RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 H7C1D1 291 aa11.74□□□□□ -0.53
NFIA-213ENST00000493627 PSMD14O00487 310 aa11.74□□□□□ -0.53
NFIA-213ENST00000493627 ECE2O60344 883 aa11.74□□□□□ -0.53
NFIA-213ENST00000493627 CELF2O95319 508 aaKnown RBP11.74□□□□□ -0.53
NFIA-213ENST00000493627 ECE1P42892 770 aa11.74□□□□□ -0.53
NFIA-213ENST00000493627 HIRAP54198 1017 aaPredicted RBP11.74□□□□□ -0.53
NFIA-213ENST00000493627 TBC1D16Q8TBP0 767 aa11.74□□□□□ -0.53
NFIA-213ENST00000493627 ZC3H15Q8WU90 426 aaKnown RBP11.74□□□□□ -0.53
NFIA-213ENST00000493627 JARID2Q92833 1246 aaPredicted RBP11.74□□□□□ -0.53
NFIA-213ENST00000493627 PGAP2Q9UHJ9 254 aa11.74□□□□□ -0.53
NFIA-213ENST00000493627 MAP3K2Q9Y2U5 619 aa11.74□□□□□ -0.53
NFIA-213ENST00000493627 RTL9Q8NET4 1388 aa11.74□□□□□ -0.53
NFIA-213ENST00000493627 TRPM7Q96QT4 1865 aa11.74□□□□□ -0.53
NFIA-213ENST00000493627 PDE8AO60658 829 aa11.73□□□□□ -0.53
NFIA-213ENST00000493627 UFL1O94874 794 aa11.73□□□□□ -0.53
NFIA-213ENST00000493627 MAP2K1Q02750 393 aaPredicted RBP11.73□□□□□ -0.53
NFIA-213ENST00000493627 GRM1Q13255 1194 aa11.73□□□□□ -0.53
NFIA-213ENST00000493627 DOK7Q18PE1 504 aa11.73□□□□□ -0.53
NFIA-213ENST00000493627 CCDC27Q2M243 656 aa11.73□□□□□ -0.53
NFIA-213ENST00000493627 CYP4F22Q6NT55 531 aa11.73□□□□□ -0.53
NFIA-213ENST00000493627 DPF2Q92785 391 aa11.73□□□□□ -0.53
NFIA-213ENST00000493627 CCDC85AQ96PX6 553 aaPredicted RBP11.73□□□□□ -0.53
NFIA-213ENST00000493627 STK31Q9BXU1 1019 aa11.73□□□□□ -0.53
NFIA-213ENST00000493627 PODXL2Q9NZ53 605 aa11.73□□□□□ -0.53
NFIA-213ENST00000493627 PI4KAP2A4QPH2 592 aa11.72□□□□□ -0.53
NFIA-213ENST00000493627 HSPA8P11142 646 aaKnown RBP11.72□□□□□ -0.53
NFIA-213ENST00000493627 RPS12P25398 132 aaKnown RBP11.72□□□□□ -0.53
NFIA-213ENST00000493627 LBX1P52954 281 aa11.72□□□□□ -0.53
NFIA-213ENST00000493627 CTSWP56202 376 aa11.72□□□□□ -0.53
NFIA-213ENST00000493627 KSR2Q6VAB6 950 aa11.72□□□□□ -0.53
NFIA-213ENST00000493627 CDC37L1Q7L3B6 337 aa11.72□□□□□ -0.53
NFIA-213ENST00000493627 SAMD7Q7Z3H4 446 aa11.72□□□□□ -0.53
NFIA-213ENST00000493627 SAPCD2Q86UD0 394 aa11.72□□□□□ -0.53
NFIA-213ENST00000493627 WWC1Q8IX03 1113 aa11.72□□□□□ -0.53
NFIA-213ENST00000493627 PI4KAP1Q8N8J0 262 aa11.72□□□□□ -0.53
NFIA-213ENST00000493627 ZNF408Q9H9D4 720 aa11.72□□□□□ -0.53
NFIA-213ENST00000493627 ANKIB1Q9P2G1 1089 aa11.72□□□□□ -0.53
NFIA-213ENST00000493627 GGA1Q9UJY5 639 aa11.72□□□□□ -0.53
NFIA-213ENST00000493627 EGFRP00533 1210 aa11.71□□□□□ -0.53
NFIA-213ENST00000493627 IGKV5-2P06315 115 aa11.71□□□□□ -0.53
NFIA-213ENST00000493627 NEXNQ0ZGT2 675 aa11.71□□□□□ -0.53
NFIA-213ENST00000493627 TWISTNBQ3B726 338 aaPredicted RBP11.71□□□□□ -0.53
NFIA-213ENST00000493627 TBC1D10BQ4KMP7 808 aaPredicted RBP11.71□□□□□ -0.53
NFIA-213ENST00000493627 ANKRD18AQ8IVF6 992 aa11.71□□□□□ -0.53
NFIA-213ENST00000493627 ZC3H12CQ9C0D7 883 aaKnown RBP11.71□□□□□ -0.53
NFIA-213ENST00000493627 KCNQ5Q9NR82 932 aa11.71□□□□□ -0.53
NFIA-213ENST00000493627 ZNF609O15014 1411 aa11.7□□□□□ -0.54
NFIA-213ENST00000493627 XDHP47989 1333 aa11.7□□□□□ -0.54
NFIA-213ENST00000493627 IL16Q14005 1332 aa11.7□□□□□ -0.54
NFIA-213ENST00000493627 CWF19L2Q2TBE0 894 aaKnown RBP11.7□□□□□ -0.54
NFIA-213ENST00000493627 HHIPL1Q96JK4 782 aa11.7□□□□□ -0.54
NFIA-213ENST00000493627 CDC5LQ99459 802 aaKnown RBP11.7□□□□□ -0.54
NFIA-213ENST00000493627 MRS2Q9HD23 443 aa11.7□□□□□ -0.54
NFIA-213ENST00000493627 FANCIQ9NVI1 1328 aa11.69□□□□□ -0.54
NFIA-213ENST00000493627 SCN9AQ15858 1988 aa11.69□□□□□ -0.54
NFIA-213ENST00000493627 NEURL1BA8MQ27 555 aa11.69□□□□□ -0.54
NFIA-213ENST00000493627 G3V3G9 751 aa11.69□□□□□ -0.54
NFIA-213ENST00000493627 AOC2O75106 756 aa11.69□□□□□ -0.54
NFIA-213ENST00000493627 KIF4BQ2VIQ3 1234 aa11.69□□□□□ -0.54
NFIA-213ENST00000493627 DCAF8Q5TAQ9 597 aa11.69□□□□□ -0.54
NFIA-213ENST00000493627 G2E3Q7L622 706 aa11.69□□□□□ -0.54
NFIA-213ENST00000493627 KRT26Q7Z3Y9 468 aa11.69□□□□□ -0.54
NFIA-213ENST00000493627 USP48Q86UV5 1035 aa11.69□□□□□ -0.54
NFIA-213ENST00000493627 BEGAINQ9BUH8 593 aa11.69□□□□□ -0.54
NFIA-213ENST00000493627 GREM2Q9H772 168 aa11.69□□□□□ -0.54
NFIA-213ENST00000493627 ADM5C9JUS6 153 aa11.68□□□□□ -0.54
NFIA-213ENST00000493627 VIL1P09327 827 aaKnown RBP11.68□□□□□ -0.54
NFIA-213ENST00000493627 ATP2B4P23634 1241 aa11.68□□□□□ -0.54
NFIA-213ENST00000493627 MAP2K2P36507 400 aa11.68□□□□□ -0.54
NFIA-213ENST00000493627 FLIIQ13045 1269 aa11.68□□□□□ -0.54
NFIA-213ENST00000493627 RBM26Q5T8P6 1007 aaKnown RBP11.68□□□□□ -0.54
NFIA-213ENST00000493627 DLK2Q6UY11 383 aa11.68□□□□□ -0.54
NFIA-213ENST00000493627 UBE3BQ7Z3V4 1068 aa11.68□□□□□ -0.54
NFIA-213ENST00000493627 TTLL11Q8NHH1 800 aa11.68□□□□□ -0.54
NFIA-213ENST00000493627 GGA3Q9NZ52 723 aa11.68□□□□□ -0.54
NFIA-213ENST00000493627 MED23Q9ULK4 1368 aa11.67□□□□□ -0.54
NFIA-213ENST00000493627 ANP32CO43423 234 aa11.67□□□□□ -0.54
NFIA-213ENST00000493627 HUNKP57058 714 aa11.67□□□□□ -0.54
NFIA-213ENST00000493627 RSBN1LQ6PCB5 846 aaPredicted RBP11.67□□□□□ -0.54
NFIA-213ENST00000493627 DCPSQ96C86 337 aaKnown RBP11.67□□□□□ -0.54
NFIA-213ENST00000493627 ZEB1P37275 1124 aaPredicted RBP11.66□□□□□ -0.54
NFIA-213ENST00000493627 BRPF1P55201 1214 aaPredicted RBP11.66□□□□□ -0.54
NFIA-213ENST00000493627 ZNF280AP59817 542 aaPredicted RBP11.66□□□□□ -0.54
NFIA-213ENST00000493627 FKBP5Q13451 457 aaPredicted RBP11.66□□□□□ -0.54
NFIA-213ENST00000493627 SULF1Q8IWU6 871 aa11.66□□□□□ -0.54
NFIA-213ENST00000493627 AGBL3Q8NEM8 1001 aa11.66□□□□□ -0.54
NFIA-213ENST00000493627 BSDC1Q9NW68 430 aaPredicted RBP11.66□□□□□ -0.54
NFIA-213ENST00000493627 TSKSQ9UJT2 592 aa11.66□□□□□ -0.54
NFIA-213ENST00000493627 MYH3P11055 1940 aa11.66□□□□□ -0.54
NFIA-213ENST00000493627 PSME4Q14997 1843 aa11.65□□□□□ -0.54
NFIA-213ENST00000493627 SPEF2Q9C093 1822 aa11.65□□□□□ -0.54
NFIA-213ENST00000493627 ASTN2O75129 1339 aaPredicted RBP11.65□□□□□ -0.54
NFIA-213ENST00000493627 WTIPA6NIX2 430 aaPredicted RBP11.65□□□□□ -0.54
NFIA-213ENST00000493627 H7C1W4 665 aa11.65□□□□□ -0.54
NFIA-213ENST00000493627 CA12O43570 354 aa11.65□□□□□ -0.54
NFIA-213ENST00000493627 NOGQ13253 232 aa11.65□□□□□ -0.54
NFIA-213ENST00000493627 GCKRQ14397 625 aa11.65□□□□□ -0.54
NFIA-213ENST00000493627 FAM161AQ3B820 660 aa11.65□□□□□ -0.54
NFIA-213ENST00000493627 PODNQ7Z5L7 613 aa11.65□□□□□ -0.54
NFIA-213ENST00000493627 DNAAF4Q8WXU2 420 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms