RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 KANSL3Q9P2N6 904 aa6.71□□□□□ -1.34
CD46-216ENST00000490278 NEURL1BA8MQ27 555 aa6.7□□□□□ -1.34
CD46-216ENST00000490278 POLR3DP05423 398 aaPredicted RBP6.7□□□□□ -1.34
CD46-216ENST00000490278 GPLD1P80108 840 aa6.7□□□□□ -1.34
CD46-216ENST00000490278 TBC1D8BQ0IIM8 1120 aa6.7□□□□□ -1.34
CD46-216ENST00000490278 HYAL2Q12891 473 aa6.7□□□□□ -1.34
CD46-216ENST00000490278 NCAPG2Q86XI2 1143 aa6.7□□□□□ -1.34
CD46-216ENST00000490278 GALNT12Q8IXK2 581 aa6.7□□□□□ -1.34
CD46-216ENST00000490278 TNFRSF25Q93038 417 aa6.7□□□□□ -1.34
CD46-216ENST00000490278 OXCT2Q9BYC2 517 aaPredicted RBP6.7□□□□□ -1.34
CD46-216ENST00000490278 DNAJB12Q9NXW2 375 aaKnown RBP6.7□□□□□ -1.34
CD46-216ENST00000490278 KLF15Q9UIH9 416 aa6.7□□□□□ -1.34
CD46-216ENST00000490278 SALL4Q9UJQ4 1053 aa6.7□□□□□ -1.34
CD46-216ENST00000490278 GGA1Q9UJY5 639 aa6.7□□□□□ -1.34
CD46-216ENST00000490278 KIF4AO95239 1232 aa6.69□□□□□ -1.34
CD46-216ENST00000490278 ADAMTS2O95450 1211 aa6.69□□□□□ -1.34
CD46-216ENST00000490278 EDN3P14138 238 aa6.69□□□□□ -1.34
CD46-216ENST00000490278 FCHSD1Q86WN1 690 aa6.69□□□□□ -1.34
CD46-216ENST00000490278 GOLGA6L1Q8N7Z2 621 aa6.69□□□□□ -1.34
CD46-216ENST00000490278 NSUN5Q96P11 429 aaKnown RBP6.69□□□□□ -1.34
CD46-216ENST00000490278 SETDB2Q96T68 719 aa6.69□□□□□ -1.34
CD46-216ENST00000490278 DUSP9Q99956 384 aaKnown RBP6.69□□□□□ -1.34
CD46-216ENST00000490278 BCL11AQ9H165 835 aa6.69□□□□□ -1.34
CD46-216ENST00000490278 GDF2Q9UK05 429 aaPredicted RBP6.69□□□□□ -1.34
CD46-216ENST00000490278 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.69□□□□□ -1.34
CD46-216ENST00000490278 LOC102724428A0A0B4J2F2 783 aa6.68□□□□□ -1.34
CD46-216ENST00000490278 ADARB2-AS1A8MUL3 147 aa6.68□□□□□ -1.34
CD46-216ENST00000490278 ZBTB42B2RXF5 422 aa6.68□□□□□ -1.34
CD46-216ENST00000490278 RBM25P49756 843 aaKnown RBP6.68□□□□□ -1.34
CD46-216ENST00000490278 SIK1P57059 783 aa6.68□□□□□ -1.34
CD46-216ENST00000490278 XPCQ01831 940 aaPredicted RBP6.68□□□□□ -1.34
CD46-216ENST00000490278 MLLT1Q03111 559 aaPredicted RBP6.68□□□□□ -1.34
CD46-216ENST00000490278 COL13A1Q5TAT6 717 aaPredicted RBP6.68□□□□□ -1.34
CD46-216ENST00000490278 SLCO4C1Q6ZQN7 724 aa6.68□□□□□ -1.34
CD46-216ENST00000490278 ZNF428Q96B54 188 aa6.68□□□□□ -1.34
CD46-216ENST00000490278 SPACA7Q96KW9 195 aa6.68□□□□□ -1.34
CD46-216ENST00000490278 NPHS2Q9NP85 383 aa6.68□□□□□ -1.34
CD46-216ENST00000490278 NLRP2Q9NX02 1062 aa6.68□□□□□ -1.34
CD46-216ENST00000490278 ELOA3CA0A087WX78 387 aaPredicted RBP6.67□□□□□ -1.34
CD46-216ENST00000490278 ELOA3DA6NLF2 546 aaPredicted RBP6.67□□□□□ -1.34
CD46-216ENST00000490278 IRS1P35568 1242 aa6.67□□□□□ -1.34
CD46-216ENST00000490278 ADH7P40394 386 aa6.67□□□□□ -1.34
CD46-216ENST00000490278 ELOA3BQ3SY89 546 aa6.67□□□□□ -1.34
CD46-216ENST00000490278 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.67□□□□□ -1.34
CD46-216ENST00000490278 HFE2Q6ZVN8 426 aa6.67□□□□□ -1.34
CD46-216ENST00000490278 TMEM151AQ8N4L1 468 aa6.67□□□□□ -1.34
CD46-216ENST00000490278 CEP120Q8N960 986 aa6.67□□□□□ -1.34
CD46-216ENST00000490278 ELOA3Q8NG57 546 aa6.67□□□□□ -1.34
CD46-216ENST00000490278 EPS8L3Q8TE67 593 aaKnown RBP6.67□□□□□ -1.34
CD46-216ENST00000490278 ACDQ96AP0 544 aa6.67□□□□□ -1.34
CD46-216ENST00000490278 MDFIQ99750 246 aa6.67□□□□□ -1.34
CD46-216ENST00000490278 PARP2Q9UGN5 583 aa6.67□□□□□ -1.34
CD46-216ENST00000490278 SLC6A14Q9UN76 642 aa6.67□□□□□ -1.34
CD46-216ENST00000490278 J3QW42 95 aa6.66□□□□□ -1.34
CD46-216ENST00000490278 GHRHP01286 108 aa6.66□□□□□ -1.34
CD46-216ENST00000490278 SLURP2P0DP57 97 aa6.66□□□□□ -1.34
CD46-216ENST00000490278 ALAS2P22557 587 aa6.66□□□□□ -1.34
CD46-216ENST00000490278 GNA15P30679 374 aa6.66□□□□□ -1.34
CD46-216ENST00000490278 PEAR1Q5VY43 1037 aaPredicted RBP6.66□□□□□ -1.34
CD46-216ENST00000490278 PI16Q6UXB8 463 aa6.66□□□□□ -1.34
CD46-216ENST00000490278 FAM35AQ86V20 835 aa6.66□□□□□ -1.34
CD46-216ENST00000490278 FRMD6Q96NE9 622 aa6.66□□□□□ -1.34
CD46-216ENST00000490278 RBSNQ9H1K0 784 aa6.66□□□□□ -1.34
CD46-216ENST00000490278 LATS2Q9NRM7 1088 aa6.66□□□□□ -1.34
CD46-216ENST00000490278 SPG7Q9UQ90 795 aa6.66□□□□□ -1.34
CD46-216ENST00000490278 A0A1W2PP55 124 aa6.65□□□□□ -1.34
CD46-216ENST00000490278 UNCXA6NJT0 531 aa6.65□□□□□ -1.34
CD46-216ENST00000490278 GADD45BO75293 160 aaPredicted RBP6.65□□□□□ -1.34
CD46-216ENST00000490278 EPXP11678 715 aa6.65□□□□□ -1.34
CD46-216ENST00000490278 EIF2AK2P19525 551 aaKnown RBP6.65□□□□□ -1.34
CD46-216ENST00000490278 ITGAEP38570 1179 aa6.65□□□□□ -1.34
CD46-216ENST00000490278 DAB2P98082 770 aa6.65□□□□□ -1.34
CD46-216ENST00000490278 PSMD2Q13200 908 aa6.65□□□□□ -1.34
CD46-216ENST00000490278 KIAA0319Q5VV43 1072 aa6.65□□□□□ -1.34
CD46-216ENST00000490278 TMC4Q7Z404 712 aa6.65□□□□□ -1.34
CD46-216ENST00000490278 NPM2Q86SE8 214 aaKnown RBP6.65□□□□□ -1.34
CD46-216ENST00000490278 OSMRQ99650 979 aa6.65□□□□□ -1.34
CD46-216ENST00000490278 RNF19AQ9NV58 838 aa6.65□□□□□ -1.34
CD46-216ENST00000490278 GIPC1O14908 333 aa6.64□□□□□ -1.35
CD46-216ENST00000490278 GDF11O95390 407 aa6.64□□□□□ -1.35
CD46-216ENST00000490278 CPB1P15086 417 aa6.64□□□□□ -1.35
CD46-216ENST00000490278 ACPPP15309 386 aa6.64□□□□□ -1.35
CD46-216ENST00000490278 RASSF7Q02833 373 aa6.64□□□□□ -1.35
CD46-216ENST00000490278 MRRFQ96E11 262 aaKnown RBP6.64□□□□□ -1.35
CD46-216ENST00000490278 ZKSCAN3Q9BRR0 538 aa6.64□□□□□ -1.35
CD46-216ENST00000490278 EHD4Q9H223 541 aa6.64□□□□□ -1.35
CD46-216ENST00000490278 SUV39H2Q9H5I1 410 aa6.64□□□□□ -1.35
CD46-216ENST00000490278 MRS2Q9HD23 443 aa6.64□□□□□ -1.35
CD46-216ENST00000490278 LRRC4BQ9NT99 713 aa6.64□□□□□ -1.35
CD46-216ENST00000490278 DZANK1Q9NVP4 752 aa6.64□□□□□ -1.35
CD46-216ENST00000490278 NAGPAQ9UK23 515 aa6.64□□□□□ -1.35
CD46-216ENST00000490278 SORBS3O60504 671 aa6.63□□□□□ -1.35
CD46-216ENST00000490278 BCRP11274 1271 aa6.63□□□□□ -1.35
CD46-216ENST00000490278 GRM2Q14416 872 aa6.63□□□□□ -1.35
CD46-216ENST00000490278 PERM1Q5SV97 790 aa6.63□□□□□ -1.35
CD46-216ENST00000490278 ELMSAN1Q6PJG2 1045 aa6.63□□□□□ -1.35
CD46-216ENST00000490278 C1orf229Q6ZS94 237 aaPredicted RBP6.63□□□□□ -1.35
CD46-216ENST00000490278 MICALL1Q8N3F8 863 aa6.63□□□□□ -1.35
CD46-216ENST00000490278 GALNT6Q8NCL4 622 aa6.63□□□□□ -1.35
CD46-216ENST00000490278 EDARADDQ8WWZ3 215 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms