENST00000495893 DNMT1P26358 1616 aaKnown RBP4.34□□□□□ -1.71
PHC3-215ENST00000495893 SNCBQ16143 134 aa4.34□□□□□ -1.71
PHC3-215ENST00000495893 PUS7Q96PZ0 661 aaKnown RBP4.34□□□□□ -1.71
PHC3-215ENST00000495893 SPG7Q9UQ90 795 aa4.34□□□□□ -1.71
PHC3-215ENST00000495893 AMOTL2Q9Y2J4 779 aa4.34□□□□□ -1.71
PHC3-215ENST00000495893 PRC1O43663 620 aa4.34□□□□□ -1.71
PHC3-215ENST00000495893 SMIM24O75264 130 aa4.34□□□□□ -1.71
PHC3-215ENST00000495893 GFAPP14136 432 aa4.34□□□□□ -1.71
PHC3-215ENST00000495893 BLVRAP53004 296 aa4.34□□□□□ -1.71
PHC3-215ENST00000495893 LARP1BQ659C4 914 aaKnown RBP4.34□□□□□ -1.71
PHC3-215ENST00000495893 PHLDB3Q6NSJ2 640 aa4.34□□□□□ -1.71
PHC3-215ENST00000495893 LRRC43Q8N309 656 aa4.34□□□□□ -1.71
PHC3-215ENST00000495893 KAT6BQ8WYB5 2073 aa4.34□□□□□ -1.71
PHC3-215ENST00000495893 TRIM22Q8IYM9 498 aa4.34□□□□□ -1.72
PHC3-215ENST00000495893 CCDC68Q9H2F9 335 aa4.34□□□□□ -1.72
PHC3-215ENST00000495893 FOSBP53539 338 aa4.34□□□□□ -1.72
PHC3-215ENST00000495893 GNG11P61952 73 aa4.34□□□□□ -1.72
PHC3-215ENST00000495893 IRX1P78414 480 aaPredicted RBP4.34□□□□□ -1.72
PHC3-215ENST00000495893 GOLGA5Q8TBA6 731 aa4.34□□□□□ -1.72
PHC3-215ENST00000495893 WASF1Q92558 559 aa4.34□□□□□ -1.72
PHC3-215ENST00000495893 COG7P83436 770 aa4.34□□□□□ -1.72
PHC3-215ENST00000495893 PPFIA1Q13136 1202 aa4.34□□□□□ -1.72
PHC3-215ENST00000495893 TBC1D31Q96DN5 1066 aa4.34□□□□□ -1.72
PHC3-215ENST00000495893 PYM1Q9BRP8 204 aaKnown RBP4.34□□□□□ -1.72
PHC3-215ENST00000495893 SRCIN1Q9C0H9 1055 aa4.34□□□□□ -1.72
PHC3-215ENST00000495893 SLAIN2Q9P270 581 aa4.34□□□□□ -1.72
PHC3-215ENST00000495893 BICDL2A1A5D9 508 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 PDE3AQ14432 1141 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 KLHDC4Q8TBB5 520 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 PPP1R9BQ96SB3 815 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 TTC12Q9H892 705 aaPredicted RBP4.33□□□□□ -1.72
PHC3-215ENST00000495893 SLC3A2P08195 630 aaKnown RBP4.33□□□□□ -1.72
PHC3-215ENST00000495893 PPP2R5AQ15172 486 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 PDCD2Q16342 344 aaPredicted RBP4.33□□□□□ -1.72
PHC3-215ENST00000495893 SPTY2D1Q68D10 685 aaPredicted RBP4.33□□□□□ -1.72
PHC3-215ENST00000495893 FLAD1Q8NFF5 587 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 CCDC12Q8WUD4 166 aaPredicted RBP4.33□□□□□ -1.72
PHC3-215ENST00000495893 ATP2A3Q93084 1043 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 C8orf37Q96NL8 207 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 TSG101Q99816 390 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 ADGRL2O95490 1459 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 SERPINI2O75830 405 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 KLHL34Q8N239 644 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 MYRIPQ8NFW9 859 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 MORC4Q8TE76 937 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 LNPKQ9C0E8 428 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 PHAXQ9H814 394 aaKnown RBP4.33□□□□□ -1.72
PHC3-215ENST00000495893 TRMT1Q9NXH9 659 aaKnown RBP4.33□□□□□ -1.72
PHC3-215ENST00000495893 NAA16Q6N069 864 aaPredicted RBP4.33□□□□□ -1.72
PHC3-215ENST00000495893 MPNDQ8N594 471 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 NUP88Q99567 741 aaPredicted RBP4.33□□□□□ -1.72
PHC3-215ENST00000495893 SH3GL3Q99963 347 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 KRT32Q14532 448 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 FYB2Q5VWT5 728 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 RAB11FIP4Q86YS3 637 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 EFCAB13Q8IY85 973 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.33□□□□□ -1.72
PHC3-215ENST00000495893 MADDQ8WXG6 1647 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 NDUFAB1O14561 156 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 ZSCAN26Q16670 478 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 TRIM60Q495X7 471 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 ERVK-7P63135 1459 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 MUM1Q2TAK8 710 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 KLHL40Q2TBA0 621 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 CCDC62Q6P9F0 684 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 FERMT1Q9BQL6 677 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 GTF2E1P29083 439 aaPredicted RBP4.33□□□□□ -1.72
PHC3-215ENST00000495893 PCYT1AP49585 367 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 LRSAM1Q6UWE0 723 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 TOM1L2Q6ZVM7 507 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 BICD1Q96G01 975 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 XAB2Q9HCS7 855 aaKnown RBP4.33□□□□□ -1.72
PHC3-215ENST00000495893 PALMDQ9NP74 551 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 TMEM94Q12767 1356 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 RBM6P78332 1123 aaKnown RBP4.33□□□□□ -1.72
PHC3-215ENST00000495893 CALCOCO2Q13137 446 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 CCDC170Q8IYT3 715 aa4.33□□□□□ -1.72
PHC3-215ENST00000495893 C9orf78Q9NZ63 289 aaPredicted RBP4.33□□□□□ -1.72
PHC3-215ENST00000495893 MKL2Q9ULH7 1088 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms