RNA–Protein interactions for RNA: ENST00000493007.1

PITPNB-210, Transcript of phosphatidylinositol transfer protein beta, humanhuman

TSL 3

Gene PITPNB, Length 564 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNB-210ENST00000493007 PRELPP51888 382 aa11.47□□□□□ -0.57
PITPNB-210ENST00000493007 RPS8P62241 208 aaKnown RBP11.47□□□□□ -0.57
PITPNB-210ENST00000493007 FKBP4Q02790 459 aaKnown RBP eCLIP11.47□□□□□ -0.57
PITPNB-210ENST00000493007 GRIPAP1Q4V328 841 aa11.47□□□□□ -0.57
PITPNB-210ENST00000493007 TMC4Q7Z404 712 aa11.47□□□□□ -0.57
PITPNB-210ENST00000493007 SP8Q8IXZ3 490 aa11.47□□□□□ -0.57
PITPNB-210ENST00000493007 SLX4Q8IY92 1834 aa11.46□□□□□ -0.57
PITPNB-210ENST00000493007 ARFGEF1Q9Y6D6 1849 aa11.46□□□□□ -0.57
PITPNB-210ENST00000493007 CSF1RP07333 972 aa11.46□□□□□ -0.57
PITPNB-210ENST00000493007 CCT4P50991 539 aaKnown RBP11.46□□□□□ -0.57
PITPNB-210ENST00000493007 SLC51AQ86UW1 340 aa11.46□□□□□ -0.57
PITPNB-210ENST00000493007 PSMD1Q99460 953 aa11.46□□□□□ -0.57
PITPNB-210ENST00000493007 GREM2Q9H772 168 aa11.46□□□□□ -0.57
PITPNB-210ENST00000493007 UTYO14607 1347 aa11.45□□□□□ -0.58
PITPNB-210ENST00000493007 POTEB2H3BUK9 544 aa11.45□□□□□ -0.58
PITPNB-210ENST00000493007 NBPF7P0C2Y1 421 aaPredicted RBP11.45□□□□□ -0.58
PITPNB-210ENST00000493007 FOXO4P98177 505 aa11.45□□□□□ -0.58
PITPNB-210ENST00000493007 ATF7IPQ6VMQ6 1270 aa11.45□□□□□ -0.58
PITPNB-210ENST00000493007 ANKRD18AQ8IVF6 992 aa11.45□□□□□ -0.58
PITPNB-210ENST00000493007 ZNF784Q8NCA9 323 aaPredicted RBP11.45□□□□□ -0.58
PITPNB-210ENST00000493007 YTHDC1Q96MU7 727 aaKnown RBP11.45□□□□□ -0.58
PITPNB-210ENST00000493007 CDC5LQ99459 802 aaKnown RBP11.45□□□□□ -0.58
PITPNB-210ENST00000493007 USP44Q9H0E7 712 aa11.45□□□□□ -0.58
PITPNB-210ENST00000493007 ZNF277Q9NRM2 450 aaPredicted RBP11.45□□□□□ -0.58
PITPNB-210ENST00000493007 TRIM27P14373 513 aa11.44□□□□□ -0.58
PITPNB-210ENST00000493007 ITGA6P23229 1130 aa11.44□□□□□ -0.58
PITPNB-210ENST00000493007 EPHA10Q5JZY3 1008 aa11.44□□□□□ -0.58
PITPNB-210ENST00000493007 ZKSCAN2Q63HK3 967 aa11.44□□□□□ -0.58
PITPNB-210ENST00000493007 LMBR1LQ6UX01 489 aa11.44□□□□□ -0.58
PITPNB-210ENST00000493007 DPP8Q6V1X1 898 aaPredicted RBP11.44□□□□□ -0.58
PITPNB-210ENST00000493007 MPNDQ8N594 471 aa11.44□□□□□ -0.58
PITPNB-210ENST00000493007 SUCLG2Q96I99 432 aa11.44□□□□□ -0.58
PITPNB-210ENST00000493007 TMEM106CQ9BVX2 250 aa11.44□□□□□ -0.58
PITPNB-210ENST00000493007 CIZ1Q9ULV3 898 aaPredicted RBP11.44□□□□□ -0.58
PITPNB-210ENST00000493007 SNED1Q8TER0 1413 aa11.43□□□□□ -0.58
PITPNB-210ENST00000493007 DDX60Q8IY21 1712 aaKnown RBP11.43□□□□□ -0.58
PITPNB-210ENST00000493007 RTL9Q8NET4 1388 aa11.43□□□□□ -0.58
PITPNB-210ENST00000493007 IARSP41252 1262 aaKnown RBP11.43□□□□□ -0.58
PITPNB-210ENST00000493007 INTS3Q68E01 1043 aaKnown RBP11.43□□□□□ -0.58
PITPNB-210ENST00000493007 CLUAP1Q96AJ1 413 aa11.43□□□□□ -0.58
PITPNB-210ENST00000493007 KAZALD1Q96I82 304 aa11.43□□□□□ -0.58
PITPNB-210ENST00000493007 RTFDC1Q9BY42 306 aaPredicted RBP11.43□□□□□ -0.58
PITPNB-210ENST00000493007 NSFL1CQ9UNZ2 370 aaKnown RBP11.43□□□□□ -0.58
PITPNB-210ENST00000493007 TNNQ9UQP3 1299 aa11.43□□□□□ -0.58
PITPNB-210ENST00000493007 CHMP3Q9Y3E7 222 aa11.43□□□□□ -0.58
PITPNB-210ENST00000493007 ZC3H4Q9UPT8 1303 aaKnown RBP11.42□□□□□ -0.58
PITPNB-210ENST00000493007 ANKRD18BA2A2Z9 1011 aa11.42□□□□□ -0.58
PITPNB-210ENST00000493007 IGHMBP2P38935 993 aaKnown RBP11.42□□□□□ -0.58
PITPNB-210ENST00000493007 IFIT5Q13325 482 aaKnown RBP11.42□□□□□ -0.58
PITPNB-210ENST00000493007 FAM161AQ3B820 660 aa11.42□□□□□ -0.58
PITPNB-210ENST00000493007 SUPT20HQ8NEM7 779 aa11.42□□□□□ -0.58
PITPNB-210ENST00000493007 ZNF526Q8TF50 670 aaPredicted RBP11.42□□□□□ -0.58
PITPNB-210ENST00000493007 BSDC1Q9NW68 430 aaPredicted RBP11.42□□□□□ -0.58
PITPNB-210ENST00000493007 CHD4Q14839 1912 aa11.42□□□□□ -0.58
PITPNB-210ENST00000493007 UBTFL1P0CB47 393 aaPredicted RBP11.41□□□□□ -0.58
PITPNB-210ENST00000493007 GPSM2P81274 684 aa11.41□□□□□ -0.58
PITPNB-210ENST00000493007 CCDC57Q2TAC2 916 aa11.41□□□□□ -0.58
PITPNB-210ENST00000493007 ZNF467Q7Z7K2 595 aaPredicted RBP11.41□□□□□ -0.58
PITPNB-210ENST00000493007 LARGE2Q8N3Y3 721 aa11.41□□□□□ -0.58
PITPNB-210ENST00000493007 JDP2Q8WYK2 163 aa11.41□□□□□ -0.58
PITPNB-210ENST00000493007 OTUD5Q96G74 571 aa11.41□□□□□ -0.58
PITPNB-210ENST00000493007 MPHOSPH8Q99549 860 aa11.41□□□□□ -0.58
PITPNB-210ENST00000493007 VPS33BQ9H267 617 aa11.41□□□□□ -0.58
PITPNB-210ENST00000493007 BICC1Q9H694 974 aaKnown RBP11.41□□□□□ -0.58
PITPNB-210ENST00000493007 GPBP1L1Q9HC44 474 aaPredicted RBP11.41□□□□□ -0.58
PITPNB-210ENST00000493007 PODXL2Q9NZ53 605 aa11.41□□□□□ -0.58
PITPNB-210ENST00000493007 RCAN3Q9UKA8 241 aa11.41□□□□□ -0.58
PITPNB-210ENST00000493007 PCDHB8Q9UN66 801 aa11.41□□□□□ -0.58
PITPNB-210ENST00000493007 LAMB2P55268 1798 aa11.41□□□□□ -0.58
PITPNB-210ENST00000493007 C6orf229H3BNL8 230 aa11.4□□□□□ -0.58
PITPNB-210ENST00000493007 PPIP5K2O43314 1243 aa11.4□□□□□ -0.58
PITPNB-210ENST00000493007 AOC3Q16853 763 aa11.4□□□□□ -0.58
PITPNB-210ENST00000493007 RABL6Q3YEC7 729 aaPredicted RBP11.4□□□□□ -0.58
PITPNB-210ENST00000493007 DPY19L2Q6NUT2 758 aa11.4□□□□□ -0.58
PITPNB-210ENST00000493007 FTSJ3Q8IY81 847 aaKnown RBP11.4□□□□□ -0.58
PITPNB-210ENST00000493007 DZIP1LQ8IYY4 767 aaKnown RBP11.4□□□□□ -0.58
PITPNB-210ENST00000493007 ANKIB1Q9P2G1 1089 aa11.4□□□□□ -0.58
PITPNB-210ENST00000493007 POLLQ9UGP5 575 aa11.4□□□□□ -0.58
PITPNB-210ENST00000493007 MINPP1Q9UNW1 487 aa11.4□□□□□ -0.58
PITPNB-210ENST00000493007 HDAC5Q9UQL6 1122 aa11.4□□□□□ -0.58
PITPNB-210ENST00000493007 COL4A1P02462 1669 aa11.4□□□□□ -0.59
PITPNB-210ENST00000493007 GLTPD2A6NH11 291 aa11.39□□□□□ -0.59
PITPNB-210ENST00000493007 SEC24BO95487 1268 aa11.39□□□□□ -0.59
PITPNB-210ENST00000493007 GNAI3P08754 354 aa11.39□□□□□ -0.59
PITPNB-210ENST00000493007 CHRM1P11229 460 aaPredicted RBP11.39□□□□□ -0.59
PITPNB-210ENST00000493007 KIAA2012Q0VF49 1180 aa11.39□□□□□ -0.59
PITPNB-210ENST00000493007 CACNA1SQ13698 1873 aa11.39□□□□□ -0.59
PITPNB-210ENST00000493007 WASHC4Q2M389 1173 aa11.39□□□□□ -0.59
PITPNB-210ENST00000493007 FER1L6Q2WGJ9 1857 aa11.39□□□□□ -0.59
PITPNB-210ENST00000493007 TAF7LQ5H9L4 462 aa11.39□□□□□ -0.59
PITPNB-210ENST00000493007 TMEM57Q8N5G2 664 aa11.39□□□□□ -0.59
PITPNB-210ENST00000493007 ANKRD44Q8N8A2 993 aa11.39□□□□□ -0.59
PITPNB-210ENST00000493007 TBC1D16Q8TBP0 767 aa11.39□□□□□ -0.59
PITPNB-210ENST00000493007 MEIS3Q99687 375 aa11.39□□□□□ -0.59
PITPNB-210ENST00000493007 GGA1Q9UJY5 639 aa11.39□□□□□ -0.59
PITPNB-210ENST00000493007 XDHP47989 1333 aa11.38□□□□□ -0.59
PITPNB-210ENST00000493007 KDM2BQ8NHM5 1336 aa11.38□□□□□ -0.59
PITPNB-210ENST00000493007 FZD9O00144 591 aa11.38□□□□□ -0.59
PITPNB-210ENST00000493007 ATP2B4P23634 1241 aa11.38□□□□□ -0.59
PITPNB-210ENST00000493007 IER5LQ5T953 404 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms