RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 GRIPAP1Q4V328 841 aa14.18□□□□□ -0.14
NUP50-216ENST00000486184 LDHAL6AQ6ZMR3 332 aa14.18□□□□□ -0.14
NUP50-216ENST00000486184 SP8Q8IXZ3 490 aa14.18□□□□□ -0.14
NUP50-216ENST00000486184 CNNM1Q9NRU3 951 aa14.18□□□□□ -0.14
NUP50-216ENST00000486184 BSDC1Q9NW68 430 aaPredicted RBP14.18□□□□□ -0.14
NUP50-216ENST00000486184 HMMRO75330 724 aa14.17□□□□□ -0.14
NUP50-216ENST00000486184 NEFLP07196 543 aa14.17□□□□□ -0.14
NUP50-216ENST00000486184 IRX6P78412 446 aaPredicted RBP14.17□□□□□ -0.14
NUP50-216ENST00000486184 MTX1Q13505 466 aa14.17□□□□□ -0.14
NUP50-216ENST00000486184 ARHGAP27Q6ZUM4 889 aa14.17□□□□□ -0.14
NUP50-216ENST00000486184 RTKN2Q8IZC4 609 aa14.17□□□□□ -0.14
NUP50-216ENST00000486184 ZNF594Q96JF6 807 aaPredicted RBP14.17□□□□□ -0.14
NUP50-216ENST00000486184 ANKIB1Q9P2G1 1089 aa14.17□□□□□ -0.14
NUP50-216ENST00000486184 CHD4Q14839 1912 aa14.17□□□□□ -0.14
NUP50-216ENST00000486184 SBF1O95248 1867 aa14.16□□□□□ -0.14
NUP50-216ENST00000486184 ATP8B2P98198 1209 aa14.16□□□□□ -0.14
NUP50-216ENST00000486184 AAMPQ13685 434 aa14.16□□□□□ -0.14
NUP50-216ENST00000486184 CEP85Q6P2H3 762 aa14.16□□□□□ -0.14
NUP50-216ENST00000486184 DPP8Q6V1X1 898 aaPredicted RBP14.16□□□□□ -0.14
NUP50-216ENST00000486184 RPAP2Q8IXW5 612 aaPredicted RBP14.16□□□□□ -0.14
NUP50-216ENST00000486184 MPNDQ8N594 471 aa14.16□□□□□ -0.14
NUP50-216ENST00000486184 DICER1Q9UPY3 1922 aaKnown RBP14.15□□□□□ -0.14
NUP50-216ENST00000486184 SUPT20HQ8NEM7 779 aa14.15□□□□□ -0.14
NUP50-216ENST00000486184 KLHDC4Q8TBB5 520 aa14.15□□□□□ -0.14
NUP50-216ENST00000486184 C7orf43Q8WVR3 580 aa14.15□□□□□ -0.14
NUP50-216ENST00000486184 ANKRD2Q9GZV1 360 aa14.15□□□□□ -0.14
NUP50-216ENST00000486184 SIL1Q9H173 461 aa14.15□□□□□ -0.14
NUP50-216ENST00000486184 TAOK3Q9H2K8 898 aa14.15□□□□□ -0.14
NUP50-216ENST00000486184 NSFL1CQ9UNZ2 370 aaKnown RBP14.15□□□□□ -0.14
NUP50-216ENST00000486184 LTBP1Q14766 1721 aa14.15□□□□□ -0.14
NUP50-216ENST00000486184 XDHP47989 1333 aa14.15□□□□□ -0.15
NUP50-216ENST00000486184 PNMA6EA0A0J9YXQ4 647 aa14.14□□□□□ -0.15
NUP50-216ENST00000486184 KCNJ4P48050 445 aa14.14□□□□□ -0.15
NUP50-216ENST00000486184 OS9Q13438 667 aaPredicted RBP14.14□□□□□ -0.15
NUP50-216ENST00000486184 OLFM4Q6UX06 510 aa14.14□□□□□ -0.15
NUP50-216ENST00000486184 EXOC6Q8TAG9 804 aa14.14□□□□□ -0.15
NUP50-216ENST00000486184 FBXO3Q9UK99 471 aa14.14□□□□□ -0.15
NUP50-216ENST00000486184 MROH5Q6ZUA9 1318 aa14.14□□□□□ -0.15
NUP50-216ENST00000486184 TIAM2Q8IVF5 1701 aa14.13□□□□□ -0.15
NUP50-216ENST00000486184 C6orf229H3BNL8 230 aa14.13□□□□□ -0.15
NUP50-216ENST00000486184 EYA2O00167 538 aa14.13□□□□□ -0.15
NUP50-216ENST00000486184 RFX5P48382 616 aaPredicted RBP14.13□□□□□ -0.15
NUP50-216ENST00000486184 GPSM2P81274 684 aa14.13□□□□□ -0.15
NUP50-216ENST00000486184 FKBP4Q02790 459 aaKnown RBP eCLIP14.13□□□□□ -0.15
NUP50-216ENST00000486184 PTPN12Q05209 780 aaKnown RBP14.13□□□□□ -0.15
NUP50-216ENST00000486184 CHRNDQ07001 517 aa14.13□□□□□ -0.15
NUP50-216ENST00000486184 G3BP1Q13283 466 aaKnown RBP eCLIP14.13□□□□□ -0.15
NUP50-216ENST00000486184 METTL24Q5JXM2 366 aa14.13□□□□□ -0.15
NUP50-216ENST00000486184 SSH3Q8TE77 659 aa14.13□□□□□ -0.15
NUP50-216ENST00000486184 COPRSQ9NQ92 184 aa14.13□□□□□ -0.15
NUP50-216ENST00000486184 MINPP1Q9UNW1 487 aa14.13□□□□□ -0.15
NUP50-216ENST00000486184 CIAO1O76071 339 aa14.12□□□□□ -0.15
NUP50-216ENST00000486184 UFL1O94874 794 aa14.12□□□□□ -0.15
NUP50-216ENST00000486184 PSMD1Q99460 953 aa14.12□□□□□ -0.15
NUP50-216ENST00000486184 EYA3Q99504 573 aa14.12□□□□□ -0.15
NUP50-216ENST00000486184 PUS3Q9BZE2 481 aaKnown RBP14.12□□□□□ -0.15
NUP50-216ENST00000486184 GGA1Q9UJY5 639 aa14.12□□□□□ -0.15
NUP50-216ENST00000486184 PA2G4Q9UQ80 394 aaKnown RBP14.12□□□□□ -0.15
NUP50-216ENST00000486184 LTBP3Q9NS15 1303 aa14.12□□□□□ -0.15
NUP50-216ENST00000486184 SURF6O75683 361 aaKnown RBP14.11□□□□□ -0.15
NUP50-216ENST00000486184 ATP2B4P23634 1241 aa14.11□□□□□ -0.15
NUP50-216ENST00000486184 IL15P40933 162 aaPredicted RBP14.11□□□□□ -0.15
NUP50-216ENST00000486184 RASSF7Q02833 373 aa14.11□□□□□ -0.15
NUP50-216ENST00000486184 LRRC24Q50LG9 513 aa14.11□□□□□ -0.15
NUP50-216ENST00000486184 DUOX1Q9NRD9 1551 aa14.11□□□□□ -0.15
NUP50-216ENST00000486184 PODXL2Q9NZ53 605 aa14.11□□□□□ -0.15
NUP50-216ENST00000486184 MYH13Q9UKX3 1938 aa14.11□□□□□ -0.15
NUP50-216ENST00000486184 G3V3G9 751 aa14.1□□□□□ -0.15
NUP50-216ENST00000486184 NFKBIEO00221 500 aa14.1□□□□□ -0.15
NUP50-216ENST00000486184 HSP90AB4PQ58FF6 505 aa14.1□□□□□ -0.15
NUP50-216ENST00000486184 DCAF8Q5TAQ9 597 aa14.1□□□□□ -0.15
NUP50-216ENST00000486184 SLC51AQ86UW1 340 aa14.1□□□□□ -0.15
NUP50-216ENST00000486184 HELBQ8NG08 1087 aaPredicted RBP14.1□□□□□ -0.15
NUP50-216ENST00000486184 CEP126Q9P2H0 1117 aa14.1□□□□□ -0.15
NUP50-216ENST00000486184 LEMD3Q9Y2U8 911 aa14.1□□□□□ -0.15
NUP50-216ENST00000486184 RIPOR2Q9Y4F9 1068 aa14.1□□□□□ -0.15
NUP50-216ENST00000486184 ARAP2Q8WZ64 1704 aa14.1□□□□□ -0.15
NUP50-216ENST00000486184 SNED1Q8TER0 1413 aa14.09□□□□□ -0.15
NUP50-216ENST00000486184 PPIP5K2O43314 1243 aa14.09□□□□□ -0.15
NUP50-216ENST00000486184 TAF5LO75529 589 aa14.09□□□□□ -0.15
NUP50-216ENST00000486184 LMNB1P20700 586 aa14.09□□□□□ -0.15
NUP50-216ENST00000486184 IARSP41252 1262 aaKnown RBP14.09□□□□□ -0.15
NUP50-216ENST00000486184 WASHC4Q2M389 1173 aa14.09□□□□□ -0.15
NUP50-216ENST00000486184 ERC1Q8IUD2 1116 aa14.09□□□□□ -0.15
NUP50-216ENST00000486184 TBC1D16Q8TBP0 767 aa14.09□□□□□ -0.15
NUP50-216ENST00000486184 ZNF277Q9NRM2 450 aaPredicted RBP14.09□□□□□ -0.15
NUP50-216ENST00000486184 ZBTB12Q9Y330 459 aaPredicted RBP14.09□□□□□ -0.15
NUP50-216ENST00000486184 ZNF804BA4D1E1 1349 aa14.09□□□□□ -0.15
NUP50-216ENST00000486184 ATG9AQ7Z3C6 839 aa14.08□□□□□ -0.16
NUP50-216ENST00000486184 LARGE2Q8N3Y3 721 aa14.08□□□□□ -0.16
NUP50-216ENST00000486184 JDP2Q8WYK2 163 aa14.08□□□□□ -0.16
NUP50-216ENST00000486184 RTFDC1Q9BY42 306 aaPredicted RBP14.08□□□□□ -0.16
NUP50-216ENST00000486184 ZC3H12CQ9C0D7 883 aaKnown RBP14.08□□□□□ -0.16
NUP50-216ENST00000486184 VPS33BQ9H267 617 aa14.08□□□□□ -0.16
NUP50-216ENST00000486184 RNF181Q9P0P0 153 aa14.08□□□□□ -0.16
NUP50-216ENST00000486184 POLLQ9UGP5 575 aa14.08□□□□□ -0.16
NUP50-216ENST00000486184 EXOC6BQ9Y2D4 811 aa14.08□□□□□ -0.16
NUP50-216ENST00000486184 SRCAPQ6ZRS2 3230 aa14.07□□□□□ -0.16
NUP50-216ENST00000486184 RIMBP2O15034 1052 aa14.07□□□□□ -0.16
NUP50-216ENST00000486184 PDE8BO95263 885 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms