RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 ILDR2Q71H61 639 aa7.83□□□□□ -1.16
LINC00888-204ENST00000487386 TRIM11Q96F44 468 aa7.83□□□□□ -1.16
LINC00888-204ENST00000487386 BRPF3Q9ULD4 1205 aa7.83□□□□□ -1.16
LINC00888-204ENST00000487386 J3QW42 95 aa7.82□□□□□ -1.16
LINC00888-204ENST00000487386 PIK3R2O00459 728 aa7.82□□□□□ -1.16
LINC00888-204ENST00000487386 CYP2E1P05181 493 aaPredicted RBP7.82□□□□□ -1.16
LINC00888-204ENST00000487386 NID1P14543 1247 aa7.82□□□□□ -1.16
LINC00888-204ENST00000487386 AFF1P51825 1210 aaKnown RBP7.82□□□□□ -1.16
LINC00888-204ENST00000487386 RASSF7Q02833 373 aa7.82□□□□□ -1.16
LINC00888-204ENST00000487386 GRIK5Q16478 980 aa7.82□□□□□ -1.16
LINC00888-204ENST00000487386 HFE2Q6ZVN8 426 aa7.82□□□□□ -1.16
LINC00888-204ENST00000487386 C1orf127Q8N9H9 656 aa7.82□□□□□ -1.16
LINC00888-204ENST00000487386 TTC16Q8NEE8 873 aa7.82□□□□□ -1.16
LINC00888-204ENST00000487386 NSUN5Q96P11 429 aaKnown RBP7.82□□□□□ -1.16
LINC00888-204ENST00000487386 CITED4Q96RK1 184 aa7.82□□□□□ -1.16
LINC00888-204ENST00000487386 CHRDQ9H2X0 955 aa7.82□□□□□ -1.16
LINC00888-204ENST00000487386 SUV39H2Q9H5I1 410 aa7.82□□□□□ -1.16
LINC00888-204ENST00000487386 PATL2C9JE40 543 aaKnown RBP7.81□□□□□ -1.16
LINC00888-204ENST00000487386 LILRB5O75023 590 aa7.81□□□□□ -1.16
LINC00888-204ENST00000487386 TNFRSF21O75509 655 aa7.81□□□□□ -1.16
LINC00888-204ENST00000487386 RGS9O75916 674 aaPredicted RBP7.81□□□□□ -1.16
LINC00888-204ENST00000487386 IGHA2P01877 340 aa7.81□□□□□ -1.16
LINC00888-204ENST00000487386 COL8A1P27658 744 aa7.81□□□□□ -1.16
LINC00888-204ENST00000487386 HYAL2Q12891 473 aa7.81□□□□□ -1.16
LINC00888-204ENST00000487386 NUDT8Q8WV74 236 aa7.81□□□□□ -1.16
LINC00888-204ENST00000487386 FAM129BQ96TA1 746 aa7.81□□□□□ -1.16
LINC00888-204ENST00000487386 JPH1Q9HDC5 661 aaPredicted RBP7.81□□□□□ -1.16
LINC00888-204ENST00000487386 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.81□□□□□ -1.16
LINC00888-204ENST00000487386 NDUFB5O43674 189 aa7.8□□□□□ -1.16
LINC00888-204ENST00000487386 ELMSAN1Q6PJG2 1045 aa7.8□□□□□ -1.16
LINC00888-204ENST00000487386 SALL4Q9UJQ4 1053 aa7.8□□□□□ -1.16
LINC00888-204ENST00000487386 EIF2AK2P19525 551 aaKnown RBP7.79□□□□□ -1.16
LINC00888-204ENST00000487386 CEP120Q8N960 986 aa7.79□□□□□ -1.16
LINC00888-204ENST00000487386 PMEPA1Q969W9 287 aa7.79□□□□□ -1.16
LINC00888-204ENST00000487386 PLVAPQ9BX97 442 aa7.79□□□□□ -1.16
LINC00888-204ENST00000487386 RBCK1Q9BYM8 510 aa7.79□□□□□ -1.16
LINC00888-204ENST00000487386 SMG9Q9H0W8 520 aaKnown RBP7.79□□□□□ -1.16
LINC00888-204ENST00000487386 FOXD3Q9UJU5 478 aaPredicted RBP7.79□□□□□ -1.16
LINC00888-204ENST00000487386 GHRHP01286 108 aa7.78□□□□□ -1.16
LINC00888-204ENST00000487386 CES1P23141 567 aa7.78□□□□□ -1.16
LINC00888-204ENST00000487386 ALYREFQ86V81 257 aaKnown RBP7.78□□□□□ -1.16
LINC00888-204ENST00000487386 KCTD17Q8N5Z5 321 aa7.78□□□□□ -1.16
LINC00888-204ENST00000487386 SNX29Q8TEQ0 813 aa7.78□□□□□ -1.16
LINC00888-204ENST00000487386 PLD4Q96BZ4 506 aa7.78□□□□□ -1.16
LINC00888-204ENST00000487386 NOP53Q9NZM5 478 aaKnown RBP7.78□□□□□ -1.16
LINC00888-204ENST00000487386 GDF11O95390 407 aa7.77□□□□□ -1.17
LINC00888-204ENST00000487386 PDE3BQ13370 1112 aa7.77□□□□□ -1.17
LINC00888-204ENST00000487386 TMEM151AQ8N4L1 468 aa7.77□□□□□ -1.17
LINC00888-204ENST00000487386 DCAF5Q96JK2 942 aa7.77□□□□□ -1.17
LINC00888-204ENST00000487386 ZFYVE28Q9HCC9 887 aa7.77□□□□□ -1.17
LINC00888-204ENST00000487386 KANSL3Q9P2N6 904 aa7.77□□□□□ -1.17
LINC00888-204ENST00000487386 BIN2Q9UBW5 565 aaPredicted RBP7.77□□□□□ -1.17
LINC00888-204ENST00000487386 EREGO14944 169 aa7.76□□□□□ -1.17
LINC00888-204ENST00000487386 PHACTR2O75167 634 aa7.76□□□□□ -1.17
LINC00888-204ENST00000487386 BAG6P46379 1132 aa7.76□□□□□ -1.17
LINC00888-204ENST00000487386 NCAPG2Q86XI2 1143 aa7.76□□□□□ -1.17
LINC00888-204ENST00000487386 AEBP1Q8IUX7 1158 aa7.76□□□□□ -1.17
LINC00888-204ENST00000487386 RBSNQ9H1K0 784 aa7.76□□□□□ -1.17
LINC00888-204ENST00000487386 DCTN4Q9UJW0 460 aa7.76□□□□□ -1.17
LINC00888-204ENST00000487386 NFKBIEO00221 500 aa7.75□□□□□ -1.17
LINC00888-204ENST00000487386 GPR182O15218 404 aa7.75□□□□□ -1.17
LINC00888-204ENST00000487386 ATP11AP98196 1134 aa7.75□□□□□ -1.17
LINC00888-204ENST00000487386 MSL1Q68DK7 614 aa7.75□□□□□ -1.17
LINC00888-204ENST00000487386 SPACA7Q96KW9 195 aa7.75□□□□□ -1.17
LINC00888-204ENST00000487386 PBX4Q9BYU1 374 aa7.75□□□□□ -1.17
LINC00888-204ENST00000487386 RASSF4Q9H2L5 321 aa7.75□□□□□ -1.17
LINC00888-204ENST00000487386 SPDYE3A6NKU9 549 aa7.74□□□□□ -1.17
LINC00888-204ENST00000487386 TMC7Q7Z402 723 aa7.74□□□□□ -1.17
LINC00888-204ENST00000487386 ALKBH8Q96BT7 664 aaKnown RBP7.74□□□□□ -1.17
LINC00888-204ENST00000487386 DMRTB1Q96MA1 342 aa7.74□□□□□ -1.17
LINC00888-204ENST00000487386 KRBA1A5PL33 1030 aa7.73□□□□□ -1.17
LINC00888-204ENST00000487386 NEFLP07196 543 aa7.73□□□□□ -1.17
LINC00888-204ENST00000487386 ACPPP15309 386 aa7.73□□□□□ -1.17
LINC00888-204ENST00000487386 TRAPPC3LQ5T215 181 aa7.73□□□□□ -1.17
LINC00888-204ENST00000487386 ADAMTSL4Q6UY14 1074 aa7.73□□□□□ -1.17
LINC00888-204ENST00000487386 DMRTC2Q8IXT2 367 aaPredicted RBP7.73□□□□□ -1.17
LINC00888-204ENST00000487386 CACTIN-AS1Q8N1I8 211 aa7.73□□□□□ -1.17
LINC00888-204ENST00000487386 DZANK1Q9NVP4 752 aa7.73□□□□□ -1.17
LINC00888-204ENST00000487386 TRIM33Q9UPN9 1127 aa7.73□□□□□ -1.17
LINC00888-204ENST00000487386 AMOTL2Q9Y2J4 779 aa7.73□□□□□ -1.17
LINC00888-204ENST00000487386 A0A0A0MRY4 1105 aa7.72□□□□□ -1.17
LINC00888-204ENST00000487386 SMNDC1O75940 238 aaKnown RBP eCLIP7.72□□□□□ -1.171e-7■□□□□ 11.3
LINC00888-204ENST00000487386 ITGB2P05107 769 aa7.72□□□□□ -1.17
LINC00888-204ENST00000487386 PEAR1Q5VY43 1037 aaPredicted RBP7.72□□□□□ -1.17
LINC00888-204ENST00000487386 CEP135Q66GS9 1140 aa7.72□□□□□ -1.17
LINC00888-204ENST00000487386 POP1Q99575 1024 aaKnown RBP7.72□□□□□ -1.17
LINC00888-204ENST00000487386 NIF3L1Q9GZT8 377 aa7.72□□□□□ -1.17
LINC00888-204ENST00000487386 SPATA31C1P0DKV0 1188 aa7.71□□□□□ -1.18
LINC00888-204ENST00000487386 EDN3P14138 238 aa7.71□□□□□ -1.18
LINC00888-204ENST00000487386 MAPK1P28482 360 aa7.71□□□□□ -1.18
LINC00888-204ENST00000487386 TRIM28Q13263 835 aaKnown RBP7.71□□□□□ -1.18
LINC00888-204ENST00000487386 ORC1Q13415 861 aa7.71□□□□□ -1.18
LINC00888-204ENST00000487386 DSC3Q14574 896 aa7.71□□□□□ -1.18
LINC00888-204ENST00000487386 USPL1Q5W0Q7 1092 aa7.71□□□□□ -1.18
LINC00888-204ENST00000487386 GDF6Q6KF10 455 aaPredicted RBP7.71□□□□□ -1.18
LINC00888-204ENST00000487386 WFDC8Q8IUA0 241 aa7.71□□□□□ -1.18
LINC00888-204ENST00000487386 GALNT12Q8IXK2 581 aa7.71□□□□□ -1.18
LINC00888-204ENST00000487386 DTWD1Q8N5C7 304 aa7.71□□□□□ -1.18
LINC00888-204ENST00000487386 IL22RA1Q8N6P7 574 aa7.71□□□□□ -1.18
LINC00888-204ENST00000487386 TMC1Q8TDI8 760 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms