RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 MPNDQ8N594 471 aa24.13■■□□□ 1.45
PCOLCE-208ENST00000487172 PODXL2Q9NZ53 605 aa24.13■■□□□ 1.45
PCOLCE-208ENST00000487172 LTBP3Q9NS15 1303 aa24.12■■□□□ 1.45
PCOLCE-208ENST00000487172 SLC51AQ86UW1 340 aa24.12■■□□□ 1.45
PCOLCE-208ENST00000487172 KLHDC4Q8TBB5 520 aa24.12■■□□□ 1.45
PCOLCE-208ENST00000487172 PSMD1Q99460 953 aa24.12■■□□□ 1.45
PCOLCE-208ENST00000487172 CNNM1Q9NRU3 951 aa24.12■■□□□ 1.45
PCOLCE-208ENST00000487172 RIPOR2Q9Y4F9 1068 aa24.12■■□□□ 1.45
PCOLCE-208ENST00000487172 EYA2O00167 538 aa24.11■■□□□ 1.45
PCOLCE-208ENST00000487172 NFKBIEO00221 500 aa24.11■■□□□ 1.45
PCOLCE-208ENST00000487172 RTFDC1Q9BY42 306 aaPredicted RBP24.11■■□□□ 1.45
PCOLCE-208ENST00000487172 PUS3Q9BZE2 481 aaKnown RBP24.11■■□□□ 1.45
PCOLCE-208ENST00000487172 ANKRD2Q9GZV1 360 aa24.11■■□□□ 1.45
PCOLCE-208ENST00000487172 NSFL1CQ9UNZ2 370 aaKnown RBP24.11■■□□□ 1.45
PCOLCE-208ENST00000487172 CIAO1O76071 339 aa24.1■■□□□ 1.45
PCOLCE-208ENST00000487172 GPSM2P81274 684 aa24.1■■□□□ 1.45
PCOLCE-208ENST00000487172 FKBP4Q02790 459 aaKnown RBP eCLIP24.1■■□□□ 1.45
PCOLCE-208ENST00000487172 DPP8Q6V1X1 898 aaPredicted RBP24.1■■□□□ 1.45
PCOLCE-208ENST00000487172 EXOC6Q8TAG9 804 aa24.1■■□□□ 1.45
PCOLCE-208ENST00000487172 LTBP1Q14766 1721 aa24.1■■□□□ 1.45
PCOLCE-208ENST00000487172 XDHP47989 1333 aa24.1■■□□□ 1.45
PCOLCE-208ENST00000487172 CHRNDQ07001 517 aa24.09■■□□□ 1.45
PCOLCE-208ENST00000487172 LRRC24Q50LG9 513 aa24.09■■□□□ 1.45
PCOLCE-208ENST00000487172 TAOK3Q9H2K8 898 aa24.09■■□□□ 1.45
PCOLCE-208ENST00000487172 PA2G4Q9UQ80 394 aaKnown RBP24.09■■□□□ 1.45
PCOLCE-208ENST00000487172 MROH5Q6ZUA9 1318 aa24.09■■□□□ 1.45
PCOLCE-208ENST00000487172 HMMRO75330 724 aa24.08■■□□□ 1.45
PCOLCE-208ENST00000487172 SIRT2Q8IXJ6 389 aa24.08■■□□□ 1.45
PCOLCE-208ENST00000487172 SUPT20HQ8NEM7 779 aa24.08■■□□□ 1.45
PCOLCE-208ENST00000487172 VPS33BQ9H267 617 aa24.08■■□□□ 1.45
PCOLCE-208ENST00000487172 ATP2B4P23634 1241 aa24.07■■□□□ 1.44
PCOLCE-208ENST00000487172 IL15P40933 162 aaPredicted RBP24.07■■□□□ 1.44
PCOLCE-208ENST00000487172 ATG9AQ7Z3C6 839 aa24.07■■□□□ 1.44
PCOLCE-208ENST00000487172 ANKIB1Q9P2G1 1089 aa24.07■■□□□ 1.44
PCOLCE-208ENST00000487172 LEMD3Q9Y2U8 911 aa24.07■■□□□ 1.44
PCOLCE-208ENST00000487172 NOP58Q9Y2X3 529 aaKnown RBP24.07■■□□□ 1.44
PCOLCE-208ENST00000487172 TBC1D16Q8TBP0 767 aa24.06■■□□□ 1.44
PCOLCE-208ENST00000487172 PCDHB15Q9Y5E8 787 aa24.06■■□□□ 1.44
PCOLCE-208ENST00000487172 DUOX1Q9NRD9 1551 aa24.06■■□□□ 1.44
PCOLCE-208ENST00000487172 A0A1B0GUL6 1792 aa24.06■■□□□ 1.44
PCOLCE-208ENST00000487172 SBF1O95248 1867 aa24.05■■□□□ 1.44
PCOLCE-208ENST00000487172 IRX6P78412 446 aaPredicted RBP24.05■■□□□ 1.44
PCOLCE-208ENST00000487172 RASSF7Q02833 373 aa24.05■■□□□ 1.44
PCOLCE-208ENST00000487172 SIL1Q9H173 461 aa24.05■■□□□ 1.44
PCOLCE-208ENST00000487172 POLLQ9UGP5 575 aa24.05■■□□□ 1.44
PCOLCE-208ENST00000487172 GGA1Q9UJY5 639 aa24.05■■□□□ 1.44
PCOLCE-208ENST00000487172 G3BP1Q13283 466 aaKnown RBP eCLIP24.04■■□□□ 1.44
PCOLCE-208ENST00000487172 VGLL2Q8N8G2 317 aa24.04■■□□□ 1.44
PCOLCE-208ENST00000487172 C6orf229H3BNL8 230 aa24.03■■□□□ 1.44
PCOLCE-208ENST00000487172 SURF6O75683 361 aaKnown RBP24.03■■□□□ 1.44
PCOLCE-208ENST00000487172 PDE8BO95263 885 aa24.03■■□□□ 1.44
PCOLCE-208ENST00000487172 LMNB1P20700 586 aa24.03■■□□□ 1.44
PCOLCE-208ENST00000487172 PRELPP51888 382 aa24.03■■□□□ 1.44
PCOLCE-208ENST00000487172 METTL24Q5JXM2 366 aa24.03■■□□□ 1.44
PCOLCE-208ENST00000487172 EYA3Q99504 573 aa24.03■■□□□ 1.44
PCOLCE-208ENST00000487172 TAF5LO75529 589 aa24.02■■□□□ 1.44
PCOLCE-208ENST00000487172 UFL1O94874 794 aa24.02■■□□□ 1.44
PCOLCE-208ENST00000487172 IARSP41252 1262 aaKnown RBP24.02■■□□□ 1.44
PCOLCE-208ENST00000487172 HELBQ8NG08 1087 aaPredicted RBP24.02■■□□□ 1.44
PCOLCE-208ENST00000487172 ZNF804BA4D1E1 1349 aa24.02■■□□□ 1.44
PCOLCE-208ENST00000487172 CCDC88AQ3V6T2 1871 aa24.02■■□□□ 1.44
PCOLCE-208ENST00000487172 UBE4AQ14139 1066 aa24.01■■□□□ 1.43
PCOLCE-208ENST00000487172 ZNF277Q9NRM2 450 aaPredicted RBP24.01■■□□□ 1.43
PCOLCE-208ENST00000487172 CEP126Q9P2H0 1117 aa24.01■■□□□ 1.43
PCOLCE-208ENST00000487172 KIAA2012Q0VF49 1180 aa24■■□□□ 1.43
PCOLCE-208ENST00000487172 WASHC4Q2M389 1173 aa24■■□□□ 1.43
PCOLCE-208ENST00000487172 HSP90AB4PQ58FF6 505 aa24■■□□□ 1.43
PCOLCE-208ENST00000487172 C15orf52Q6ZUT6 534 aaKnown RBP24■■□□□ 1.43
PCOLCE-208ENST00000487172 DICER1Q9UPY3 1922 aaKnown RBP24■■□□□ 1.43
PCOLCE-208ENST00000487172 WTIPA6NIX2 430 aaPredicted RBP23.99■■□□□ 1.43
PCOLCE-208ENST00000487172 KCNJ4P48050 445 aa23.99■■□□□ 1.43
PCOLCE-208ENST00000487172 MED23Q9ULK4 1368 aa23.99■■□□□ 1.43
PCOLCE-208ENST00000487172 CHD4Q14839 1912 aa23.98■■□□□ 1.43
PCOLCE-208ENST00000487172 SASH1O94885 1247 aa23.98■■□□□ 1.43
PCOLCE-208ENST00000487172 FGFR2P21802 821 aa23.98■■□□□ 1.43
PCOLCE-208ENST00000487172 ZC3H12CQ9C0D7 883 aaKnown RBP23.98■■□□□ 1.43
PCOLCE-208ENST00000487172 PPIP5K2O43314 1243 aa23.97■■□□□ 1.43
PCOLCE-208ENST00000487172 HDAC1Q13547 482 aaPredicted RBP23.97■■□□□ 1.43
PCOLCE-208ENST00000487172 PUM3Q15397 648 aaKnown RBP23.97■■□□□ 1.43
PCOLCE-208ENST00000487172 C9orf131Q5VYM1 1079 aa23.97■■□□□ 1.43
PCOLCE-208ENST00000487172 ERC1Q8IUD2 1116 aa23.97■■□□□ 1.43
PCOLCE-208ENST00000487172 DCTPP1Q9H773 170 aa23.97■■□□□ 1.43
PCOLCE-208ENST00000487172 IRS2Q9Y4H2 1338 aa23.97■■□□□ 1.43
PCOLCE-208ENST00000487172 SNAP23O00161 211 aa23.96■■□□□ 1.43
PCOLCE-208ENST00000487172 RAB11FIP3O75154 756 aa23.96■■□□□ 1.43
PCOLCE-208ENST00000487172 TFCP2Q12800 502 aa23.96■■□□□ 1.43
PCOLCE-208ENST00000487172 OS9Q13438 667 aaPredicted RBP23.96■■□□□ 1.43
PCOLCE-208ENST00000487172 AOC3Q16853 763 aa23.96■■□□□ 1.43
PCOLCE-208ENST00000487172 LARGE2Q8N3Y3 721 aa23.96■■□□□ 1.43
PCOLCE-208ENST00000487172 GPR108Q9NPR9 543 aa23.96■■□□□ 1.43
PCOLCE-208ENST00000487172 RNF181Q9P0P0 153 aa23.96■■□□□ 1.43
PCOLCE-208ENST00000487172 EXOC6BQ9Y2D4 811 aa23.96■■□□□ 1.43
PCOLCE-208ENST00000487172 JDP2Q8WYK2 163 aa23.95■■□□□ 1.42
PCOLCE-208ENST00000487172 LPIN2Q92539 896 aa23.95■■□□□ 1.42
PCOLCE-208ENST00000487172 GPR101Q96P66 508 aaPredicted RBP23.95■■□□□ 1.42
PCOLCE-208ENST00000487172 AKAP2Q9Y2D5 859 aa23.95■■□□□ 1.42
PCOLCE-208ENST00000487172 ZC3H4Q9UPT8 1303 aaKnown RBP23.94■■□□□ 1.42
PCOLCE-208ENST00000487172 RIMBP2O15034 1052 aa23.94■■□□□ 1.42
PCOLCE-208ENST00000487172 NEFLP07196 543 aa23.94■■□□□ 1.42
PCOLCE-208ENST00000487172 IFIT1P09914 478 aaKnown RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms