RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 H7C1W4 665 aa14.61□□□□□ -0.07
CTSA-209ENST00000493522 PPEF1O14829 653 aaPredicted RBP14.61□□□□□ -0.07
CTSA-209ENST00000493522 PDE8AO60658 829 aa14.61□□□□□ -0.07
CTSA-209ENST00000493522 LARGE2Q8N3Y3 721 aa14.61□□□□□ -0.07
CTSA-209ENST00000493522 CLUAP1Q96AJ1 413 aa14.61□□□□□ -0.07
CTSA-209ENST00000493522 TMX4Q9H1E5 349 aaPredicted RBP14.61□□□□□ -0.07
CTSA-209ENST00000493522 WBP1LQ9NX94 342 aa14.61□□□□□ -0.07
CTSA-209ENST00000493522 ABT1Q9ULW3 272 aaKnown RBP14.61□□□□□ -0.07
CTSA-209ENST00000493522 CTSWP56202 376 aa14.6□□□□□ -0.07
CTSA-209ENST00000493522 MAP2K1Q02750 393 aaPredicted RBP14.6□□□□□ -0.07
CTSA-209ENST00000493522 DDX46Q7L014 1031 aaKnown RBP14.6□□□□□ -0.07
CTSA-209ENST00000493522 FTSJ3Q8IY81 847 aaKnown RBP14.6□□□□□ -0.07
CTSA-209ENST00000493522 CCDC85AQ96PX6 553 aaPredicted RBP14.6□□□□□ -0.07
CTSA-209ENST00000493522 CRAMP1Q96RY5 1269 aa14.6□□□□□ -0.07
CTSA-209ENST00000493522 COL4A5P29400 1685 aa14.59□□□□□ -0.07
CTSA-209ENST00000493522 SCNN1DP51172 638 aa14.59□□□□□ -0.07
CTSA-209ENST00000493522 CASP7P55210 303 aa14.59□□□□□ -0.07
CTSA-209ENST00000493522 SF3B3Q15393 1217 aaKnown RBP14.59□□□□□ -0.07
CTSA-209ENST00000493522 CCDC152Q4G0S7 254 aa14.59□□□□□ -0.07
CTSA-209ENST00000493522 NIM1KQ8IY84 436 aa14.59□□□□□ -0.07
CTSA-209ENST00000493522 WDR33Q9C0J8 1336 aaKnown RBP14.59□□□□□ -0.07
CTSA-209ENST00000493522 LBX1P52954 281 aa14.58□□□□□ -0.08
CTSA-209ENST00000493522 USP50Q70EL3 339 aaPredicted RBP14.58□□□□□ -0.08
CTSA-209ENST00000493522 LTBP1Q14766 1721 aa14.58□□□□□ -0.08
CTSA-209ENST00000493522 PPIP5K2O43314 1243 aa14.57□□□□□ -0.08
CTSA-209ENST00000493522 NBPF7P0C2Y1 421 aaPredicted RBP14.57□□□□□ -0.08
CTSA-209ENST00000493522 EPS15P42566 896 aa14.57□□□□□ -0.08
CTSA-209ENST00000493522 ECE1P42892 770 aa14.57□□□□□ -0.08
CTSA-209ENST00000493522 GRAPQ13588 217 aa14.57□□□□□ -0.08
CTSA-209ENST00000493522 PPP4R3CPQ6ZMV5 832 aa14.57□□□□□ -0.08
CTSA-209ENST00000493522 DZIP1LQ8IYY4 767 aaKnown RBP14.57□□□□□ -0.08
CTSA-209ENST00000493522 GRAPLQ8TC17 118 aaPredicted RBP14.57□□□□□ -0.08
CTSA-209ENST00000493522 PLA2G12BQ9BX93 195 aa14.57□□□□□ -0.08
CTSA-209ENST00000493522 VPS33BQ9H267 617 aa14.57□□□□□ -0.08
CTSA-209ENST00000493522 CHMP3Q9Y3E7 222 aa14.57□□□□□ -0.08
CTSA-209ENST00000493522 HSPA8P11142 646 aaKnown RBP14.56□□□□□ -0.08
CTSA-209ENST00000493522 FAM161AQ3B820 660 aa14.56□□□□□ -0.08
CTSA-209ENST00000493522 INTS3Q68E01 1043 aaKnown RBP14.56□□□□□ -0.08
CTSA-209ENST00000493522 PAXIP1Q6ZW49 1069 aaPredicted RBP14.56□□□□□ -0.08
CTSA-209ENST00000493522 TMEM57Q8N5G2 664 aa14.56□□□□□ -0.08
CTSA-209ENST00000493522 SUCLG2Q96I99 432 aa14.56□□□□□ -0.08
CTSA-209ENST00000493522 BEGAINQ9BUH8 593 aa14.56□□□□□ -0.08
CTSA-209ENST00000493522 UTYO14607 1347 aa14.56□□□□□ -0.08
CTSA-209ENST00000493522 RTL9Q8NET4 1388 aa14.56□□□□□ -0.08
CTSA-209ENST00000493522 UBTFL1P0CB47 393 aaPredicted RBP14.55□□□□□ -0.08
CTSA-209ENST00000493522 ITPRIPQ8IWB1 547 aa14.55□□□□□ -0.08
CTSA-209ENST00000493522 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.55□□□□□ -0.08
CTSA-209ENST00000493522 SUPT20HQ8NEM7 779 aa14.55□□□□□ -0.08
CTSA-209ENST00000493522 TTLL11Q8NHH1 800 aa14.55□□□□□ -0.08
CTSA-209ENST00000493522 CELF1Q92879 486 aaKnown RBP14.55□□□□□ -0.08
CTSA-209ENST00000493522 CAPNS2Q96L46 248 aa14.55□□□□□ -0.08
CTSA-209ENST00000493522 USP44Q9H0E7 712 aa14.55□□□□□ -0.08
CTSA-209ENST00000493522 GREM2Q9H772 168 aa14.55□□□□□ -0.08
CTSA-209ENST00000493522 SEC31BQ9NQW1 1179 aa14.55□□□□□ -0.08
CTSA-209ENST00000493522 ATP6V0A2Q9Y487 856 aa14.55□□□□□ -0.08
CTSA-209ENST00000493522 PLIN1O60240 522 aa14.54□□□□□ -0.08
CTSA-209ENST00000493522 MS4A1P11836 297 aa14.54□□□□□ -0.08
CTSA-209ENST00000493522 RLBP1P12271 317 aa14.54□□□□□ -0.08
CTSA-209ENST00000493522 FOXO4P98177 505 aa14.54□□□□□ -0.08
CTSA-209ENST00000493522 AOC3Q16853 763 aa14.54□□□□□ -0.08
CTSA-209ENST00000493522 EPHA10Q5JZY3 1008 aa14.54□□□□□ -0.08
CTSA-209ENST00000493522 SLC51AQ86UW1 340 aa14.54□□□□□ -0.08
CTSA-209ENST00000493522 PANK1Q8TE04 598 aa14.54□□□□□ -0.08
CTSA-209ENST00000493522 CDC5LQ99459 802 aaKnown RBP14.54□□□□□ -0.08
CTSA-209ENST00000493522 MEIS3Q99687 375 aa14.54□□□□□ -0.08
CTSA-209ENST00000493522 ADARB2Q9NS39 739 aaKnown RBP14.54□□□□□ -0.08
CTSA-209ENST00000493522 GPRC5DQ9NZD1 345 aa14.54□□□□□ -0.08
CTSA-209ENST00000493522 DUOX1Q9NRD9 1551 aa14.54□□□□□ -0.08
CTSA-209ENST00000493522 THSD7BQ9C0I4 1608 aa14.53□□□□□ -0.08
CTSA-209ENST00000493522 GRM1Q13255 1194 aa14.53□□□□□ -0.08
CTSA-209ENST00000493522 LMBR1LQ6UX01 489 aa14.53□□□□□ -0.08
CTSA-209ENST00000493522 TMC4Q7Z404 712 aa14.53□□□□□ -0.08
CTSA-209ENST00000493522 BICC1Q9H694 974 aaKnown RBP14.53□□□□□ -0.08
CTSA-209ENST00000493522 ZNRF3Q9ULT6 936 aa14.53□□□□□ -0.08
CTSA-209ENST00000493522 TRAF5O00463 557 aa14.52□□□□□ -0.09
CTSA-209ENST00000493522 BBOX1O75936 387 aa14.52□□□□□ -0.09
CTSA-209ENST00000493522 ITGA6P23229 1130 aa14.52□□□□□ -0.09
CTSA-209ENST00000493522 FMR1Q06787 632 aaKnown RBP eCLIP14.52□□□□□ -0.09
CTSA-209ENST00000493522 CYP4F22Q6NT55 531 aa14.52□□□□□ -0.09
CTSA-209ENST00000493522 DPP8Q6V1X1 898 aaPredicted RBP14.52□□□□□ -0.09
CTSA-209ENST00000493522 ANKRD18AQ8IVF6 992 aa14.52□□□□□ -0.09
CTSA-209ENST00000493522 GPR101Q96P66 508 aaPredicted RBP14.52□□□□□ -0.09
CTSA-209ENST00000493522 RTFDC1Q9BY42 306 aaPredicted RBP14.52□□□□□ -0.09
CTSA-209ENST00000493522 LRRFIP2Q9Y608 721 aaKnown RBP14.52□□□□□ -0.09
CTSA-209ENST00000493522 TLL2Q9Y6L7 1015 aa14.52□□□□□ -0.09
CTSA-209ENST00000493522 ANKRD18BA2A2Z9 1011 aa14.51□□□□□ -0.09
CTSA-209ENST00000493522 CSF1RP07333 972 aa14.51□□□□□ -0.09
CTSA-209ENST00000493522 GNAI3P08754 354 aa14.51□□□□□ -0.09
CTSA-209ENST00000493522 RPS8P62241 208 aaKnown RBP14.51□□□□□ -0.09
CTSA-209ENST00000493522 CXCL9Q07325 125 aa14.51□□□□□ -0.09
CTSA-209ENST00000493522 IFIT5Q13325 482 aaKnown RBP14.51□□□□□ -0.09
CTSA-209ENST00000493522 CST9Q5W186 159 aa14.51□□□□□ -0.09
CTSA-209ENST00000493522 ANKRD44Q8N8A2 993 aa14.51□□□□□ -0.09
CTSA-209ENST00000493522 ABHD8Q96I13 439 aa14.51□□□□□ -0.09
CTSA-209ENST00000493522 KAZALD1Q96I82 304 aa14.51□□□□□ -0.09
CTSA-209ENST00000493522 HDAC5Q9UQL6 1122 aa14.51□□□□□ -0.09
CTSA-209ENST00000493522 IGHMBP2P38935 993 aaKnown RBP14.5□□□□□ -0.09
CTSA-209ENST00000493522 GMPSP49915 693 aaPredicted RBP14.5□□□□□ -0.09
CTSA-209ENST00000493522 KIAA2012Q0VF49 1180 aa14.5□□□□□ -0.09
CTSA-209ENST00000493522 CCDC57Q2TAC2 916 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms