RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 SSH3Q8TE77 659 aa9.42□□□□□ -0.9
VEGFA-214ENST00000493786 COPRSQ9NQ92 184 aa9.42□□□□□ -0.9
VEGFA-214ENST00000493786 KIAA1551Q9HCM1 1747 aa9.42□□□□□ -0.9
VEGFA-214ENST00000493786 XDHP47989 1333 aa9.41□□□□□ -0.9
VEGFA-214ENST00000493786 EYA2O00167 538 aa9.41□□□□□ -0.9
VEGFA-214ENST00000493786 CIAO1O76071 339 aa9.41□□□□□ -0.9
VEGFA-214ENST00000493786 IL15P40933 162 aaPredicted RBP9.41□□□□□ -0.9
VEGFA-214ENST00000493786 RFX5P48382 616 aaPredicted RBP9.41□□□□□ -0.9
VEGFA-214ENST00000493786 CHRNDQ07001 517 aa9.41□□□□□ -0.9
VEGFA-214ENST00000493786 ARHGAP27Q6ZUM4 889 aa9.41□□□□□ -0.9
VEGFA-214ENST00000493786 ERC1Q8IUD2 1116 aa9.41□□□□□ -0.9
VEGFA-214ENST00000493786 RWDD1Q9H446 243 aaPredicted RBP9.41□□□□□ -0.9
VEGFA-214ENST00000493786 CEP126Q9P2H0 1117 aa9.41□□□□□ -0.9
VEGFA-214ENST00000493786 ZBTB47Q9UFB7 747 aaPredicted RBP9.41□□□□□ -0.9
VEGFA-214ENST00000493786 GGA1Q9UJY5 639 aa9.41□□□□□ -0.9
VEGFA-214ENST00000493786 MINPP1Q9UNW1 487 aa9.41□□□□□ -0.9
VEGFA-214ENST00000493786 NSFL1CQ9UNZ2 370 aaKnown RBP9.41□□□□□ -0.9
VEGFA-214ENST00000493786 PA2G4Q9UQ80 394 aaKnown RBP9.41□□□□□ -0.9
VEGFA-214ENST00000493786 C6orf229H3BNL8 230 aa9.4□□□□□ -0.9
VEGFA-214ENST00000493786 UFL1O94874 794 aa9.4□□□□□ -0.9
VEGFA-214ENST00000493786 ATP2B4P23634 1241 aa9.4□□□□□ -0.9
VEGFA-214ENST00000493786 LRRC24Q50LG9 513 aa9.4□□□□□ -0.9
VEGFA-214ENST00000493786 C7orf43Q8WVR3 580 aa9.4□□□□□ -0.9
VEGFA-214ENST00000493786 EYA3Q99504 573 aa9.4□□□□□ -0.9
VEGFA-214ENST00000493786 PUS3Q9BZE2 481 aaKnown RBP9.4□□□□□ -0.9
VEGFA-214ENST00000493786 TAOK3Q9H2K8 898 aa9.4□□□□□ -0.9
VEGFA-214ENST00000493786 PCDHB15Q9Y5E8 787 aa9.4□□□□□ -0.9
VEGFA-214ENST00000493786 G3V3G9 751 aa9.39□□□□□ -0.91
VEGFA-214ENST00000493786 RAB11FIP3O75154 756 aa9.39□□□□□ -0.91
VEGFA-214ENST00000493786 YBX3P16989 372 aaKnown RBP eCLIP9.39□□□□□ -0.91
VEGFA-214ENST00000493786 GPSM2P81274 684 aa9.39□□□□□ -0.91
VEGFA-214ENST00000493786 FKBP4Q02790 459 aaKnown RBP eCLIP9.39□□□□□ -0.91
VEGFA-214ENST00000493786 DCAF8Q5TAQ9 597 aa9.39□□□□□ -0.91
VEGFA-214ENST00000493786 ERICH6BQ5W0A0 696 aa9.39□□□□□ -0.91
VEGFA-214ENST00000493786 OLFM4Q6UX06 510 aa9.39□□□□□ -0.91
VEGFA-214ENST00000493786 SIRT2Q8IXJ6 389 aa9.39□□□□□ -0.91
VEGFA-214ENST00000493786 HELBQ8NG08 1087 aaPredicted RBP9.39□□□□□ -0.91
VEGFA-214ENST00000493786 PSMD1Q99460 953 aa9.39□□□□□ -0.91
VEGFA-214ENST00000493786 PODXL2Q9NZ53 605 aa9.39□□□□□ -0.91
VEGFA-214ENST00000493786 EXOC6BQ9Y2D4 811 aa9.39□□□□□ -0.91
VEGFA-214ENST00000493786 AKAP2Q9Y2D5 859 aa9.39□□□□□ -0.91
VEGFA-214ENST00000493786 LEMD3Q9Y2U8 911 aa9.39□□□□□ -0.91
VEGFA-214ENST00000493786 NOP58Q9Y2X3 529 aaKnown RBP9.39□□□□□ -0.91
VEGFA-214ENST00000493786 RIPOR2Q9Y4F9 1068 aa9.39□□□□□ -0.91
VEGFA-214ENST00000493786 SLX4Q8IY92 1834 aa9.39□□□□□ -0.91
VEGFA-214ENST00000493786 CACNA1SQ13698 1873 aa9.38□□□□□ -0.91
VEGFA-214ENST00000493786 APBB1O00213 710 aa9.38□□□□□ -0.91
VEGFA-214ENST00000493786 TAF5LO75529 589 aa9.38□□□□□ -0.91
VEGFA-214ENST00000493786 PDE8BO95263 885 aa9.38□□□□□ -0.91
VEGFA-214ENST00000493786 IFIT1P09914 478 aaKnown RBP9.38□□□□□ -0.91
VEGFA-214ENST00000493786 SLC5A1P13866 664 aa9.38□□□□□ -0.91
VEGFA-214ENST00000493786 HDAC1Q13547 482 aaPredicted RBP9.38□□□□□ -0.91
VEGFA-214ENST00000493786 PUM3Q15397 648 aaKnown RBP9.38□□□□□ -0.91
VEGFA-214ENST00000493786 ATG9AQ7Z3C6 839 aa9.38□□□□□ -0.91
VEGFA-214ENST00000493786 TBC1D16Q8TBP0 767 aa9.38□□□□□ -0.91
VEGFA-214ENST00000493786 KIF1BPQ96EK5 621 aa9.38□□□□□ -0.91
VEGFA-214ENST00000493786 ZC3H12CQ9C0D7 883 aaKnown RBP9.38□□□□□ -0.91
VEGFA-214ENST00000493786 BRCA1P38398 1863 aaKnown RBP9.38□□□□□ -0.91
VEGFA-214ENST00000493786 ZNF804BA4D1E1 1349 aa9.37□□□□□ -0.91
VEGFA-214ENST00000493786 LTBP3Q9NS15 1303 aa9.37□□□□□ -0.91
VEGFA-214ENST00000493786 PPIP5K2O43314 1243 aa9.37□□□□□ -0.91
VEGFA-214ENST00000493786 RASSF7Q02833 373 aa9.37□□□□□ -0.91
VEGFA-214ENST00000493786 TFCP2Q12800 502 aa9.37□□□□□ -0.91
VEGFA-214ENST00000493786 UBE4AQ14139 1066 aa9.37□□□□□ -0.91
VEGFA-214ENST00000493786 ATP2B3Q16720 1220 aa9.37□□□□□ -0.91
VEGFA-214ENST00000493786 WASHC4Q2M389 1173 aa9.37□□□□□ -0.91
VEGFA-214ENST00000493786 VPS37DQ86XT2 251 aa9.37□□□□□ -0.91
VEGFA-214ENST00000493786 GCC1Q96CN9 775 aa9.37□□□□□ -0.91
VEGFA-214ENST00000493786 RTFDC1Q9BY42 306 aaPredicted RBP9.37□□□□□ -0.91
VEGFA-214ENST00000493786 VPS33BQ9H267 617 aa9.37□□□□□ -0.91
VEGFA-214ENST00000493786 ZNF277Q9NRM2 450 aaPredicted RBP9.37□□□□□ -0.91
VEGFA-214ENST00000493786 SPEF2Q9C093 1822 aa9.37□□□□□ -0.91
VEGFA-214ENST00000493786 ARFGEF1Q9Y6D6 1849 aa9.37□□□□□ -0.91
VEGFA-214ENST00000493786 LRRC37AA6NMS7 1700 aa9.36□□□□□ -0.91
VEGFA-214ENST00000493786 TAF1P21675 1872 aa9.36□□□□□ -0.91
VEGFA-214ENST00000493786 COL4A1P02462 1669 aa9.36□□□□□ -0.91
VEGFA-214ENST00000493786 NFKBIEO00221 500 aa9.36□□□□□ -0.91
VEGFA-214ENST00000493786 LMNB1P20700 586 aa9.36□□□□□ -0.91
VEGFA-214ENST00000493786 IARSP41252 1262 aaKnown RBP9.36□□□□□ -0.91
VEGFA-214ENST00000493786 CAVIN4Q5BKX8 364 aa9.36□□□□□ -0.91
VEGFA-214ENST00000493786 GORABQ5T7V8 394 aa9.36□□□□□ -0.91
VEGFA-214ENST00000493786 ZNF804AQ7Z570 1209 aa9.36□□□□□ -0.91
VEGFA-214ENST00000493786 SLC51AQ86UW1 340 aa9.36□□□□□ -0.91
VEGFA-214ENST00000493786 NIM1KQ8IY84 436 aa9.36□□□□□ -0.91
VEGFA-214ENST00000493786 CLASRPQ8N2M8 674 aaKnown RBP9.36□□□□□ -0.91
VEGFA-214ENST00000493786 LARGE2Q8N3Y3 721 aa9.36□□□□□ -0.91
VEGFA-214ENST00000493786 JDP2Q8WYK2 163 aa9.36□□□□□ -0.91
VEGFA-214ENST00000493786 LPIN2Q92539 896 aa9.36□□□□□ -0.91
VEGFA-214ENST00000493786 CCDC136Q96JN2 1154 aa9.36□□□□□ -0.91
VEGFA-214ENST00000493786 LRRCC1Q9C099 1032 aa9.36□□□□□ -0.91
VEGFA-214ENST00000493786 BCL11AQ9H165 835 aa9.36□□□□□ -0.91
VEGFA-214ENST00000493786 DCTPP1Q9H773 170 aa9.36□□□□□ -0.91
VEGFA-214ENST00000493786 POLLQ9UGP5 575 aa9.36□□□□□ -0.91
VEGFA-214ENST00000493786 MED23Q9ULK4 1368 aa9.36□□□□□ -0.91
VEGFA-214ENST00000493786 GOLGB1Q14789 3259 aaKnown RBP9.36□□□□□ -0.91
VEGFA-214ENST00000493786 RIMBP2O15034 1052 aa9.35□□□□□ -0.91
VEGFA-214ENST00000493786 SASH1O94885 1247 aa9.35□□□□□ -0.91
VEGFA-214ENST00000493786 IFIT2P09913 472 aaKnown RBP9.35□□□□□ -0.91
VEGFA-214ENST00000493786 KIAA2012Q0VF49 1180 aa9.35□□□□□ -0.91
VEGFA-214ENST00000493786 AOC3Q16853 763 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms