RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 GNAI1P63096 354 aa12.12□□□□□ -0.47
SNX17-207ENST00000489402 GPSM2P81274 684 aa12.12□□□□□ -0.47
SNX17-207ENST00000489402 TRIM28Q13263 835 aaKnown RBP12.12□□□□□ -0.47
SNX17-207ENST00000489402 DCAF8Q5TAQ9 597 aa12.12□□□□□ -0.47
SNX17-207ENST00000489402 ABHD8Q96I13 439 aa12.12□□□□□ -0.47
SNX17-207ENST00000489402 ZBTB12Q9Y330 459 aaPredicted RBP12.12□□□□□ -0.47
SNX17-207ENST00000489402 ECE2O60344 883 aa12.11□□□□□ -0.47
SNX17-207ENST00000489402 ZNF853P0CG23 659 aa12.11□□□□□ -0.47
SNX17-207ENST00000489402 ZBTB38Q8NAP3 1195 aaPredicted RBP12.11□□□□□ -0.47
SNX17-207ENST00000489402 CHMP4AQ9BY43 222 aa12.11□□□□□ -0.47
SNX17-207ENST00000489402 SEC31BQ9NQW1 1179 aa12.11□□□□□ -0.47
SNX17-207ENST00000489402 IFT57Q9NWB7 429 aa12.11□□□□□ -0.47
SNX17-207ENST00000489402 POLLQ9UGP5 575 aa12.11□□□□□ -0.47
SNX17-207ENST00000489402 TSKSQ9UJT2 592 aa12.11□□□□□ -0.47
SNX17-207ENST00000489402 APAF1O14727 1248 aa12.1□□□□□ -0.47
SNX17-207ENST00000489402 NPM3O75607 178 aaKnown RBP12.1□□□□□ -0.47
SNX17-207ENST00000489402 BRPF1P55201 1214 aaPredicted RBP12.1□□□□□ -0.47
SNX17-207ENST00000489402 DOK7Q18PE1 504 aa12.1□□□□□ -0.47
SNX17-207ENST00000489402 CCDC152Q4G0S7 254 aa12.1□□□□□ -0.47
SNX17-207ENST00000489402 SAMD7Q7Z3H4 446 aa12.1□□□□□ -0.47
SNX17-207ENST00000489402 USP48Q86UV5 1035 aa12.1□□□□□ -0.47
SNX17-207ENST00000489402 C8orf58Q8NAV2 365 aa12.1□□□□□ -0.47
SNX17-207ENST00000489402 DCPSQ96C86 337 aaKnown RBP12.1□□□□□ -0.47
SNX17-207ENST00000489402 ZIC5Q96T25 663 aa12.1□□□□□ -0.47
SNX17-207ENST00000489402 ZC3H12CQ9C0D7 883 aaKnown RBP12.1□□□□□ -0.47
SNX17-207ENST00000489402 ANKIB1Q9P2G1 1089 aa12.1□□□□□ -0.47
SNX17-207ENST00000489402 UFL1O94874 794 aa12.09□□□□□ -0.47
SNX17-207ENST00000489402 DDX58O95786 925 aaKnown RBP12.09□□□□□ -0.47
SNX17-207ENST00000489402 KCNA4P22459 653 aa12.09□□□□□ -0.47
SNX17-207ENST00000489402 HUNKP57058 714 aa12.09□□□□□ -0.47
SNX17-207ENST00000489402 NOGQ13253 232 aa12.09□□□□□ -0.47
SNX17-207ENST00000489402 TBC1D10BQ4KMP7 808 aaPredicted RBP12.09□□□□□ -0.47
SNX17-207ENST00000489402 KRT26Q7Z3Y9 468 aa12.09□□□□□ -0.47
SNX17-207ENST00000489402 CCDC191Q8NCU4 936 aa12.09□□□□□ -0.47
SNX17-207ENST00000489402 TBC1D16Q8TBP0 767 aa12.09□□□□□ -0.47
SNX17-207ENST00000489402 MYD88Q99836 296 aa12.09□□□□□ -0.47
SNX17-207ENST00000489402 PRKRIP1Q9H875 184 aaPredicted RBP12.09□□□□□ -0.47
SNX17-207ENST00000489402 SCN9AQ15858 1988 aa12.09□□□□□ -0.47
SNX17-207ENST00000489402 RTL9Q8NET4 1388 aa12.08□□□□□ -0.48
SNX17-207ENST00000489402 PDE8AO60658 829 aa12.08□□□□□ -0.48
SNX17-207ENST00000489402 PCCAP05165 728 aaPredicted RBP12.08□□□□□ -0.48
SNX17-207ENST00000489402 KIF4BQ2VIQ3 1234 aa12.08□□□□□ -0.48
SNX17-207ENST00000489402 RBM26Q5T8P6 1007 aaKnown RBP12.08□□□□□ -0.48
SNX17-207ENST00000489402 CCDC30Q5VVM6 783 aa12.08□□□□□ -0.48
SNX17-207ENST00000489402 TSPYL6Q8N831 410 aa12.08□□□□□ -0.48
SNX17-207ENST00000489402 C2orf69Q8N8R5 385 aa12.08□□□□□ -0.48
SNX17-207ENST00000489402 CCDC85AQ96PX6 553 aaPredicted RBP12.08□□□□□ -0.48
SNX17-207ENST00000489402 GBA2Q9HCG7 927 aaPredicted RBP12.08□□□□□ -0.48
SNX17-207ENST00000489402 CWC25Q9NXE8 425 aaPredicted RBP12.08□□□□□ -0.48
SNX17-207ENST00000489402 PODXL2Q9NZ53 605 aa12.08□□□□□ -0.48
SNX17-207ENST00000489402 GGA1Q9UJY5 639 aa12.08□□□□□ -0.48
SNX17-207ENST00000489402 ASTN2O75129 1339 aaPredicted RBP12.08□□□□□ -0.48
SNX17-207ENST00000489402 POLR2AP24928 1970 aaKnown RBP12.07□□□□□ -0.48
SNX17-207ENST00000489402 SULF1Q8IWU6 871 aa12.07□□□□□ -0.48
SNX17-207ENST00000489402 PSME4Q14997 1843 aa12.07□□□□□ -0.48
SNX17-207ENST00000489402 CCDC85CA6NKD9 419 aa12.06□□□□□ -0.48
SNX17-207ENST00000489402 ADM5C9JUS6 153 aa12.06□□□□□ -0.48
SNX17-207ENST00000489402 VIL1P09327 827 aaKnown RBP12.06□□□□□ -0.48
SNX17-207ENST00000489402 RGMBQ6NW40 437 aa12.06□□□□□ -0.48
SNX17-207ENST00000489402 ANKRD18AQ8IVF6 992 aa12.06□□□□□ -0.48
SNX17-207ENST00000489402 METTL22Q9BUU2 404 aaPredicted RBP12.06□□□□□ -0.48
SNX17-207ENST00000489402 GGA3Q9NZ52 723 aa12.06□□□□□ -0.48
SNX17-207ENST00000489402 XDHP47989 1333 aa12.06□□□□□ -0.48
SNX17-207ENST00000489402 MYH3P11055 1940 aa12.05□□□□□ -0.48
SNX17-207ENST00000489402 AGBL3Q8NEM8 1001 aa12.05□□□□□ -0.48
SNX17-207ENST00000489402 CCDC102AQ96A19 550 aa12.05□□□□□ -0.48
SNX17-207ENST00000489402 CDC5LQ99459 802 aaKnown RBP12.05□□□□□ -0.48
SNX17-207ENST00000489402 PCDH10Q9P2E7 1040 aa12.05□□□□□ -0.48
SNX17-207ENST00000489402 SCAF8Q9UPN6 1271 aaKnown RBP12.05□□□□□ -0.48
SNX17-207ENST00000489402 MAP3K2Q9Y2U5 619 aa12.05□□□□□ -0.48
SNX17-207ENST00000489402 CASP8AP2Q9UKL3 1982 aa12.05□□□□□ -0.48
SNX17-207ENST00000489402 SPEF2Q9C093 1822 aa12.04□□□□□ -0.48
SNX17-207ENST00000489402 ZNF609O15014 1411 aa12.04□□□□□ -0.48
SNX17-207ENST00000489402 ATP2B4P23634 1241 aa12.04□□□□□ -0.48
SNX17-207ENST00000489402 NEXNQ0ZGT2 675 aa12.04□□□□□ -0.48
SNX17-207ENST00000489402 RSBN1LQ6PCB5 846 aaPredicted RBP12.04□□□□□ -0.48
SNX17-207ENST00000489402 G2E3Q7L622 706 aa12.04□□□□□ -0.48
SNX17-207ENST00000489402 TSR2Q969E8 191 aaKnown RBP12.04□□□□□ -0.48
SNX17-207ENST00000489402 STK31Q9BXU1 1019 aa12.04□□□□□ -0.48
SNX17-207ENST00000489402 TNRC18O15417 2968 aaPredicted RBP12.04□□□□□ -0.48
SNX17-207ENST00000489402 IGKV5-2P06315 115 aa12.03□□□□□ -0.48
SNX17-207ENST00000489402 ZNF157P51786 506 aaPredicted RBP12.03□□□□□ -0.48
SNX17-207ENST00000489402 CTSWP56202 376 aa12.03□□□□□ -0.48
SNX17-207ENST00000489402 FAM161AQ3B820 660 aa12.03□□□□□ -0.48
SNX17-207ENST00000489402 KSR2Q6VAB6 950 aa12.03□□□□□ -0.48
SNX17-207ENST00000489402 PODNQ7Z5L7 613 aa12.03□□□□□ -0.48
SNX17-207ENST00000489402 MCOLN1Q9GZU1 580 aa12.03□□□□□ -0.48
SNX17-207ENST00000489402 AKAP11Q9UKA4 1901 aa12.02□□□□□ -0.49
SNX17-207ENST00000489402 USP17L3A6NCW0 530 aa12.02□□□□□ -0.49
SNX17-207ENST00000489402 USP17L4A6NCW7 530 aa12.02□□□□□ -0.49
SNX17-207ENST00000489402 FAM155AB1AL88 458 aaPredicted RBP12.02□□□□□ -0.49
SNX17-207ENST00000489402 USP17L8P0C7I0 530 aa12.02□□□□□ -0.49
SNX17-207ENST00000489402 ZNF280AP59817 542 aaPredicted RBP12.02□□□□□ -0.49
SNX17-207ENST00000489402 DGKZQ13574 1117 aa12.02□□□□□ -0.49
SNX17-207ENST00000489402 SCARF1Q14162 830 aa12.02□□□□□ -0.49
SNX17-207ENST00000489402 ANGEL2Q5VTE6 544 aaKnown RBP12.02□□□□□ -0.49
SNX17-207ENST00000489402 USP17L1Q7RTZ2 530 aa12.02□□□□□ -0.49
SNX17-207ENST00000489402 CDCA5Q96FF9 252 aa12.02□□□□□ -0.49
SNX17-207ENST00000489402 MXD3Q9BW11 206 aa12.02□□□□□ -0.49
SNX17-207ENST00000489402 SAGE1Q9NXZ1 904 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms