RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 SAPCD2Q86UD0 394 aa29.95■■■□□ 2.39
COL27A1-208ENST00000494780 GPR101Q96P66 508 aaPredicted RBP29.95■■■□□ 2.39
COL27A1-208ENST00000494780 ZC3H12CQ9C0D7 883 aaKnown RBP29.94■■■□□ 2.38
COL27A1-208ENST00000494780 GRM1Q13255 1194 aa29.93■■■□□ 2.38
COL27A1-208ENST00000494780 DOK7Q18PE1 504 aa29.93■■■□□ 2.38
COL27A1-208ENST00000494780 TSPYL6Q8N831 410 aa29.93■■■□□ 2.38
COL27A1-208ENST00000494780 HHIPL1Q96JK4 782 aa29.93■■■□□ 2.38
COL27A1-208ENST00000494780 CCDC27Q2M243 656 aa29.92■■■□□ 2.38
COL27A1-208ENST00000494780 ANKIB1Q9P2G1 1089 aa29.92■■■□□ 2.38
COL27A1-208ENST00000494780 MAP3K2Q9Y2U5 619 aa29.92■■■□□ 2.38
COL27A1-208ENST00000494780 RTL9Q8NET4 1388 aa29.91■■■□□ 2.38
COL27A1-208ENST00000494780 MAP2K2P36507 400 aa29.91■■■□□ 2.38
COL27A1-208ENST00000494780 KSR2Q6VAB6 950 aa29.91■■■□□ 2.38
COL27A1-208ENST00000494780 SAMD7Q7Z3H4 446 aa29.91■■■□□ 2.38
COL27A1-208ENST00000494780 BEGAINQ9BUH8 593 aa29.91■■■□□ 2.38
COL27A1-208ENST00000494780 KCNQ5Q9NR82 932 aa29.91■■■□□ 2.38
COL27A1-208ENST00000494780 UFL1O94874 794 aa29.9■■■□□ 2.38
COL27A1-208ENST00000494780 JARID2Q92833 1246 aaPredicted RBP29.9■■■□□ 2.38
COL27A1-208ENST00000494780 GGA1Q9UJY5 639 aa29.9■■■□□ 2.38
COL27A1-208ENST00000494780 CCDC184Q52MB2 194 aa29.89■■■□□ 2.38
COL27A1-208ENST00000494780 TSR2Q969E8 191 aaKnown RBP29.89■■■□□ 2.38
COL27A1-208ENST00000494780 STK31Q9BXU1 1019 aa29.89■■■□□ 2.38
COL27A1-208ENST00000494780 ZNF408Q9H9D4 720 aa29.89■■■□□ 2.38
COL27A1-208ENST00000494780 PI4KAP2A4QPH2 592 aa29.88■■■□□ 2.37
COL27A1-208ENST00000494780 G3V3G9 751 aa29.88■■■□□ 2.37
COL27A1-208ENST00000494780 TBC1D10BQ4KMP7 808 aaPredicted RBP29.88■■■□□ 2.37
COL27A1-208ENST00000494780 DCAF8Q5TAQ9 597 aa29.88■■■□□ 2.37
COL27A1-208ENST00000494780 USP48Q86UV5 1035 aa29.88■■■□□ 2.37
COL27A1-208ENST00000494780 ANKRD18AQ8IVF6 992 aa29.88■■■□□ 2.37
COL27A1-208ENST00000494780 PI4KAP1Q8N8J0 262 aa29.88■■■□□ 2.37
COL27A1-208ENST00000494780 CCDC85AQ96PX6 553 aaPredicted RBP29.88■■■□□ 2.37
COL27A1-208ENST00000494780 VIL1P09327 827 aaKnown RBP29.87■■■□□ 2.37
COL27A1-208ENST00000494780 WWC1Q8IX03 1113 aa29.87■■■□□ 2.37
COL27A1-208ENST00000494780 AOC2O75106 756 aa29.86■■■□□ 2.37
COL27A1-208ENST00000494780 IGKV5-2P06315 115 aa29.86■■■□□ 2.37
COL27A1-208ENST00000494780 NEXNQ0ZGT2 675 aa29.86■■■□□ 2.37
COL27A1-208ENST00000494780 XDHP47989 1333 aa29.85■■■□□ 2.37
COL27A1-208ENST00000494780 EGFRP00533 1210 aa29.84■■■□□ 2.37
COL27A1-208ENST00000494780 CTSWP56202 376 aa29.84■■■□□ 2.37
COL27A1-208ENST00000494780 TWISTNBQ3B726 338 aaPredicted RBP29.84■■■□□ 2.37
COL27A1-208ENST00000494780 NCBP3Q53F19 620 aaKnown RBP29.84■■■□□ 2.37
COL27A1-208ENST00000494780 KRT26Q7Z3Y9 468 aa29.84■■■□□ 2.37
COL27A1-208ENST00000494780 CDC5LQ99459 802 aaKnown RBP29.84■■■□□ 2.37
COL27A1-208ENST00000494780 IL16Q14005 1332 aa29.84■■■□□ 2.37
COL27A1-208ENST00000494780 SCN9AQ15858 1988 aa29.83■■■□□ 2.37
COL27A1-208ENST00000494780 RBM26Q5T8P6 1007 aaKnown RBP29.83■■■□□ 2.37
COL27A1-208ENST00000494780 DCPSQ96C86 337 aaKnown RBP29.83■■■□□ 2.37
COL27A1-208ENST00000494780 ZNF609O15014 1411 aa29.82■■■□□ 2.36
COL27A1-208ENST00000494780 ATP2B4P23634 1241 aa29.82■■■□□ 2.36
COL27A1-208ENST00000494780 KIF4BQ2VIQ3 1234 aa29.82■■■□□ 2.36
COL27A1-208ENST00000494780 TTLL11Q8NHH1 800 aa29.81■■■□□ 2.36
COL27A1-208ENST00000494780 NEURL1BA8MQ27 555 aa29.8■■■□□ 2.36
COL27A1-208ENST00000494780 SLC4A2P04920 1241 aa29.8■■■□□ 2.36
COL27A1-208ENST00000494780 BRPF1P55201 1214 aaPredicted RBP29.8■■■□□ 2.36
COL27A1-208ENST00000494780 AGBL3Q8NEM8 1001 aa29.8■■■□□ 2.36
COL27A1-208ENST00000494780 CA12O43570 354 aa29.79■■■□□ 2.36
COL27A1-208ENST00000494780 HUNKP57058 714 aa29.79■■■□□ 2.36
COL27A1-208ENST00000494780 CWF19L2Q2TBE0 894 aaKnown RBP29.79■■■□□ 2.36
COL27A1-208ENST00000494780 RSBN1LQ6PCB5 846 aaPredicted RBP29.79■■■□□ 2.36
COL27A1-208ENST00000494780 DLK2Q6UY11 383 aa29.79■■■□□ 2.36
COL27A1-208ENST00000494780 G2E3Q7L622 706 aa29.79■■■□□ 2.36
COL27A1-208ENST00000494780 BSDC1Q9NW68 430 aaPredicted RBP29.79■■■□□ 2.36
COL27A1-208ENST00000494780 ADM5C9JUS6 153 aa29.77■■■□□ 2.36
COL27A1-208ENST00000494780 H7C1W4 665 aa29.77■■■□□ 2.36
COL27A1-208ENST00000494780 ZNF280AP59817 542 aaPredicted RBP29.77■■■□□ 2.36
COL27A1-208ENST00000494780 NOGQ13253 232 aa29.77■■■□□ 2.36
COL27A1-208ENST00000494780 PODNQ7Z5L7 613 aa29.77■■■□□ 2.36
COL27A1-208ENST00000494780 GREM2Q9H772 168 aa29.77■■■□□ 2.36
COL27A1-208ENST00000494780 GBA2Q9HCG7 927 aaPredicted RBP29.77■■■□□ 2.36
COL27A1-208ENST00000494780 MINPP1Q9UNW1 487 aa29.77■■■□□ 2.36
COL27A1-208ENST00000494780 MYH3P11055 1940 aa29.77■■■□□ 2.36
COL27A1-208ENST00000494780 PSME4Q14997 1843 aa29.76■■■□□ 2.35
COL27A1-208ENST00000494780 POLR2AP24928 1970 aaKnown RBP29.76■■■□□ 2.35
COL27A1-208ENST00000494780 SULF1Q8IWU6 871 aa29.76■■■□□ 2.35
COL27A1-208ENST00000494780 C2orf69Q8N8R5 385 aa29.76■■■□□ 2.35
COL27A1-208ENST00000494780 GGA3Q9NZ52 723 aa29.76■■■□□ 2.35
COL27A1-208ENST00000494780 UBE3BQ7Z3V4 1068 aa29.75■■■□□ 2.35
COL27A1-208ENST00000494780 MRS2Q9HD23 443 aa29.75■■■□□ 2.35
COL27A1-208ENST00000494780 USP17L3A6NCW0 530 aa29.74■■■□□ 2.35
COL27A1-208ENST00000494780 USP17L4A6NCW7 530 aa29.74■■■□□ 2.35
COL27A1-208ENST00000494780 FLIIQ13045 1269 aa29.74■■■□□ 2.35
COL27A1-208ENST00000494780 USP17L1Q7RTZ2 530 aa29.74■■■□□ 2.35
COL27A1-208ENST00000494780 ABHD8Q96I13 439 aa29.74■■■□□ 2.35
COL27A1-208ENST00000494780 GMLQ99445 158 aa29.74■■■□□ 2.35
COL27A1-208ENST00000494780 MED23Q9ULK4 1368 aa29.74■■■□□ 2.35
COL27A1-208ENST00000494780 RGMBQ6NW40 437 aa29.73■■■□□ 2.35
COL27A1-208ENST00000494780 PLA2G12BQ9BX93 195 aa29.73■■■□□ 2.35
COL27A1-208ENST00000494780 TSKSQ9UJT2 592 aa29.73■■■□□ 2.35
COL27A1-208ENST00000494780 FANCIQ9NVI1 1328 aa29.72■■■□□ 2.35
COL27A1-208ENST00000494780 USP17L8P0C7I0 530 aa29.72■■■□□ 2.35
COL27A1-208ENST00000494780 GCKRQ14397 625 aa29.72■■■□□ 2.35
COL27A1-208ENST00000494780 IGHMBP2P38935 993 aaKnown RBP29.71■■■□□ 2.35
COL27A1-208ENST00000494780 CCT4P50991 539 aaKnown RBP29.71■■■□□ 2.35
COL27A1-208ENST00000494780 SCARF1Q14162 830 aa29.71■■■□□ 2.35
COL27A1-208ENST00000494780 MYH16Q9H6N6 1097 aa29.71■■■□□ 2.35
COL27A1-208ENST00000494780 ASTN2O75129 1339 aaPredicted RBP29.71■■■□□ 2.35
COL27A1-208ENST00000494780 WTIPA6NIX2 430 aaPredicted RBP29.7■■■□□ 2.35
COL27A1-208ENST00000494780 FKBP5Q13451 457 aaPredicted RBP29.7■■■□□ 2.35
COL27A1-208ENST00000494780 WDR63Q8IWG1 891 aa29.7■■■□□ 2.35
COL27A1-208ENST00000494780 DNAAF4Q8WXU2 420 aa29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms