RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 NEURL1BA8MQ27 555 aa9.48□□□□□ -0.89
CPNE1-226ENST00000486021 RIMBP2O15034 1052 aa9.48□□□□□ -0.89
CPNE1-226ENST00000486021 ECE2O60344 883 aa9.48□□□□□ -0.89
CPNE1-226ENST00000486021 RAD17O75943 681 aa9.48□□□□□ -0.89
CPNE1-226ENST00000486021 ITGBL1O95965 494 aaPredicted RBP9.48□□□□□ -0.89
CPNE1-226ENST00000486021 EPS15P42566 896 aa9.48□□□□□ -0.89
CPNE1-226ENST00000486021 KCNJ4P48050 445 aa9.48□□□□□ -0.89
CPNE1-226ENST00000486021 GMPSP49915 693 aaPredicted RBP9.48□□□□□ -0.89
CPNE1-226ENST00000486021 TAF7LQ5H9L4 462 aa9.48□□□□□ -0.89
CPNE1-226ENST00000486021 MAP1SQ66K74 1059 aaPredicted RBP9.48□□□□□ -0.89
CPNE1-226ENST00000486021 AGBL3Q8NEM8 1001 aa9.48□□□□□ -0.89
CPNE1-226ENST00000486021 TBC1D16Q8TBP0 767 aa9.48□□□□□ -0.89
CPNE1-226ENST00000486021 PLA2G12BQ9BX93 195 aa9.48□□□□□ -0.89
CPNE1-226ENST00000486021 AKAP11Q9UKA4 1901 aa9.47□□□□□ -0.89
CPNE1-226ENST00000486021 ANKRD18BA2A2Z9 1011 aa9.47□□□□□ -0.89
CPNE1-226ENST00000486021 RASSF10A6NK89 507 aa9.47□□□□□ -0.89
CPNE1-226ENST00000486021 H7C1W4 665 aa9.47□□□□□ -0.89
CPNE1-226ENST00000486021 VAMP4O75379 141 aa9.47□□□□□ -0.89
CPNE1-226ENST00000486021 HSPA1AP0DMV8 641 aaKnown RBP9.47□□□□□ -0.89
CPNE1-226ENST00000486021 HSPA1BP0DMV9 641 aaKnown RBP9.47□□□□□ -0.89
CPNE1-226ENST00000486021 GPSM2P81274 684 aa9.47□□□□□ -0.89
CPNE1-226ENST00000486021 EXOSC9Q06265 439 aaKnown RBP9.47□□□□□ -0.89
CPNE1-226ENST00000486021 GCKRQ14397 625 aa9.47□□□□□ -0.89
CPNE1-226ENST00000486021 PAXIP1Q6ZW49 1069 aaPredicted RBP9.47□□□□□ -0.89
CPNE1-226ENST00000486021 OGFOD1Q8N543 542 aa9.47□□□□□ -0.89
CPNE1-226ENST00000486021 TTLL11Q8NHH1 800 aa9.47□□□□□ -0.89
CPNE1-226ENST00000486021 HHIPL1Q96JK4 782 aa9.47□□□□□ -0.89
CPNE1-226ENST00000486021 DBNDD1Q9H9R9 158 aa9.47□□□□□ -0.89
CPNE1-226ENST00000486021 C9orf78Q9NZ63 289 aaPredicted RBP9.47□□□□□ -0.89
CPNE1-226ENST00000486021 MKRN1Q9UHC7 482 aaKnown RBP9.47□□□□□ -0.89
CPNE1-226ENST00000486021 HDAC9Q9UKV0 1011 aa9.47□□□□□ -0.89
CPNE1-226ENST00000486021 LTBP1Q14766 1721 aa9.47□□□□□ -0.89
CPNE1-226ENST00000486021 E9PSI1 815 aa9.46□□□□□ -0.9
CPNE1-226ENST00000486021 ALDH1L1O75891 902 aa9.46□□□□□ -0.9
CPNE1-226ENST00000486021 POTEIP0CG38 1075 aa9.46□□□□□ -0.9
CPNE1-226ENST00000486021 POTEJP0CG39 1038 aa9.46□□□□□ -0.9
CPNE1-226ENST00000486021 HTRA3P83110 453 aa9.46□□□□□ -0.9
CPNE1-226ENST00000486021 IFIT5Q13325 482 aaKnown RBP9.46□□□□□ -0.9
CPNE1-226ENST00000486021 CCDC57Q2TAC2 916 aa9.46□□□□□ -0.9
CPNE1-226ENST00000486021 CCDC184Q52MB2 194 aa9.46□□□□□ -0.9
CPNE1-226ENST00000486021 UBE3BQ7Z3V4 1068 aa9.46□□□□□ -0.9
CPNE1-226ENST00000486021 MICALL2Q8IY33 904 aa9.46□□□□□ -0.9
CPNE1-226ENST00000486021 COA1Q9GZY4 146 aa9.46□□□□□ -0.9
CPNE1-226ENST00000486021 POLLQ9UGP5 575 aa9.46□□□□□ -0.9
CPNE1-226ENST00000486021 PGAP2Q9UHJ9 254 aa9.46□□□□□ -0.9
CPNE1-226ENST00000486021 ECM29Q5VYK3 1845 aa9.46□□□□□ -0.9
CPNE1-226ENST00000486021 MED23Q9ULK4 1368 aa9.46□□□□□ -0.9
CPNE1-226ENST00000486021 USP17L3A6NCW0 530 aa9.45□□□□□ -0.9
CPNE1-226ENST00000486021 USP17L4A6NCW7 530 aa9.45□□□□□ -0.9
CPNE1-226ENST00000486021 PSMD14O00487 310 aa9.45□□□□□ -0.9
CPNE1-226ENST00000486021 CA12O43570 354 aa9.45□□□□□ -0.9
CPNE1-226ENST00000486021 IGKV5-2P06315 115 aa9.45□□□□□ -0.9
CPNE1-226ENST00000486021 VIL1P09327 827 aaKnown RBP9.45□□□□□ -0.9
CPNE1-226ENST00000486021 ITGA6P23229 1130 aa9.45□□□□□ -0.9
CPNE1-226ENST00000486021 NF2P35240 595 aa9.45□□□□□ -0.9
CPNE1-226ENST00000486021 MAP2K2P36507 400 aa9.45□□□□□ -0.9
CPNE1-226ENST00000486021 CTCFP49711 727 aaPredicted RBP9.45□□□□□ -0.9
CPNE1-226ENST00000486021 CCT4P50991 539 aaKnown RBP9.45□□□□□ -0.9
CPNE1-226ENST00000486021 CWF19L2Q2TBE0 894 aaKnown RBP9.45□□□□□ -0.9
CPNE1-226ENST00000486021 USP17L1Q7RTZ2 530 aa9.45□□□□□ -0.9
CPNE1-226ENST00000486021 SULF1Q8IWU6 871 aa9.45□□□□□ -0.9
CPNE1-226ENST00000486021 REM2Q8IYK8 340 aaPredicted RBP9.45□□□□□ -0.9
CPNE1-226ENST00000486021 C2orf69Q8N8R5 385 aa9.45□□□□□ -0.9
CPNE1-226ENST00000486021 SRCIN1Q9C0H9 1055 aa9.45□□□□□ -0.9
CPNE1-226ENST00000486021 SEC31BQ9NQW1 1179 aa9.45□□□□□ -0.9
CPNE1-226ENST00000486021 CHMP3Q9Y3E7 222 aa9.45□□□□□ -0.9
CPNE1-226ENST00000486021 PTPRCP08575 1304 aa9.45□□□□□ -0.9
CPNE1-226ENST00000486021 WDR33Q9C0J8 1336 aaKnown RBP9.45□□□□□ -0.9
CPNE1-226ENST00000486021 DUOX1Q9NRD9 1551 aa9.45□□□□□ -0.9
CPNE1-226ENST00000486021 CT47B1P0C2W7 299 aaPredicted RBP9.44□□□□□ -0.9
CPNE1-226ENST00000486021 DOK7Q18PE1 504 aa9.44□□□□□ -0.9
CPNE1-226ENST00000486021 RSBN1LQ6PCB5 846 aaPredicted RBP9.44□□□□□ -0.9
CPNE1-226ENST00000486021 CCDC85AQ96PX6 553 aaPredicted RBP9.44□□□□□ -0.9
CPNE1-226ENST00000486021 PRDM10Q9NQV6 1147 aa9.44□□□□□ -0.9
CPNE1-226ENST00000486021 MINPP1Q9UNW1 487 aa9.44□□□□□ -0.9
CPNE1-226ENST00000486021 TLL2Q9Y6L7 1015 aa9.44□□□□□ -0.9
CPNE1-226ENST00000486021 ZNF609O15014 1411 aa9.44□□□□□ -0.9
CPNE1-226ENST00000486021 COL4A5P29400 1685 aa9.44□□□□□ -0.9
CPNE1-226ENST00000486021 PITPNM2Q9BZ72 1349 aa9.43□□□□□ -0.9
CPNE1-226ENST00000486021 YDJCA8MPS7 323 aa9.43□□□□□ -0.9
CPNE1-226ENST00000486021 CCER2I3L3R5 266 aa9.43□□□□□ -0.9
CPNE1-226ENST00000486021 GRM8O00222 908 aa9.43□□□□□ -0.9
CPNE1-226ENST00000486021 MYO1BO43795 1136 aa9.43□□□□□ -0.9
CPNE1-226ENST00000486021 CELF2O95319 508 aaKnown RBP9.43□□□□□ -0.9
CPNE1-226ENST00000486021 CSF1RP07333 972 aa9.43□□□□□ -0.9
CPNE1-226ENST00000486021 USP17L8P0C7I0 530 aa9.43□□□□□ -0.9
CPNE1-226ENST00000486021 VEGFBP49765 207 aa9.43□□□□□ -0.9
CPNE1-226ENST00000486021 KIF4BQ2VIQ3 1234 aa9.43□□□□□ -0.9
CPNE1-226ENST00000486021 STRIP1Q5VSL9 837 aa9.43□□□□□ -0.9
CPNE1-226ENST00000486021 SLC4A10Q6U841 1118 aa9.43□□□□□ -0.9
CPNE1-226ENST00000486021 ZNF804AQ7Z570 1209 aa9.43□□□□□ -0.9
CPNE1-226ENST00000486021 TNS4Q8IZW8 715 aa9.43□□□□□ -0.9
CPNE1-226ENST00000486021 GREM2Q9H772 168 aa9.43□□□□□ -0.9
CPNE1-226ENST00000486021 SCN9AQ15858 1988 aa9.43□□□□□ -0.9
CPNE1-226ENST00000486021 MYH13Q9UKX3 1938 aa9.43□□□□□ -0.9
CPNE1-226ENST00000486021 ZNF804BA4D1E1 1349 aa9.42□□□□□ -0.9
CPNE1-226ENST00000486021 FKBP1BP68106 108 aa9.42□□□□□ -0.9
CPNE1-226ENST00000486021 NOGQ13253 232 aa9.42□□□□□ -0.9
CPNE1-226ENST00000486021 ALDH1L2Q3SY69 923 aa9.42□□□□□ -0.9
CPNE1-226ENST00000486021 RBM26Q5T8P6 1007 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms