RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.47□□□□□ -1.37
FN1-222ENST00000485567 KIF4AO95239 1232 aa6.46□□□□□ -1.38
FN1-222ENST00000485567 XRCC5P13010 732 aaKnown RBP6.46□□□□□ -1.38
FN1-222ENST00000485567 ITGA6P23229 1130 aa6.46□□□□□ -1.38
FN1-222ENST00000485567 GSTT1P30711 240 aa6.46□□□□□ -1.38
FN1-222ENST00000485567 HYAL2Q12891 473 aa6.46□□□□□ -1.38
FN1-222ENST00000485567 PEAR1Q5VY43 1037 aaPredicted RBP6.46□□□□□ -1.38
FN1-222ENST00000485567 PRPF40BQ6NWY9 871 aaKnown RBP6.46□□□□□ -1.38
FN1-222ENST00000485567 KRT25Q7Z3Z0 450 aa6.46□□□□□ -1.38
FN1-222ENST00000485567 SLC43A3Q8NBI5 491 aa6.46□□□□□ -1.38
FN1-222ENST00000485567 GLIS3Q8NEA6 775 aa6.46□□□□□ -1.38
FN1-222ENST00000485567 SREK1Q8WXA9 508 aaKnown RBP6.46□□□□□ -1.38
FN1-222ENST00000485567 ZNF837Q96EG3 531 aaPredicted RBP6.46□□□□□ -1.38
FN1-222ENST00000485567 NFKB1P19838 968 aa6.45□□□□□ -1.38
FN1-222ENST00000485567 PLAURQ03405 335 aa6.45□□□□□ -1.38
FN1-222ENST00000485567 NEUROD1Q13562 356 aa6.45□□□□□ -1.38
FN1-222ENST00000485567 SLC30A3Q99726 388 aa6.45□□□□□ -1.38
FN1-222ENST00000485567 EHD4Q9H223 541 aa6.45□□□□□ -1.38
FN1-222ENST00000485567 CCSER2Q9H7U1 834 aa6.45□□□□□ -1.38
FN1-222ENST00000485567 ZFYVE1Q9HBF4 777 aa6.45□□□□□ -1.38
FN1-222ENST00000485567 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.45□□□□□ -1.38
FN1-222ENST00000485567 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.45□□□□□ -1.38
FN1-222ENST00000485567 NRLP54845 237 aa6.44□□□□□ -1.38
FN1-222ENST00000485567 GRIN2CQ14957 1233 aa6.44□□□□□ -1.38
FN1-222ENST00000485567 SF3A1Q15459 793 aaKnown RBP6.44□□□□□ -1.38
FN1-222ENST00000485567 FOXR1Q6PIV2 292 aa6.44□□□□□ -1.38
FN1-222ENST00000485567 DHX32Q7L7V1 743 aaKnown RBP6.44□□□□□ -1.38
FN1-222ENST00000485567 HS2ST1Q7LGA3 356 aa6.44□□□□□ -1.38
FN1-222ENST00000485567 ZNF654Q8IZM8 581 aa6.44□□□□□ -1.38
FN1-222ENST00000485567 CEP120Q8N960 986 aa6.44□□□□□ -1.38
FN1-222ENST00000485567 C3orf58Q8NDZ4 430 aa6.44□□□□□ -1.38
FN1-222ENST00000485567 GTPBP3Q969Y2 492 aaKnown RBP6.44□□□□□ -1.38
FN1-222ENST00000485567 ABHD17AQ96GS6 310 aa6.44□□□□□ -1.38
FN1-222ENST00000485567 NOC4LQ9BVI4 516 aaKnown RBP6.44□□□□□ -1.38
FN1-222ENST00000485567 KANSL3Q9P2N6 904 aa6.44□□□□□ -1.38
FN1-222ENST00000485567 DDX41Q9UJV9 622 aaKnown RBP6.44□□□□□ -1.38
FN1-222ENST00000485567 TMEM238LA0A1B0GVL6 79 aa6.43□□□□□ -1.38
FN1-222ENST00000485567 CD33P20138 364 aa6.43□□□□□ -1.38
FN1-222ENST00000485567 FGFR3P22607 806 aa6.43□□□□□ -1.38
FN1-222ENST00000485567 MEI1Q5TIA1 1274 aa6.43□□□□□ -1.38
FN1-222ENST00000485567 NCAPG2Q86XI2 1143 aa6.43□□□□□ -1.38
FN1-222ENST00000485567 CCNJLQ8IV13 435 aa6.43□□□□□ -1.38
FN1-222ENST00000485567 TRPM4Q8TD43 1214 aa6.43□□□□□ -1.38
FN1-222ENST00000485567 BHMTQ93088 406 aa6.43□□□□□ -1.38
FN1-222ENST00000485567 TRERF1Q96PN7 1200 aa6.43□□□□□ -1.38
FN1-222ENST00000485567 SRA1Q9HD15 236 aaKnown RBP6.43□□□□□ -1.38
FN1-222ENST00000485567 LATS2Q9NRM7 1088 aa6.43□□□□□ -1.38
FN1-222ENST00000485567 GMPR2Q9P2T1 348 aaKnown RBP6.43□□□□□ -1.38
FN1-222ENST00000485567 GGT7Q9UJ14 662 aa6.43□□□□□ -1.38
FN1-222ENST00000485567 PPM1HQ9ULR3 514 aa6.43□□□□□ -1.38
FN1-222ENST00000485567 GNL2Q13823 731 aaKnown RBP6.42□□□□□ -1.38
FN1-222ENST00000485567 PCSK7Q16549 785 aa6.42□□□□□ -1.38
FN1-222ENST00000485567 COL13A1Q5TAT6 717 aaPredicted RBP6.42□□□□□ -1.38
FN1-222ENST00000485567 ERMP1Q7Z2K6 904 aa6.42□□□□□ -1.38
FN1-222ENST00000485567 NANOS1Q8WY41 292 aaKnown RBP6.42□□□□□ -1.38
FN1-222ENST00000485567 TCF12Q99081 682 aa6.42□□□□□ -1.38
FN1-222ENST00000485567 OSMRQ99650 979 aa6.42□□□□□ -1.38
FN1-222ENST00000485567 TINF2Q9BSI4 451 aa6.42□□□□□ -1.38
FN1-222ENST00000485567 RSRP1Q9BUV0 290 aa6.42□□□□□ -1.38
FN1-222ENST00000485567 IRX2Q9BZI1 471 aaPredicted RBP6.42□□□□□ -1.38
FN1-222ENST00000485567 LIN7BQ9HAP6 207 aa6.42□□□□□ -1.38
FN1-222ENST00000485567 SHROOM4Q9ULL8 1493 aa6.41□□□□□ -1.38
FN1-222ENST00000485567 LOC102724428A0A0B4J2F2 783 aa6.41□□□□□ -1.38
FN1-222ENST00000485567 PPFIA3O75145 1194 aa6.41□□□□□ -1.38
FN1-222ENST00000485567 SIK1P57059 783 aa6.41□□□□□ -1.38
FN1-222ENST00000485567 RACK1P63244 317 aaKnown RBP6.41□□□□□ -1.38
FN1-222ENST00000485567 GPLD1P80108 840 aa6.41□□□□□ -1.38
FN1-222ENST00000485567 CTBSQ01459 385 aa6.41□□□□□ -1.38
FN1-222ENST00000485567 SV2AQ7L0J3 742 aa6.41□□□□□ -1.38
FN1-222ENST00000485567 USP48Q86UV5 1035 aa6.41□□□□□ -1.38
FN1-222ENST00000485567 SPACA7Q96KW9 195 aa6.41□□□□□ -1.38
FN1-222ENST00000485567 CNTNAP3BQ96NU0 1288 aa6.41□□□□□ -1.38
FN1-222ENST00000485567 ZKSCAN3Q9BRR0 538 aa6.41□□□□□ -1.38
FN1-222ENST00000485567 CNTNAP3Q9BZ76 1288 aa6.41□□□□□ -1.38
FN1-222ENST00000485567 BHLHE41Q9C0J9 482 aaPredicted RBP6.41□□□□□ -1.38
FN1-222ENST00000485567 ACBD3Q9H3P7 528 aa6.41□□□□□ -1.38
FN1-222ENST00000485567 ABCB6Q9NP58 842 aa6.41□□□□□ -1.38
FN1-222ENST00000485567 DZANK1Q9NVP4 752 aa6.41□□□□□ -1.38
FN1-222ENST00000485567 LOC105371045A0A1W2PR82 267 aa6.4□□□□□ -1.38
FN1-222ENST00000485567 ZBTB42B2RXF5 422 aa6.4□□□□□ -1.38
FN1-222ENST00000485567 NFKBIEO00221 500 aa6.4□□□□□ -1.38
FN1-222ENST00000485567 SIN3BO75182 1162 aa6.4□□□□□ -1.38
FN1-222ENST00000485567 RLBP1P12271 317 aa6.4□□□□□ -1.38
FN1-222ENST00000485567 SNRPBP14678 240 aaKnown RBP6.4□□□□□ -1.38
FN1-222ENST00000485567 FCGRTP55899 365 aa6.4□□□□□ -1.38
FN1-222ENST00000485567 TMEM102Q8N9M5 508 aaPredicted RBP6.4□□□□□ -1.38
FN1-222ENST00000485567 NXPE3Q969Y0 559 aa6.4□□□□□ -1.38
FN1-222ENST00000485567 GMLQ99445 158 aa6.4□□□□□ -1.38
FN1-222ENST00000485567 OXCT2Q9BYC2 517 aaPredicted RBP6.4□□□□□ -1.38
FN1-222ENST00000485567 CAPN10Q9HC96 672 aa6.4□□□□□ -1.38
FN1-222ENST00000485567 AVENQ9NQS1 362 aaPredicted RBP6.4□□□□□ -1.38
FN1-222ENST00000485567 PRR12Q9ULL5 1215 aa6.4□□□□□ -1.38
FN1-222ENST00000485567 ITPKAP23677 461 aa6.39□□□□□ -1.39
FN1-222ENST00000485567 PWP1Q13610 501 aa6.39□□□□□ -1.39
FN1-222ENST00000485567 ZNF394Q53GI3 561 aa6.39□□□□□ -1.39
FN1-222ENST00000485567 DTHD1Q6ZMT9 781 aa6.39□□□□□ -1.39
FN1-222ENST00000485567 SV2BQ7L1I2 683 aa6.39□□□□□ -1.39
FN1-222ENST00000485567 RAB44Q7Z6P3 723 aaPredicted RBP6.39□□□□□ -1.39
FN1-222ENST00000485567 VWA5B2Q8N398 1253 aa6.39□□□□□ -1.39
FN1-222ENST00000485567 UBXN4Q92575 508 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms