RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 SCN9AQ15858 1988 aa12.23□□□□□ -0.45
GARNL3-219ENST00000495172 ABCC4O15439 1325 aa12.22□□□□□ -0.45
GARNL3-219ENST00000495172 KIF7Q2M1P5 1343 aa12.22□□□□□ -0.45
GARNL3-219ENST00000495172 PLA2G5P39877 138 aa12.22□□□□□ -0.45
GARNL3-219ENST00000495172 SREBF2Q12772 1141 aa12.22□□□□□ -0.45
GARNL3-219ENST00000495172 DOK7Q18PE1 504 aa12.22□□□□□ -0.45
GARNL3-219ENST00000495172 SIPA1L3O60292 1781 aaPredicted RBP12.22□□□□□ -0.45
GARNL3-219ENST00000495172 UBN2Q6ZU65 1347 aa12.21□□□□□ -0.45
GARNL3-219ENST00000495172 CRHR2Q13324 411 aa12.21□□□□□ -0.45
GARNL3-219ENST00000495172 MTFR1Q15390 333 aa12.21□□□□□ -0.45
GARNL3-219ENST00000495172 GRIPAP1Q4V328 841 aa12.21□□□□□ -0.45
GARNL3-219ENST00000495172 IFNL1Q8IU54 200 aa12.21□□□□□ -0.45
GARNL3-219ENST00000495172 NGEFQ8N5V2 710 aa12.21□□□□□ -0.45
GARNL3-219ENST00000495172 ERO1AQ96HE7 468 aa12.21□□□□□ -0.45
GARNL3-219ENST00000495172 TEX13AQ9BXU3 409 aaPredicted RBP12.21□□□□□ -0.45
GARNL3-219ENST00000495172 NUP98P52948 1817 aa12.21□□□□□ -0.46
GARNL3-219ENST00000495172 SUSD4Q5VX71 490 aa12.2□□□□□ -0.46
GARNL3-219ENST00000495172 SPRYD7Q5W111 196 aa12.2□□□□□ -0.46
GARNL3-219ENST00000495172 SUPT20HQ8NEM7 779 aa12.2□□□□□ -0.46
GARNL3-219ENST00000495172 FMNL2Q96PY5 1086 aa12.2□□□□□ -0.46
GARNL3-219ENST00000495172 IL13P35225 146 aa12.19□□□□□ -0.46
GARNL3-219ENST00000495172 FKBP1BP68106 108 aa12.19□□□□□ -0.46
GARNL3-219ENST00000495172 IL17REQ8NFR9 667 aa12.19□□□□□ -0.46
GARNL3-219ENST00000495172 FAM161BQ96MY7 647 aa12.19□□□□□ -0.46
GARNL3-219ENST00000495172 VPS33BQ9H267 617 aa12.19□□□□□ -0.46
GARNL3-219ENST00000495172 LAMB2P55268 1798 aa12.18□□□□□ -0.46
GARNL3-219ENST00000495172 FAM122AQ96E09 287 aa12.18□□□□□ -0.46
GARNL3-219ENST00000495172 ALPK3Q96L96 1907 aa12.17□□□□□ -0.46
GARNL3-219ENST00000495172 CDH23Q9H251 3354 aa12.17□□□□□ -0.46
GARNL3-219ENST00000495172 COL4A1P02462 1669 aa12.17□□□□□ -0.46
GARNL3-219ENST00000495172 ECE2O60344 883 aa12.17□□□□□ -0.46
GARNL3-219ENST00000495172 BCAMP50895 628 aa12.17□□□□□ -0.46
GARNL3-219ENST00000495172 SP3Q02447 781 aa12.17□□□□□ -0.46
GARNL3-219ENST00000495172 UBE2Q1Q7Z7E8 422 aa12.17□□□□□ -0.46
GARNL3-219ENST00000495172 ZNF428Q96B54 188 aa12.17□□□□□ -0.46
GARNL3-219ENST00000495172 ARHGAP39Q9C0H5 1083 aa12.17□□□□□ -0.46
GARNL3-219ENST00000495172 TMX4Q9H1E5 349 aaPredicted RBP12.17□□□□□ -0.46
GARNL3-219ENST00000495172 NTSR2O95665 410 aa12.16□□□□□ -0.46
GARNL3-219ENST00000495172 NBPF11Q86T75 865 aa12.16□□□□□ -0.46
GARNL3-219ENST00000495172 CLMNQ96JQ2 1002 aa12.16□□□□□ -0.46
GARNL3-219ENST00000495172 GUCD1Q96NT3 240 aa12.16□□□□□ -0.46
GARNL3-219ENST00000495172 NYXQ9GZU5 481 aa12.16□□□□□ -0.46
GARNL3-219ENST00000495172 SPINK5Q9NQ38 1064 aaPredicted RBP12.16□□□□□ -0.46
GARNL3-219ENST00000495172 A0A1W2PPC1 479 aa12.15□□□□□ -0.46
GARNL3-219ENST00000495172 ALDH1A1P00352 501 aa12.15□□□□□ -0.46
GARNL3-219ENST00000495172 TEFQ10587 303 aa12.15□□□□□ -0.46
GARNL3-219ENST00000495172 TTLL7Q6ZT98 887 aa12.15□□□□□ -0.46
GARNL3-219ENST00000495172 ANKRD13DQ6ZTN6 518 aa12.15□□□□□ -0.46
GARNL3-219ENST00000495172 SP8Q8IXZ3 490 aa12.15□□□□□ -0.46
GARNL3-219ENST00000495172 PTPN18Q99952 460 aa12.15□□□□□ -0.46
GARNL3-219ENST00000495172 NR2E3Q9Y5X4 410 aa12.15□□□□□ -0.46
GARNL3-219ENST00000495172 RPTORQ8N122 1335 aa12.14□□□□□ -0.47
GARNL3-219ENST00000495172 RPS12P25398 132 aaKnown RBP12.14□□□□□ -0.47
GARNL3-219ENST00000495172 TCIRG1Q13488 830 aa12.14□□□□□ -0.47
GARNL3-219ENST00000495172 WASHC4Q2M389 1173 aa12.14□□□□□ -0.47
GARNL3-219ENST00000495172 NBPF9Q3BBW0 867 aa12.14□□□□□ -0.47
GARNL3-219ENST00000495172 TMEM265A0A087WTH1 108 aa12.13□□□□□ -0.47
GARNL3-219ENST00000495172 GJA5P36382 358 aa12.13□□□□□ -0.47
GARNL3-219ENST00000495172 ZBTB3Q9H5J0 574 aa12.13□□□□□ -0.47
GARNL3-219ENST00000495172 POLLQ9UGP5 575 aa12.13□□□□□ -0.47
GARNL3-219ENST00000495172 ZMYND8Q9ULU4 1186 aaPredicted RBP12.13□□□□□ -0.47
GARNL3-219ENST00000495172 ANGEL1Q9UNK9 670 aaKnown RBP12.13□□□□□ -0.47
GARNL3-219ENST00000495172 ZNF280AP59817 542 aaPredicted RBP12.12□□□□□ -0.47
GARNL3-219ENST00000495172 HTATIP2Q9BUP3 242 aa12.12□□□□□ -0.47
GARNL3-219ENST00000495172 IRS2Q9Y4H2 1338 aa12.11□□□□□ -0.47
GARNL3-219ENST00000495172 MANSC4A6NHS7 340 aaPredicted RBP12.11□□□□□ -0.47
GARNL3-219ENST00000495172 BTBD11A6QL63 1104 aa12.11□□□□□ -0.47
GARNL3-219ENST00000495172 C6orf229H3BNL8 230 aa12.11□□□□□ -0.47
GARNL3-219ENST00000495172 EVI5O60447 810 aa12.11□□□□□ -0.47
GARNL3-219ENST00000495172 VIL1P09327 827 aaKnown RBP12.11□□□□□ -0.47
GARNL3-219ENST00000495172 HCLS1P14317 486 aaPredicted RBP12.11□□□□□ -0.47
GARNL3-219ENST00000495172 LDLRAD1Q5T700 205 aa12.11□□□□□ -0.47
GARNL3-219ENST00000495172 WNK4Q96J92 1243 aa12.11□□□□□ -0.47
GARNL3-219ENST00000495172 NLRP3Q96P20 1036 aa12.11□□□□□ -0.47
GARNL3-219ENST00000495172 GDF15Q99988 308 aa12.11□□□□□ -0.47
GARNL3-219ENST00000495172 MYOZ2Q9NPC6 264 aa12.11□□□□□ -0.47
GARNL3-219ENST00000495172 LRRC37AA6NMS7 1700 aa12.11□□□□□ -0.47
GARNL3-219ENST00000495172 CACNA1AO00555 2505 aa12.1□□□□□ -0.47
GARNL3-219ENST00000495172 RGL2O15211 777 aa12.1□□□□□ -0.47
GARNL3-219ENST00000495172 GPSM2P81274 684 aa12.1□□□□□ -0.47
GARNL3-219ENST00000495172 GPR153Q6NV75 609 aa12.1□□□□□ -0.47
GARNL3-219ENST00000495172 POLR3GLQ9BT43 218 aa12.1□□□□□ -0.47
GARNL3-219ENST00000495172 MXD3Q9BW11 206 aa12.1□□□□□ -0.47
GARNL3-219ENST00000495172 NSFL1CQ9UNZ2 370 aaKnown RBP12.1□□□□□ -0.47
GARNL3-219ENST00000495172 ZNF646O15015 1829 aaPredicted RBP12.09□□□□□ -0.47
GARNL3-219ENST00000495172 DDX60Q8IY21 1712 aaKnown RBP12.09□□□□□ -0.47
GARNL3-219ENST00000495172 BBOX1O75936 387 aa12.09□□□□□ -0.47
GARNL3-219ENST00000495172 FARP2O94887 1054 aaPredicted RBP12.09□□□□□ -0.47
GARNL3-219ENST00000495172 SYN1P17600 705 aa12.09□□□□□ -0.47
GARNL3-219ENST00000495172 SLC10A4Q96EP9 437 aa12.09□□□□□ -0.47
GARNL3-219ENST00000495172 LAMB1P07942 1786 aa12.09□□□□□ -0.47
GARNL3-219ENST00000495172 SASH1O94885 1247 aa12.08□□□□□ -0.48
GARNL3-219ENST00000495172 ARMC9Q7Z3E5 817 aa12.08□□□□□ -0.48
GARNL3-219ENST00000495172 ZNF34Q8IZ26 560 aa12.08□□□□□ -0.48
GARNL3-219ENST00000495172 MAP3K15Q6ZN16 1313 aa12.08□□□□□ -0.48
GARNL3-219ENST00000495172 ANKRD36CQ5JPF3 1778 aa12.07□□□□□ -0.48
GARNL3-219ENST00000495172 SSC5DA1L4H1 1573 aa12.07□□□□□ -0.48
GARNL3-219ENST00000495172 SNRPA1P09661 255 aaKnown RBP12.07□□□□□ -0.48
GARNL3-219ENST00000495172 CCL5P13501 91 aa12.07□□□□□ -0.48
GARNL3-219ENST00000495172 CTGFP29279 349 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms