RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 DCAF5Q96JK2 942 aa16.71■□□□□ 0.26
RER1-207ENST00000488353 FAM227BQ96M60 508 aa16.71■□□□□ 0.26
RER1-207ENST00000488353 SIL1Q9H173 461 aa16.71■□□□□ 0.26
RER1-207ENST00000488353 DACT1Q9NYF0 836 aa16.71■□□□□ 0.26
RER1-207ENST00000488353 TULP2O00295 520 aa16.7■□□□□ 0.26
RER1-207ENST00000488353 NYAP1Q6ZVC0 841 aa16.7■□□□□ 0.26
RER1-207ENST00000488353 TOM1L2Q6ZVM7 507 aa16.7■□□□□ 0.26
RER1-207ENST00000488353 GPATCH3Q96I76 525 aa16.7■□□□□ 0.26
RER1-207ENST00000488353 SUCLG2Q96I99 432 aa16.7■□□□□ 0.26
RER1-207ENST00000488353 USP16Q9Y5T5 823 aa16.7■□□□□ 0.26
RER1-207ENST00000488353 CYP46A1Q9Y6A2 500 aa16.7■□□□□ 0.26
RER1-207ENST00000488353 ERICH4A6NGS2 130 aa16.7■□□□□ 0.26
RER1-207ENST00000488353 MTX1Q13505 466 aa16.7■□□□□ 0.26
RER1-207ENST00000488353 RNF20Q5VTR2 975 aa16.7■□□□□ 0.26
RER1-207ENST00000488353 TTC5Q8N0Z6 440 aa16.7■□□□□ 0.26
RER1-207ENST00000488353 SCAND2PQ9GZW5 306 aaPredicted RBP16.7■□□□□ 0.26
RER1-207ENST00000488353 C5P01031 1676 aa16.69■□□□□ 0.26
RER1-207ENST00000488353 COL9A3Q14050 684 aaPredicted RBP16.69■□□□□ 0.26
RER1-207ENST00000488353 CCDC144BQ3MJ40 725 aa16.69■□□□□ 0.26
RER1-207ENST00000488353 LARP1BQ659C4 914 aaKnown RBP16.69■□□□□ 0.26
RER1-207ENST00000488353 CCDC144CPQ8IYA2 1237 aa16.69■□□□□ 0.26
RER1-207ENST00000488353 ALDH1L1O75891 902 aa16.69■□□□□ 0.26
RER1-207ENST00000488353 BICC1Q9H694 974 aaKnown RBP16.69■□□□□ 0.26
RER1-207ENST00000488353 RBM8AQ9Y5S9 174 aaKnown RBP16.69■□□□□ 0.26
RER1-207ENST00000488353 SOS2Q07890 1332 aaPredicted RBP16.68■□□□□ 0.26
RER1-207ENST00000488353 SASH1O94885 1247 aa16.68■□□□□ 0.26
RER1-207ENST00000488353 CABP4P57796 275 aa16.68■□□□□ 0.26
RER1-207ENST00000488353 NMIQ13287 307 aaPredicted RBP16.68■□□□□ 0.26
RER1-207ENST00000488353 ELF2Q15723 593 aa16.68■□□□□ 0.26
RER1-207ENST00000488353 ME3Q16798 604 aa16.68■□□□□ 0.26
RER1-207ENST00000488353 RIC3Q7Z5B4 369 aa16.68■□□□□ 0.26
RER1-207ENST00000488353 KLHDC4Q8TBB5 520 aa16.68■□□□□ 0.26
RER1-207ENST00000488353 XAGE3Q8WTP9 111 aa16.68■□□□□ 0.26
RER1-207ENST00000488353 EAF2Q96CJ1 260 aaPredicted RBP16.68■□□□□ 0.26
RER1-207ENST00000488353 EVI5LQ96CN4 794 aa16.68■□□□□ 0.26
RER1-207ENST00000488353 TCEANC2Q96MN5 208 aa16.68■□□□□ 0.26
RER1-207ENST00000488353 TSPYL1Q9H0U9 437 aa16.68■□□□□ 0.26
RER1-207ENST00000488353 CLSTN2Q9H4D0 955 aa16.68■□□□□ 0.26
RER1-207ENST00000488353 ZSWIM6Q9HCJ5 1215 aa16.68■□□□□ 0.26
RER1-207ENST00000488353 TLR7Q9NYK1 1049 aaKnown RBP16.68■□□□□ 0.26
RER1-207ENST00000488353 SLU7O95391 586 aaKnown RBP16.68■□□□□ 0.26
RER1-207ENST00000488353 DDX58O95786 925 aaKnown RBP16.68■□□□□ 0.26
RER1-207ENST00000488353 PDCP20941 246 aa16.68■□□□□ 0.26
RER1-207ENST00000488353 G3BP1Q13283 466 aaKnown RBP eCLIP16.68■□□□□ 0.26
RER1-207ENST00000488353 BMS1Q14692 1282 aaKnown RBP16.68■□□□□ 0.26
RER1-207ENST00000488353 COPS6Q7L5N1 327 aa16.68■□□□□ 0.26
RER1-207ENST00000488353 KAZALD1Q96I82 304 aa16.68■□□□□ 0.26
RER1-207ENST00000488353 NOL10Q9BSC4 688 aaKnown RBP16.68■□□□□ 0.26
RER1-207ENST00000488353 BOLA2Q9H3K6 86 aa16.68■□□□□ 0.26
RER1-207ENST00000488353 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.68■□□□□ 0.26
RER1-207ENST00000488353 V9GYY5 206 aaPredicted RBP16.68■□□□□ 0.26
RER1-207ENST00000488353 ST3GAL1Q11201 340 aa16.67■□□□□ 0.26
RER1-207ENST00000488353 NECTIN1Q15223 517 aa16.67■□□□□ 0.26
RER1-207ENST00000488353 ERC1Q8IUD2 1116 aa16.67■□□□□ 0.26
RER1-207ENST00000488353 LINS1Q8NG48 757 aa16.67■□□□□ 0.26
RER1-207ENST00000488353 TM6SF1Q9BZW5 370 aa16.67■□□□□ 0.26
RER1-207ENST00000488353 STRN4Q9NRL3 753 aa16.67■□□□□ 0.26
RER1-207ENST00000488353 KIF2AO00139 706 aaPredicted RBP16.67■□□□□ 0.26
RER1-207ENST00000488353 GRM8O00222 908 aa16.67■□□□□ 0.26
RER1-207ENST00000488353 IGKV5-2P06315 115 aa16.67■□□□□ 0.26
RER1-207ENST00000488353 ZKSCAN1P17029 563 aaPredicted RBP16.67■□□□□ 0.26
RER1-207ENST00000488353 CREB3L3Q68CJ9 461 aa16.67■□□□□ 0.26
RER1-207ENST00000488353 SARM1Q6SZW1 724 aa16.67■□□□□ 0.26
RER1-207ENST00000488353 MRFAP1L1Q96HT8 127 aa16.67■□□□□ 0.26
RER1-207ENST00000488353 BCL11BQ9C0K0 894 aaPredicted RBP16.67■□□□□ 0.26
RER1-207ENST00000488353 WDR17Q8IZU2 1322 aa16.66■□□□□ 0.26
RER1-207ENST00000488353 USP27XA6NNY8 438 aa16.66■□□□□ 0.26
RER1-207ENST00000488353 SKILP12757 684 aa16.66■□□□□ 0.26
RER1-207ENST00000488353 CYP2C19P33261 490 aa16.66■□□□□ 0.26
RER1-207ENST00000488353 DNAJC25Q9H1X3 360 aa16.66■□□□□ 0.26
RER1-207ENST00000488353 GOLGA6L19H0YKK7 550 aa16.65■□□□□ 0.26
RER1-207ENST00000488353 SNRPA1P09661 255 aaKnown RBP16.65■□□□□ 0.26
RER1-207ENST00000488353 SPATA32Q96LK8 384 aa16.65■□□□□ 0.26
RER1-207ENST00000488353 TPCN1Q9ULQ1 816 aa16.65■□□□□ 0.26
RER1-207ENST00000488353 FERMT3Q86UX7 667 aa16.65■□□□□ 0.26
RER1-207ENST00000488353 FAM173BQ6P4H8 233 aa16.64■□□□□ 0.26
RER1-207ENST00000488353 CDC37L1Q7L3B6 337 aa16.64■□□□□ 0.26
RER1-207ENST00000488353 FMNL2Q96PY5 1086 aa16.64■□□□□ 0.26
RER1-207ENST00000488353 MYD88Q99836 296 aa16.64■□□□□ 0.26
RER1-207ENST00000488353 FSD1Q9BTV5 496 aa16.64■□□□□ 0.26
RER1-207ENST00000488353 KCND1Q9NSA2 647 aa16.64■□□□□ 0.26
RER1-207ENST00000488353 ZNF446Q9NWS9 450 aa16.64■□□□□ 0.26
RER1-207ENST00000488353 TAF6LQ9Y6J9 622 aa16.64■□□□□ 0.26
RER1-207ENST00000488353 PKD1L3Q7Z443 1732 aa16.64■□□□□ 0.25
RER1-207ENST00000488353 ABCC6O95255 1503 aa16.64■□□□□ 0.25
RER1-207ENST00000488353 A0A0D9SFI3 127 aa16.64■□□□□ 0.25
RER1-207ENST00000488353 CAPN2P17655 700 aa16.64■□□□□ 0.25
RER1-207ENST00000488353 ZCRB1Q8TBF4 217 aaKnown RBP16.64■□□□□ 0.25
RER1-207ENST00000488353 ST7Q9NRC1 585 aa16.64■□□□□ 0.25
RER1-207ENST00000488353 SLC27A2O14975 620 aa16.63■□□□□ 0.25
RER1-207ENST00000488353 MAP4K1Q92918 833 aa16.63■□□□□ 0.25
RER1-207ENST00000488353 EDC3Q96F86 508 aaKnown RBP16.63■□□□□ 0.25
RER1-207ENST00000488353 COL5A2P05997 1499 aaPredicted RBP16.63■□□□□ 0.25
RER1-207ENST00000488353 MRC1P22897 1456 aa16.63■□□□□ 0.25
RER1-207ENST00000488353 H2AFXP16104 143 aaPredicted RBP16.63■□□□□ 0.25
RER1-207ENST00000488353 LARP1Q6PKG0 1096 aaKnown RBP16.63■□□□□ 0.25
RER1-207ENST00000488353 CCAR2Q8N163 923 aaKnown RBP16.63■□□□□ 0.25
RER1-207ENST00000488353 LEO1Q8WVC0 666 aaPredicted RBP16.63■□□□□ 0.25
RER1-207ENST00000488353 KCNB2Q92953 911 aa16.63■□□□□ 0.25
RER1-207ENST00000488353 NR1I2O75469 434 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms