RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 YDJCA8MPS7 323 aa22.17■■□□□ 1.14
ATG3-205ENST00000488910 RAD17O75943 681 aa22.17■■□□□ 1.14
ATG3-205ENST00000488910 EPS15P42566 896 aa22.17■■□□□ 1.14
ATG3-205ENST00000488910 GPRC5DQ9NZD1 345 aa22.17■■□□□ 1.14
ATG3-205ENST00000488910 PTPRCP08575 1304 aa22.16■■□□□ 1.14
ATG3-205ENST00000488910 UFL1O94874 794 aa22.16■■□□□ 1.14
ATG3-205ENST00000488910 ATP2B4P23634 1241 aa22.16■■□□□ 1.14
ATG3-205ENST00000488910 IGHMBP2P38935 993 aaKnown RBP22.16■■□□□ 1.14
ATG3-205ENST00000488910 SLC4A10Q6U841 1118 aa22.16■■□□□ 1.14
ATG3-205ENST00000488910 USP50Q70EL3 339 aaPredicted RBP22.16■■□□□ 1.14
ATG3-205ENST00000488910 SRCIN1Q9C0H9 1055 aa22.16■■□□□ 1.14
ATG3-205ENST00000488910 MINPP1Q9UNW1 487 aa22.16■■□□□ 1.14
ATG3-205ENST00000488910 GRM8O00222 908 aa22.15■■□□□ 1.14
ATG3-205ENST00000488910 CT47B1P0C2W7 299 aaPredicted RBP22.15■■□□□ 1.14
ATG3-205ENST00000488910 ITGA6P23229 1130 aa22.15■■□□□ 1.14
ATG3-205ENST00000488910 ALDH1L2Q3SY69 923 aa22.15■■□□□ 1.14
ATG3-205ENST00000488910 SSH1Q8WYL5 1049 aa22.15■■□□□ 1.14
ATG3-205ENST00000488910 DBNDD1Q9H9R9 158 aa22.15■■□□□ 1.14
ATG3-205ENST00000488910 C9orf78Q9NZ63 289 aaPredicted RBP22.15■■□□□ 1.14
ATG3-205ENST00000488910 GMPSP49915 693 aaPredicted RBP22.14■■□□□ 1.13
ATG3-205ENST00000488910 HTRA3P83110 453 aa22.14■■□□□ 1.13
ATG3-205ENST00000488910 MIER1Q8N108 512 aa22.14■■□□□ 1.13
ATG3-205ENST00000488910 BCL2L13Q9BXK5 485 aa22.14■■□□□ 1.13
ATG3-205ENST00000488910 ADARB2Q9NS39 739 aaKnown RBP22.14■■□□□ 1.13
ATG3-205ENST00000488910 ADAMTSL1Q8N6G6 1762 aa22.13■■□□□ 1.13
ATG3-205ENST00000488910 G3V3G9 751 aa22.13■■□□□ 1.13
ATG3-205ENST00000488910 ECE2O60344 883 aa22.13■■□□□ 1.13
ATG3-205ENST00000488910 ITGBL1O95965 494 aaPredicted RBP22.13■■□□□ 1.13
ATG3-205ENST00000488910 FOXO4P98177 505 aa22.13■■□□□ 1.13
ATG3-205ENST00000488910 DOK7Q18PE1 504 aa22.13■■□□□ 1.13
ATG3-205ENST00000488910 FAM161AQ3B820 660 aa22.13■■□□□ 1.13
ATG3-205ENST00000488910 DCAF8Q5TAQ9 597 aa22.13■■□□□ 1.13
ATG3-205ENST00000488910 MPHOSPH8Q99549 860 aa22.13■■□□□ 1.13
ATG3-205ENST00000488910 PASKQ96RG2 1323 aa22.12■■□□□ 1.13
ATG3-205ENST00000488910 ANKRD18BA2A2Z9 1011 aa22.12■■□□□ 1.13
ATG3-205ENST00000488910 CNTROBQ8N137 903 aa22.12■■□□□ 1.13
ATG3-205ENST00000488910 DPF2Q92785 391 aa22.12■■□□□ 1.13
ATG3-205ENST00000488910 KLRG1Q96E93 195 aa22.12■■□□□ 1.13
ATG3-205ENST00000488910 GPR101Q96P66 508 aaPredicted RBP22.12■■□□□ 1.13
ATG3-205ENST00000488910 PSMD14O00487 310 aa22.11■■□□□ 1.13
ATG3-205ENST00000488910 IFIT5Q13325 482 aaKnown RBP22.11■■□□□ 1.13
ATG3-205ENST00000488910 ANKRD2Q9GZV1 360 aa22.11■■□□□ 1.13
ATG3-205ENST00000488910 CREBZFQ9NS37 354 aa22.11■■□□□ 1.13
ATG3-205ENST00000488910 LEMD3Q9Y2U8 911 aa22.11■■□□□ 1.13
ATG3-205ENST00000488910 RPS12P25398 132 aaKnown RBP22.1■■□□□ 1.13
ATG3-205ENST00000488910 MAP1SQ66K74 1059 aaPredicted RBP22.1■■□□□ 1.13
ATG3-205ENST00000488910 CNOT7Q9UIV1 285 aaKnown RBP22.1■■□□□ 1.13
ATG3-205ENST00000488910 H7C1D1 291 aa22.09■■□□□ 1.13
ATG3-205ENST00000488910 CCT4P50991 539 aaKnown RBP22.09■■□□□ 1.13
ATG3-205ENST00000488910 LMBR1LQ6UX01 489 aa22.09■■□□□ 1.13
ATG3-205ENST00000488910 VIL1P09327 827 aaKnown RBP22.08■■□□□ 1.13
ATG3-205ENST00000488910 PODNQ7Z5L7 613 aa22.08■■□□□ 1.13
ATG3-205ENST00000488910 KCNQ5Q9NR82 932 aa22.08■■□□□ 1.13
ATG3-205ENST00000488910 SMC4Q9NTJ3 1288 aa22.08■■□□□ 1.13
ATG3-205ENST00000488910 CHMP3Q9Y3E7 222 aa22.08■■□□□ 1.13
ATG3-205ENST00000488910 SPEF2Q9C093 1822 aa22.08■■□□□ 1.12
ATG3-205ENST00000488910 UTYO14607 1347 aa22.07■■□□□ 1.12
ATG3-205ENST00000488910 CCDC57Q2TAC2 916 aa22.07■■□□□ 1.12
ATG3-205ENST00000488910 EPHA10Q5JZY3 1008 aa22.07■■□□□ 1.12
ATG3-205ENST00000488910 ZC3H15Q8WU90 426 aaKnown RBP22.07■■□□□ 1.12
ATG3-205ENST00000488910 ZBTB12Q9Y330 459 aaPredicted RBP22.07■■□□□ 1.12
ATG3-205ENST00000488910 MED23Q9ULK4 1368 aa22.07■■□□□ 1.12
ATG3-205ENST00000488910 BRPF1P55201 1214 aaPredicted RBP22.06■■□□□ 1.12
ATG3-205ENST00000488910 MICALL2Q8IY33 904 aa22.06■■□□□ 1.12
ATG3-205ENST00000488910 PGAP2Q9UHJ9 254 aa22.06■■□□□ 1.12
ATG3-205ENST00000488910 TMEM88BA6NKF7 163 aa22.05■■□□□ 1.12
ATG3-205ENST00000488910 NBPF7P0C2Y1 421 aaPredicted RBP22.05■■□□□ 1.12
ATG3-205ENST00000488910 CHRNDQ07001 517 aa22.05■■□□□ 1.12
ATG3-205ENST00000488910 JMYQ8N9B5 988 aa22.05■■□□□ 1.12
ATG3-205ENST00000488910 ZNF804BA4D1E1 1349 aa22.05■■□□□ 1.12
ATG3-205ENST00000488910 WTIPA6NIX2 430 aaPredicted RBP22.04■■□□□ 1.12
ATG3-205ENST00000488910 SUCLG2Q96I99 432 aa22.04■■□□□ 1.12
ATG3-205ENST00000488910 COA1Q9GZY4 146 aa22.04■■□□□ 1.12
ATG3-205ENST00000488910 SCN9AQ15858 1988 aa22.03■■□□□ 1.12
ATG3-205ENST00000488910 USP17L3A6NCW0 530 aa22.03■■□□□ 1.12
ATG3-205ENST00000488910 USP17L4A6NCW7 530 aa22.03■■□□□ 1.12
ATG3-205ENST00000488910 HIRAP54198 1017 aaPredicted RBP22.03■■□□□ 1.12
ATG3-205ENST00000488910 TAF7LQ5H9L4 462 aa22.03■■□□□ 1.12
ATG3-205ENST00000488910 USP17L1Q7RTZ2 530 aa22.03■■□□□ 1.12
ATG3-205ENST00000488910 AGBL3Q8NEM8 1001 aa22.03■■□□□ 1.12
ATG3-205ENST00000488910 KAZALD1Q96I82 304 aa22.03■■□□□ 1.12
ATG3-205ENST00000488910 KCNJ4P48050 445 aa22.02■■□□□ 1.12
ATG3-205ENST00000488910 RSBN1LQ6PCB5 846 aaPredicted RBP22.02■■□□□ 1.12
ATG3-205ENST00000488910 LDHAL6AQ6ZMR3 332 aa22.02■■□□□ 1.12
ATG3-205ENST00000488910 SHTN1A0MZ66 631 aa22.01■■□□□ 1.11
ATG3-205ENST00000488910 RARSP54136 660 aaKnown RBP22.01■■□□□ 1.11
ATG3-205ENST00000488910 TRPM4Q8TD43 1214 aa22.01■■□□□ 1.11
ATG3-205ENST00000488910 USP44Q9H0E7 712 aa22.01■■□□□ 1.11
ATG3-205ENST00000488910 NOB1Q9ULX3 412 aaKnown RBP22.01■■□□□ 1.11
ATG3-205ENST00000488910 ZNF609O15014 1411 aa22■■□□□ 1.11
ATG3-205ENST00000488910 RABL6Q3YEC7 729 aaPredicted RBP22■■□□□ 1.11
ATG3-205ENST00000488910 SAMD7Q7Z3H4 446 aa22■■□□□ 1.11
ATG3-205ENST00000488910 API5Q9BZZ5 524 aaKnown RBP22■■□□□ 1.11
ATG3-205ENST00000488910 PSME4Q14997 1843 aa21.99■■□□□ 1.11
ATG3-205ENST00000488910 C15orf52Q6ZUT6 534 aaKnown RBP21.99■■□□□ 1.11
ATG3-205ENST00000488910 TXNRD3Q86VQ6 643 aa21.99■■□□□ 1.11
ATG3-205ENST00000488910 ZNF594Q96JF6 807 aaPredicted RBP21.99■■□□□ 1.11
ATG3-205ENST00000488910 BICC1Q9H694 974 aaKnown RBP21.99■■□□□ 1.11
ATG3-205ENST00000488910 CNNM1Q9NRU3 951 aa21.99■■□□□ 1.11
ATG3-205ENST00000488910 TAF5LO75529 589 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms