RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 SETDB2Q96T68 719 aa9.98□□□□□ -0.81
RBM39-238ENST00000493853 PNNQ9H307 717 aaKnown RBP9.98□□□□□ -0.81
RBM39-238ENST00000493853 FAM217BQ9NTX9 383 aaPredicted RBP9.98□□□□□ -0.81
RBM39-238ENST00000493853 RNF181Q9P0P0 153 aa9.98□□□□□ -0.81
RBM39-238ENST00000493853 ADCY9O60503 1353 aa9.98□□□□□ -0.81
RBM39-238ENST00000493853 COL3A1P02461 1466 aaPredicted RBP9.98□□□□□ -0.81
RBM39-238ENST00000493853 MRC1P22897 1456 aa9.98□□□□□ -0.81
RBM39-238ENST00000493853 KCNQ3O43525 872 aa9.97□□□□□ -0.81
RBM39-238ENST00000493853 FMNL1O95466 1100 aaPredicted RBP9.97□□□□□ -0.81
RBM39-238ENST00000493853 PDE6BP35913 854 aa9.97□□□□□ -0.81
RBM39-238ENST00000493853 DCTN1Q14203 1278 aa9.97□□□□□ -0.81
RBM39-238ENST00000493853 TAF7Q15545 349 aaPredicted RBP9.97□□□□□ -0.81
RBM39-238ENST00000493853 TBC1D9BQ66K14 1250 aa9.97□□□□□ -0.81
RBM39-238ENST00000493853 DZIP3Q86Y13 1208 aaKnown RBP9.97□□□□□ -0.81
RBM39-238ENST00000493853 ZNF622Q969S3 477 aaKnown RBP eCLIP9.97□□□□□ -0.81
RBM39-238ENST00000493853 PDZRN3Q9UPQ7 1066 aa9.97□□□□□ -0.81
RBM39-238ENST00000493853 V9GY48 417 aaPredicted RBP9.97□□□□□ -0.81
RBM39-238ENST00000493853 CEMIPQ8WUJ3 1361 aa9.97□□□□□ -0.81
RBM39-238ENST00000493853 C4AP0C0L4 1744 aa9.96□□□□□ -0.81
RBM39-238ENST00000493853 TOMM70O94826 608 aa9.96□□□□□ -0.82
RBM39-238ENST00000493853 HSPA6P17066 643 aa9.96□□□□□ -0.82
RBM39-238ENST00000493853 ZNF652Q9Y2D9 606 aa9.96□□□□□ -0.82
RBM39-238ENST00000493853 USP16Q9Y5T5 823 aa9.96□□□□□ -0.82
RBM39-238ENST00000493853 KDM2BQ8NHM5 1336 aa9.96□□□□□ -0.82
RBM39-238ENST00000493853 KCPQ6ZWJ8 1503 aa9.96□□□□□ -0.82
RBM39-238ENST00000493853 PIP4K2AP48426 406 aaPredicted RBP9.95□□□□□ -0.82
RBM39-238ENST00000493853 ST5P78524 1137 aa9.95□□□□□ -0.82
RBM39-238ENST00000493853 CNBD1Q8NA66 436 aa9.95□□□□□ -0.82
RBM39-238ENST00000493853 ANKLE1Q8NAG6 615 aa9.95□□□□□ -0.82
RBM39-238ENST00000493853 PNISRQ8TF01 805 aaKnown RBP9.95□□□□□ -0.82
RBM39-238ENST00000493853 REPIN1Q9BWE0 567 aaKnown RBP9.95□□□□□ -0.82
RBM39-238ENST00000493853 BRIP1Q9BX63 1249 aa9.95□□□□□ -0.82
RBM39-238ENST00000493853 NMRK2Q9NPI5 230 aa9.95□□□□□ -0.82
RBM39-238ENST00000493853 COL5A3P25940 1745 aaPredicted RBP9.95□□□□□ -0.82
RBM39-238ENST00000493853 SCN11AQ9UI33 1791 aa9.95□□□□□ -0.82
RBM39-238ENST00000493853 CARMIL3Q8ND23 1372 aa9.94□□□□□ -0.82
RBM39-238ENST00000493853 MAPK8IP3Q9UPT6 1336 aa9.94□□□□□ -0.82
RBM39-238ENST00000493853 LMNB1P20700 586 aa9.94□□□□□ -0.82
RBM39-238ENST00000493853 SSTR3P32745 418 aaPredicted RBP9.94□□□□□ -0.82
RBM39-238ENST00000493853 USP46P62068 366 aa9.94□□□□□ -0.82
RBM39-238ENST00000493853 NBPF5PQ86XG9 351 aaPredicted RBP9.94□□□□□ -0.82
RBM39-238ENST00000493853 NUTM1Q86Y26 1132 aa9.94□□□□□ -0.82
RBM39-238ENST00000493853 CCDC24Q8N4L8 307 aa9.94□□□□□ -0.82
RBM39-238ENST00000493853 MIS18AQ9NYP9 233 aa9.94□□□□□ -0.82
RBM39-238ENST00000493853 MYH14Q7Z406 1995 aaKnown RBP9.94□□□□□ -0.82
RBM39-238ENST00000493853 TJP1Q07157 1748 aa9.93□□□□□ -0.82
RBM39-238ENST00000493853 PRAMEF22A3QJZ6 481 aa9.93□□□□□ -0.82
RBM39-238ENST00000493853 CAMTA2O94983 1202 aa9.93□□□□□ -0.82
RBM39-238ENST00000493853 GTF2E1P29083 439 aaPredicted RBP9.93□□□□□ -0.82
RBM39-238ENST00000493853 RASSF7Q02833 373 aa9.93□□□□□ -0.82
RBM39-238ENST00000493853 AMHR2Q16671 573 aa9.93□□□□□ -0.82
RBM39-238ENST00000493853 PRR5LQ6MZQ0 368 aa9.93□□□□□ -0.82
RBM39-238ENST00000493853 CLEC4GQ6UXB4 293 aa9.93□□□□□ -0.82
RBM39-238ENST00000493853 THAP11Q96EK4 314 aa9.93□□□□□ -0.82
RBM39-238ENST00000493853 RRAGCQ9HB90 399 aa9.93□□□□□ -0.82
RBM39-238ENST00000493853 SALL2Q9Y467 1007 aaPredicted RBP9.93□□□□□ -0.82
RBM39-238ENST00000493853 C21orf2O43822 256 aa9.92□□□□□ -0.82
RBM39-238ENST00000493853 SLC19A1P41440 591 aa9.92□□□□□ -0.82
RBM39-238ENST00000493853 RALBP1Q15311 655 aa9.92□□□□□ -0.82
RBM39-238ENST00000493853 NFE2L2Q16236 605 aa9.92□□□□□ -0.82
RBM39-238ENST00000493853 Q3C1V9 767 aa9.92□□□□□ -0.82
RBM39-238ENST00000493853 BRICD5Q6PL45 260 aa9.92□□□□□ -0.82
RBM39-238ENST00000493853 TPTE2Q6XPS3 522 aa9.92□□□□□ -0.82
RBM39-238ENST00000493853 NGEFQ8N5V2 710 aa9.92□□□□□ -0.82
RBM39-238ENST00000493853 CNKSR1Q969H4 720 aa9.92□□□□□ -0.82
RBM39-238ENST00000493853 N4BP2Q86UW6 1770 aaPredicted RBP9.91□□□□□ -0.82
RBM39-238ENST00000493853 FAM177BA6PVY3 158 aa9.91□□□□□ -0.82
RBM39-238ENST00000493853 TRIM66O15016 1216 aa9.91□□□□□ -0.82
RBM39-238ENST00000493853 RNF19BQ6ZMZ0 732 aa9.91□□□□□ -0.82
RBM39-238ENST00000493853 NIP7Q9Y221 180 aaKnown RBP eCLIP9.91□□□□□ -0.82
RBM39-238ENST00000493853 RRP7AQ9Y3A4 280 aaKnown RBP9.91□□□□□ -0.82
RBM39-238ENST00000493853 HOXA2O43364 376 aa9.9□□□□□ -0.82
RBM39-238ENST00000493853 GFRA3O60609 400 aa9.9□□□□□ -0.82
RBM39-238ENST00000493853 DDX10Q13206 875 aaKnown RBP9.9□□□□□ -0.82
RBM39-238ENST00000493853 SOGA3Q5TF21 947 aa9.9□□□□□ -0.82
RBM39-238ENST00000493853 GIGYF2Q6Y7W6 1299 aaKnown RBP9.9□□□□□ -0.82
RBM39-238ENST00000493853 KIF6Q6ZMV9 814 aa9.9□□□□□ -0.82
RBM39-238ENST00000493853 FAM160A2Q8N612 972 aaPredicted RBP9.9□□□□□ -0.82
RBM39-238ENST00000493853 MASTLQ96GX5 879 aa9.9□□□□□ -0.82
RBM39-238ENST00000493853 ADAMTS7Q9UKP4 1686 aa9.9□□□□□ -0.83
RBM39-238ENST00000493853 KIF13BQ9NQT8 1826 aa9.89□□□□□ -0.83
RBM39-238ENST00000493853 ZC3H4Q9UPT8 1303 aaKnown RBP9.89□□□□□ -0.83
RBM39-238ENST00000493853 GLTPD2A6NH11 291 aa9.89□□□□□ -0.83
RBM39-238ENST00000493853 SRGNP10124 158 aa9.89□□□□□ -0.83
RBM39-238ENST00000493853 MYL6BP14649 208 aa9.89□□□□□ -0.83
RBM39-238ENST00000493853 VEGFAP15692 232 aaPredicted RBP9.89□□□□□ -0.83
RBM39-238ENST00000493853 RIPK4P57078 832 aa9.89□□□□□ -0.83
RBM39-238ENST00000493853 FSTL1Q12841 308 aa9.89□□□□□ -0.83
RBM39-238ENST00000493853 ERFEQ4G0M1 354 aa9.89□□□□□ -0.83
RBM39-238ENST00000493853 STYK1Q6J9G0 422 aa9.89□□□□□ -0.83
RBM39-238ENST00000493853 NBPF10Q6P3W6 841 aaKnown RBP9.89□□□□□ -0.83
RBM39-238ENST00000493853 NBPF15Q8N660 670 aa9.89□□□□□ -0.83
RBM39-238ENST00000493853 HLA-CQ95604 372 aa9.89□□□□□ -0.83
RBM39-238ENST00000493853 PLEKHF1Q96S99 279 aa9.89□□□□□ -0.83
RBM39-238ENST00000493853 THUMPD2Q9BTF0 503 aaKnown RBP9.89□□□□□ -0.83
RBM39-238ENST00000493853 NFKBIEO00221 500 aa9.88□□□□□ -0.83
RBM39-238ENST00000493853 NPR1P16066 1061 aa9.88□□□□□ -0.83
RBM39-238ENST00000493853 ALDH1B1P30837 517 aa9.88□□□□□ -0.83
RBM39-238ENST00000493853 EIF4A1P60842 406 aaKnown RBP9.88□□□□□ -0.83
RBM39-238ENST00000493853 LMOD3Q0VAK6 560 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms