RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 CCDC158Q5M9N0 1113 aa8.1□□□□□ -1.11
RN7SL561P-201ENST00000488553 ZMYM1Q5SVZ6 1142 aa8.1□□□□□ -1.11
RN7SL561P-201ENST00000488553 VPS53Q5VIR6 699 aa8.1□□□□□ -1.11
RN7SL561P-201ENST00000488553 DDX46Q7L014 1031 aaKnown RBP8.1□□□□□ -1.11
RN7SL561P-201ENST00000488553 ZNF589Q86UQ0 364 aaPredicted RBP8.1□□□□□ -1.11
RN7SL561P-201ENST00000488553 VGLL2Q8N8G2 317 aa8.1□□□□□ -1.11
RN7SL561P-201ENST00000488553 CNNM1Q9NRU3 951 aa8.1□□□□□ -1.11
RN7SL561P-201ENST00000488553 LIMCH1Q9UPQ0 1083 aa8.1□□□□□ -1.11
RN7SL561P-201ENST00000488553 CYP46A1Q9Y6A2 500 aa8.1□□□□□ -1.11
RN7SL561P-201ENST00000488553 NDUFB9Q9Y6M9 179 aa8.1□□□□□ -1.11
RN7SL561P-201ENST00000488553 CNTNAP4Q9C0A0 1308 aa8.09□□□□□ -1.11
RN7SL561P-201ENST00000488553 PDE8BO95263 885 aa8.09□□□□□ -1.11
RN7SL561P-201ENST00000488553 CHGBP05060 677 aa8.09□□□□□ -1.11
RN7SL561P-201ENST00000488553 HCLS1P14317 486 aaPredicted RBP8.09□□□□□ -1.11
RN7SL561P-201ENST00000488553 FGFR2P21802 821 aa8.09□□□□□ -1.11
RN7SL561P-201ENST00000488553 PSMA5P28066 241 aa8.09□□□□□ -1.11
RN7SL561P-201ENST00000488553 ATP2B3Q16720 1220 aa8.09□□□□□ -1.11
RN7SL561P-201ENST00000488553 METTL24Q5JXM2 366 aa8.09□□□□□ -1.11
RN7SL561P-201ENST00000488553 SLC10A5Q5PT55 438 aa8.09□□□□□ -1.11
RN7SL561P-201ENST00000488553 TTC39AQ5SRH9 613 aa8.09□□□□□ -1.11
RN7SL561P-201ENST00000488553 GORABQ5T7V8 394 aa8.09□□□□□ -1.11
RN7SL561P-201ENST00000488553 RNF20Q5VTR2 975 aa8.09□□□□□ -1.11
RN7SL561P-201ENST00000488553 RUFY3Q7L099 469 aa8.09□□□□□ -1.11
RN7SL561P-201ENST00000488553 JAKMIP1Q96N16 626 aaKnown RBP8.09□□□□□ -1.11
RN7SL561P-201ENST00000488553 GBP4Q96PP9 640 aa8.09□□□□□ -1.11
RN7SL561P-201ENST00000488553 SEC62Q99442 399 aaKnown RBP8.09□□□□□ -1.11
RN7SL561P-201ENST00000488553 PDRG1Q9NUG6 133 aa8.09□□□□□ -1.11
RN7SL561P-201ENST00000488553 NIP7Q9Y221 180 aaKnown RBP eCLIP8.09□□□□□ -1.11
RN7SL561P-201ENST00000488553 ZNF652Q9Y2D9 606 aa8.09□□□□□ -1.11
RN7SL561P-201ENST00000488553 ZDHHC9Q9Y397 364 aa8.09□□□□□ -1.11
RN7SL561P-201ENST00000488553 U3KPZ7 1027 aaPredicted RBP8.09□□□□□ -1.11
RN7SL561P-201ENST00000488553 RTL9Q8NET4 1388 aa8.09□□□□□ -1.12
RN7SL561P-201ENST00000488553 ABCC12Q96J65 1359 aa8.09□□□□□ -1.12
RN7SL561P-201ENST00000488553 ZNF831Q5JPB2 1677 aa8.08□□□□□ -1.12
RN7SL561P-201ENST00000488553 MROH5Q6ZUA9 1318 aa8.08□□□□□ -1.12
RN7SL561P-201ENST00000488553 DDX11L8A8MPP1 907 aa8.08□□□□□ -1.12
RN7SL561P-201ENST00000488553 TRAK2O60296 914 aa8.08□□□□□ -1.12
RN7SL561P-201ENST00000488553 CPA1P15085 419 aa8.08□□□□□ -1.12
RN7SL561P-201ENST00000488553 CASTP20810 708 aaKnown RBP8.08□□□□□ -1.12
RN7SL561P-201ENST00000488553 KCNJ4P48050 445 aa8.08□□□□□ -1.12
RN7SL561P-201ENST00000488553 AK2P54819 239 aa8.08□□□□□ -1.12
RN7SL561P-201ENST00000488553 KCNQ4P56696 695 aa8.08□□□□□ -1.12
RN7SL561P-201ENST00000488553 SCARF1Q14162 830 aa8.08□□□□□ -1.12
RN7SL561P-201ENST00000488553 CCDC152Q4G0S7 254 aa8.08□□□□□ -1.12
RN7SL561P-201ENST00000488553 ZSCAN31Q96LW9 406 aaPredicted RBP8.08□□□□□ -1.12
RN7SL561P-201ENST00000488553 BCL2L12Q9HB09 334 aa8.08□□□□□ -1.12
RN7SL561P-201ENST00000488553 HMG20BQ9P0W2 317 aa8.08□□□□□ -1.12
RN7SL561P-201ENST00000488553 AFF2P51816 1311 aa8.07□□□□□ -1.12
RN7SL561P-201ENST00000488553 RIC1Q4ADV7 1423 aa8.07□□□□□ -1.12
RN7SL561P-201ENST00000488553 FAM177BA6PVY3 158 aa8.07□□□□□ -1.12
RN7SL561P-201ENST00000488553 BAG4O95429 457 aaKnown RBP8.07□□□□□ -1.12
RN7SL561P-201ENST00000488553 ZFYP08048 801 aaPredicted RBP8.07□□□□□ -1.12
RN7SL561P-201ENST00000488553 PTMSP20962 102 aa8.07□□□□□ -1.12
RN7SL561P-201ENST00000488553 ZAP70P43403 619 aa8.07□□□□□ -1.12
RN7SL561P-201ENST00000488553 FKBP4Q02790 459 aaKnown RBP eCLIP8.07□□□□□ -1.12
RN7SL561P-201ENST00000488553 PKP1Q13835 747 aa8.07□□□□□ -1.12
RN7SL561P-201ENST00000488553 KRT32Q14532 448 aa8.07□□□□□ -1.12
RN7SL561P-201ENST00000488553 SF3B3Q15393 1217 aaKnown RBP8.07□□□□□ -1.12
RN7SL561P-201ENST00000488553 SKOR2Q2VWA4 1001 aaPredicted RBP8.07□□□□□ -1.12
RN7SL561P-201ENST00000488553 LRRFIP1Q32MZ4 808 aaKnown RBP8.07□□□□□ -1.12
RN7SL561P-201ENST00000488553 MEX3CQ5U5Q3 659 aaKnown RBP8.07□□□□□ -1.12
RN7SL561P-201ENST00000488553 CCDC129Q6ZRS4 1044 aa8.07□□□□□ -1.12
RN7SL561P-201ENST00000488553 LPIN2Q92539 896 aa8.07□□□□□ -1.12
RN7SL561P-201ENST00000488553 DSCC1Q9BVC3 393 aa8.07□□□□□ -1.12
RN7SL561P-201ENST00000488553 SEC31BQ9NQW1 1179 aa8.07□□□□□ -1.12
RN7SL561P-201ENST00000488553 NARFQ9UHQ1 456 aa8.07□□□□□ -1.12
RN7SL561P-201ENST00000488553 TRPC5Q9UL62 973 aaPredicted RBP8.07□□□□□ -1.12
RN7SL561P-201ENST00000488553 TAF6LQ9Y6J9 622 aa8.07□□□□□ -1.12
RN7SL561P-201ENST00000488553 RPAP1Q9BWH6 1393 aaPredicted RBP8.07□□□□□ -1.12
RN7SL561P-201ENST00000488553 ATRNO75882 1429 aa8.06□□□□□ -1.12
RN7SL561P-201ENST00000488553 THSD7AQ9UPZ6 1657 aa8.06□□□□□ -1.12
RN7SL561P-201ENST00000488553 BRD1O95696 1058 aa8.06□□□□□ -1.12
RN7SL561P-201ENST00000488553 UQCRFS1P1P0C7P4 283 aa8.06□□□□□ -1.12
RN7SL561P-201ENST00000488553 RPS6KB1P23443 525 aa8.06□□□□□ -1.12
RN7SL561P-201ENST00000488553 COL9A3Q14050 684 aaPredicted RBP8.06□□□□□ -1.12
RN7SL561P-201ENST00000488553 PUM3Q15397 648 aaKnown RBP8.06□□□□□ -1.12
RN7SL561P-201ENST00000488553 SLFNL1Q499Z3 407 aa8.06□□□□□ -1.12
RN7SL561P-201ENST00000488553 ERFEQ4G0M1 354 aa8.06□□□□□ -1.12
RN7SL561P-201ENST00000488553 FAM182BQ5T319 152 aa8.06□□□□□ -1.12
RN7SL561P-201ENST00000488553 CCDC102BQ68D86 513 aa8.06□□□□□ -1.12
RN7SL561P-201ENST00000488553 NOL8Q76FK4 1167 aaKnown RBP8.06□□□□□ -1.12
RN7SL561P-201ENST00000488553 SEPT12Q8IYM1 358 aa8.06□□□□□ -1.12
RN7SL561P-201ENST00000488553 OSBP2Q969R2 916 aa8.06□□□□□ -1.12
RN7SL561P-201ENST00000488553 SH2B1Q9NRF2 756 aaPredicted RBP8.06□□□□□ -1.12
RN7SL561P-201ENST00000488553 CCNL1Q9UK58 526 aaPredicted RBP8.06□□□□□ -1.12
RN7SL561P-201ENST00000488553 ANKRD36CQ5JPF3 1778 aa8.06□□□□□ -1.12
RN7SL561P-201ENST00000488553 NUP98P52948 1817 aa8.06□□□□□ -1.12
RN7SL561P-201ENST00000488553 AK9Q5TCS8 1911 aa8.05□□□□□ -1.12
RN7SL561P-201ENST00000488553 CYP21A2P08686 494 aa8.05□□□□□ -1.12
RN7SL561P-201ENST00000488553 HSPD1P10809 573 aaKnown RBP8.05□□□□□ -1.12
RN7SL561P-201ENST00000488553 ARID4AP29374 1257 aaPredicted RBP8.05□□□□□ -1.12
RN7SL561P-201ENST00000488553 IGHMBP2P38935 993 aaKnown RBP8.05□□□□□ -1.12
RN7SL561P-201ENST00000488553 MCAMP43121 646 aa8.05□□□□□ -1.12
RN7SL561P-201ENST00000488553 ANKRD1Q15327 319 aa8.05□□□□□ -1.12
RN7SL561P-201ENST00000488553 TTF1Q15361 905 aaPredicted RBP8.05□□□□□ -1.12
RN7SL561P-201ENST00000488553 TBC1D9BQ66K14 1250 aa8.05□□□□□ -1.12
RN7SL561P-201ENST00000488553 BLOC1S2Q6QNY1 142 aa8.05□□□□□ -1.12
RN7SL561P-201ENST00000488553 SMIM5Q71RC9 77 aa8.05□□□□□ -1.12
RN7SL561P-201ENST00000488553 HELBQ8NG08 1087 aaPredicted RBP8.05□□□□□ -1.12
RN7SL561P-201ENST00000488553 ARHGEF1Q92888 912 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms