RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 RPS8P62241 208 aaKnown RBP15.42■□□□□ 0.06
SNX17-208ENST00000493711 GRAPQ13588 217 aa15.42■□□□□ 0.06
SNX17-208ENST00000493711 C3orf67Q6ZVT6 689 aa15.42■□□□□ 0.06
SNX17-208ENST00000493711 SIRT2Q8IXJ6 389 aa15.42■□□□□ 0.06
SNX17-208ENST00000493711 GRAPLQ8TC17 118 aaPredicted RBP15.42■□□□□ 0.06
SNX17-208ENST00000493711 GOLGB1Q14789 3259 aaKnown RBP15.42■□□□□ 0.06
SNX17-208ENST00000493711 CIAO1O76071 339 aa15.41■□□□□ 0.06
SNX17-208ENST00000493711 RFX5P48382 616 aaPredicted RBP15.41■□□□□ 0.06
SNX17-208ENST00000493711 ERC1Q8IUD2 1116 aa15.41■□□□□ 0.06
SNX17-208ENST00000493711 GCC1Q96CN9 775 aa15.41■□□□□ 0.06
SNX17-208ENST00000493711 CCDC136Q96JN2 1154 aa15.41■□□□□ 0.06
SNX17-208ENST00000493711 MPHOSPH8Q99549 860 aa15.41■□□□□ 0.06
SNX17-208ENST00000493711 TMX4Q9H1E5 349 aaPredicted RBP15.41■□□□□ 0.06
SNX17-208ENST00000493711 NOP58Q9Y2X3 529 aaKnown RBP15.41■□□□□ 0.06
SNX17-208ENST00000493711 RAB11FIP3O75154 756 aa15.4■□□□□ 0.06
SNX17-208ENST00000493711 PTPN12Q05209 780 aaKnown RBP15.4■□□□□ 0.06
SNX17-208ENST00000493711 G3BP1Q13283 466 aaKnown RBP eCLIP15.4■□□□□ 0.06
SNX17-208ENST00000493711 LDHAL6AQ6ZMR3 332 aa15.4■□□□□ 0.06
SNX17-208ENST00000493711 ZNF622Q969S3 477 aaKnown RBP eCLIP15.4■□□□□ 0.06
SNX17-208ENST00000493711 CCDC85AQ96PX6 553 aaPredicted RBP15.4■□□□□ 0.06
SNX17-208ENST00000493711 DCTPP1Q9H773 170 aa15.4■□□□□ 0.06
SNX17-208ENST00000493711 BSDC1Q9NW68 430 aaPredicted RBP15.4■□□□□ 0.06
SNX17-208ENST00000493711 EYA2O00167 538 aa15.39■□□□□ 0.05
SNX17-208ENST00000493711 SURF6O75683 361 aaKnown RBP15.39■□□□□ 0.05
SNX17-208ENST00000493711 IL15P40933 162 aaPredicted RBP15.39■□□□□ 0.05
SNX17-208ENST00000493711 GRIPAP1Q4V328 841 aa15.39■□□□□ 0.05
SNX17-208ENST00000493711 SEC31BQ9NQW1 1179 aa15.39■□□□□ 0.05
SNX17-208ENST00000493711 PIM2Q9P1W9 311 aa15.39■□□□□ 0.05
SNX17-208ENST00000493711 DPEP1P16444 411 aa15.38■□□□□ 0.05
SNX17-208ENST00000493711 OS9Q13438 667 aaPredicted RBP15.38■□□□□ 0.05
SNX17-208ENST00000493711 CC2D2BQ6DHV5 1058 aa15.38■□□□□ 0.05
SNX17-208ENST00000493711 TTLL6Q8N841 843 aa15.38■□□□□ 0.05
SNX17-208ENST00000493711 CNNM1Q9NRU3 951 aa15.38■□□□□ 0.05
SNX17-208ENST00000493711 ZBTB47Q9UFB7 747 aaPredicted RBP15.38■□□□□ 0.05
SNX17-208ENST00000493711 MROH5Q6ZUA9 1318 aa15.38■□□□□ 0.05
SNX17-208ENST00000493711 LAMB2P55268 1798 aa15.37■□□□□ 0.05
SNX17-208ENST00000493711 CHRNA5P30532 468 aa15.37■□□□□ 0.05
SNX17-208ENST00000493711 SOGA3Q5TF21 947 aa15.37■□□□□ 0.05
SNX17-208ENST00000493711 CENPQQ7L2Z9 268 aaPredicted RBP15.37■□□□□ 0.05
SNX17-208ENST00000493711 KLHL34Q8N239 644 aa15.37■□□□□ 0.05
SNX17-208ENST00000493711 ANKRD2Q9GZV1 360 aa15.37■□□□□ 0.05
SNX17-208ENST00000493711 A0A0G2JLW4 131 aa15.36■□□□□ 0.05
SNX17-208ENST00000493711 PPEF1O14829 653 aaPredicted RBP15.36■□□□□ 0.05
SNX17-208ENST00000493711 GPR162Q16538 588 aa15.36■□□□□ 0.05
SNX17-208ENST00000493711 SP8Q8IXZ3 490 aa15.36■□□□□ 0.05
SNX17-208ENST00000493711 CELF1Q92879 486 aaKnown RBP15.36■□□□□ 0.05
SNX17-208ENST00000493711 CEP126Q9P2H0 1117 aa15.36■□□□□ 0.05
SNX17-208ENST00000493711 DDX60Q8IY21 1712 aaKnown RBP15.35■□□□□ 0.05
SNX17-208ENST00000493711 DALRD3Q5D0E6 543 aaKnown RBP15.35■□□□□ 0.05
SNX17-208ENST00000493711 PRPF40BQ6NWY9 871 aaKnown RBP15.35■□□□□ 0.05
SNX17-208ENST00000493711 SMC5Q8IY18 1101 aa15.35■□□□□ 0.05
SNX17-208ENST00000493711 KIF1BPQ96EK5 621 aa15.35■□□□□ 0.05
SNX17-208ENST00000493711 ZNF594Q96JF6 807 aaPredicted RBP15.35■□□□□ 0.05
SNX17-208ENST00000493711 SIL1Q9H173 461 aa15.35■□□□□ 0.05
SNX17-208ENST00000493711 PA2G4Q9UQ80 394 aaKnown RBP15.35■□□□□ 0.05
SNX17-208ENST00000493711 AKAP2Q9Y2D5 859 aa15.35■□□□□ 0.05
SNX17-208ENST00000493711 ATP6V0A2Q9Y487 856 aa15.35■□□□□ 0.05
SNX17-208ENST00000493711 RIPOR2Q9Y4F9 1068 aa15.35■□□□□ 0.05
SNX17-208ENST00000493711 GTF3C3Q9Y5Q9 886 aa15.35■□□□□ 0.05
SNX17-208ENST00000493711 GABBR2O75899 941 aa15.34■□□□□ 0.05
SNX17-208ENST00000493711 IGHDP01880 384 aa15.34■□□□□ 0.05
SNX17-208ENST00000493711 KCNA3P22001 575 aa15.34■□□□□ 0.05
SNX17-208ENST00000493711 METTL24Q5JXM2 366 aa15.34■□□□□ 0.05
SNX17-208ENST00000493711 KLHDC4Q8TBB5 520 aa15.34■□□□□ 0.05
SNX17-208ENST00000493711 LRRCC1Q9C099 1032 aa15.34■□□□□ 0.05
SNX17-208ENST00000493711 GPR108Q9NPR9 543 aa15.34■□□□□ 0.05
SNX17-208ENST00000493711 EXOC6BQ9Y2D4 811 aa15.34■□□□□ 0.05
SNX17-208ENST00000493711 TNRC6CQ9HCJ0 1690 aaKnown RBP15.33■□□□□ 0.04
SNX17-208ENST00000493711 ATG9AQ7Z3C6 839 aa15.33■□□□□ 0.04
SNX17-208ENST00000493711 MINPP1Q9UNW1 487 aa15.33■□□□□ 0.04
SNX17-208ENST00000493711 LRRC24Q50LG9 513 aa15.32■□□□□ 0.04
SNX17-208ENST00000493711 RTKN2Q8IZC4 609 aa15.32■□□□□ 0.04
SNX17-208ENST00000493711 RHPN1Q8TCX5 695 aa15.32■□□□□ 0.04
SNX17-208ENST00000493711 PUS3Q9BZE2 481 aaKnown RBP15.32■□□□□ 0.04
SNX17-208ENST00000493711 PODXL2Q9NZ53 605 aa15.32■□□□□ 0.04
SNX17-208ENST00000493711 CHD4Q14839 1912 aa15.32■□□□□ 0.04
SNX17-208ENST00000493711 XDHP47989 1333 aa15.32■□□□□ 0.04
SNX17-208ENST00000493711 PDE8BO95263 885 aa15.31■□□□□ 0.04
SNX17-208ENST00000493711 CHRNDQ07001 517 aa15.31■□□□□ 0.04
SNX17-208ENST00000493711 CLASRPQ8N2M8 674 aaKnown RBP15.31■□□□□ 0.04
SNX17-208ENST00000493711 ANKIB1Q9P2G1 1089 aa15.31■□□□□ 0.04
SNX17-208ENST00000493711 LEMD3Q9Y2U8 911 aa15.31■□□□□ 0.04
SNX17-208ENST00000493711 KDM2BQ8NHM5 1336 aa15.31■□□□□ 0.04
SNX17-208ENST00000493711 SASH1O94885 1247 aa15.3■□□□□ 0.04
SNX17-208ENST00000493711 ATP2B4P23634 1241 aa15.3■□□□□ 0.04
SNX17-208ENST00000493711 TFCP2Q12800 502 aa15.3■□□□□ 0.04
SNX17-208ENST00000493711 UBE4AQ14139 1066 aa15.3■□□□□ 0.04
SNX17-208ENST00000493711 PUM3Q15397 648 aaKnown RBP15.3■□□□□ 0.04
SNX17-208ENST00000493711 CCDC93Q567U6 631 aa15.3■□□□□ 0.04
SNX17-208ENST00000493711 B4GALNT3Q6L9W6 998 aa15.3■□□□□ 0.04
SNX17-208ENST00000493711 SUPT20HQ8NEM7 779 aa15.3■□□□□ 0.04
SNX17-208ENST00000493711 C7orf43Q8WVR3 580 aa15.3■□□□□ 0.04
SNX17-208ENST00000493711 KIF13BQ9NQT8 1826 aa15.3■□□□□ 0.04
SNX17-208ENST00000493711 ANKRD31Q8N7Z5 1873 aa15.29■□□□□ 0.04
SNX17-208ENST00000493711 KCNJ4P48050 445 aa15.29■□□□□ 0.04
SNX17-208ENST00000493711 NUCB1Q02818 461 aa15.29■□□□□ 0.04
SNX17-208ENST00000493711 ANKRD45Q5TZF3 282 aa15.29■□□□□ 0.04
SNX17-208ENST00000493711 DPP8Q6V1X1 898 aaPredicted RBP15.29■□□□□ 0.04
SNX17-208ENST00000493711 MPNDQ8N594 471 aa15.29■□□□□ 0.04
SNX17-208ENST00000493711 NLGN2Q8NFZ4 835 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms