RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 FAM8A1Q9UBU6 413 aa8.35□□□□□ -1.07
SRRM1-213ENST00000485441 NFKB1P19838 968 aa8.34□□□□□ -1.07
SRRM1-213ENST00000485441 CEP120Q8N960 986 aa8.34□□□□□ -1.07
SRRM1-213ENST00000485441 CNTNAP3BQ96NU0 1288 aa8.34□□□□□ -1.07
SRRM1-213ENST00000485441 CNTNAP3Q9BZ76 1288 aa8.34□□□□□ -1.07
SRRM1-213ENST00000485441 ZBTB42B2RXF5 422 aa8.33□□□□□ -1.08
SRRM1-213ENST00000485441 C2CD2LO14523 706 aa8.33□□□□□ -1.08
SRRM1-213ENST00000485441 EDN3P14138 238 aa8.33□□□□□ -1.08
SRRM1-213ENST00000485441 FGFR3P22607 806 aa8.33□□□□□ -1.08
SRRM1-213ENST00000485441 PTPN12Q05209 780 aaKnown RBP8.33□□□□□ -1.08
SRRM1-213ENST00000485441 VWA5B2Q8N398 1253 aa8.33□□□□□ -1.08
SRRM1-213ENST00000485441 RNF34Q969K3 372 aa8.33□□□□□ -1.08
SRRM1-213ENST00000485441 NFKBIEO00221 500 aa8.32□□□□□ -1.08
SRRM1-213ENST00000485441 ZNF76P36508 570 aa8.32□□□□□ -1.08
SRRM1-213ENST00000485441 RAB44Q7Z6P3 723 aaPredicted RBP8.32□□□□□ -1.08
SRRM1-213ENST00000485441 NT5DC4Q86YG4 428 aa8.32□□□□□ -1.08
SRRM1-213ENST00000485441 C3orf58Q8NDZ4 430 aa8.32□□□□□ -1.08
SRRM1-213ENST00000485441 BHMTQ93088 406 aa8.32□□□□□ -1.08
SRRM1-213ENST00000485441 TCF12Q99081 682 aa8.32□□□□□ -1.08
SRRM1-213ENST00000485441 PHF20L1A8MW92 1017 aa8.31□□□□□ -1.08
SRRM1-213ENST00000485441 C11orf95C9JLR9 678 aaPredicted RBP8.31□□□□□ -1.08
SRRM1-213ENST00000485441 GADD45BO75293 160 aaPredicted RBP8.31□□□□□ -1.08
SRRM1-213ENST00000485441 PSAPP07602 524 aa8.31□□□□□ -1.08
SRRM1-213ENST00000485441 USP17L7P0C7H9 530 aa8.31□□□□□ -1.08
SRRM1-213ENST00000485441 ERCC5P28715 1186 aaPredicted RBP8.31□□□□□ -1.08
SRRM1-213ENST00000485441 NRLP54845 237 aa8.31□□□□□ -1.08
SRRM1-213ENST00000485441 PLAURQ03405 335 aa8.31□□□□□ -1.08
SRRM1-213ENST00000485441 TAF1CQ15572 869 aaPredicted RBP8.31□□□□□ -1.08
SRRM1-213ENST00000485441 MEI1Q5TIA1 1274 aa8.31□□□□□ -1.08
SRRM1-213ENST00000485441 PRPF40BQ6NWY9 871 aaKnown RBP8.31□□□□□ -1.08
SRRM1-213ENST00000485441 DHX32Q7L7V1 743 aaKnown RBP8.31□□□□□ -1.08
SRRM1-213ENST00000485441 TRPM4Q8TD43 1214 aa8.31□□□□□ -1.08
SRRM1-213ENST00000485441 PHF24Q9UPV7 400 aa8.31□□□□□ -1.08
SRRM1-213ENST00000485441 GPR25O00155 361 aa8.3□□□□□ -1.08
SRRM1-213ENST00000485441 ACPPP15309 386 aa8.3□□□□□ -1.08
SRRM1-213ENST00000485441 ST13P50502 369 aaKnown RBP8.3□□□□□ -1.08
SRRM1-213ENST00000485441 ZC3H6P61129 1189 aaKnown RBP8.3□□□□□ -1.08
SRRM1-213ENST00000485441 HYAL2Q12891 473 aa8.3□□□□□ -1.08
SRRM1-213ENST00000485441 CCNJLQ8IV13 435 aa8.3□□□□□ -1.08
SRRM1-213ENST00000485441 ANKRD24Q8TF21 1146 aa8.3□□□□□ -1.08
SRRM1-213ENST00000485441 PNMA5Q96PV4 448 aa8.3□□□□□ -1.08
SRRM1-213ENST00000485441 DZANK1Q9NVP4 752 aa8.3□□□□□ -1.08
SRRM1-213ENST00000485441 MAP3K10Q02779 954 aa8.29□□□□□ -1.08
SRRM1-213ENST00000485441 SV2AQ7L0J3 742 aa8.29□□□□□ -1.08
SRRM1-213ENST00000485441 ZKSCAN3Q9BRR0 538 aa8.29□□□□□ -1.08
SRRM1-213ENST00000485441 EHD4Q9H223 541 aa8.29□□□□□ -1.08
SRRM1-213ENST00000485441 ABCB6Q9NP58 842 aa8.29□□□□□ -1.08
SRRM1-213ENST00000485441 KLF15Q9UIH9 416 aa8.29□□□□□ -1.08
SRRM1-213ENST00000485441 TRAK1Q9UPV9 953 aa8.29□□□□□ -1.08
SRRM1-213ENST00000485441 LOC102724428A0A0B4J2F2 783 aa8.28□□□□□ -1.08
SRRM1-213ENST00000485441 TMEM238LA0A1B0GVL6 79 aa8.28□□□□□ -1.08
SRRM1-213ENST00000485441 SIK1P57059 783 aa8.28□□□□□ -1.08
SRRM1-213ENST00000485441 GPLD1P80108 840 aa8.28□□□□□ -1.08
SRRM1-213ENST00000485441 OSMRQ99650 979 aa8.28□□□□□ -1.08
SRRM1-213ENST00000485441 MDFIQ99750 246 aa8.28□□□□□ -1.08
SRRM1-213ENST00000485441 TGIF2Q9GZN2 237 aa8.28□□□□□ -1.08
SRRM1-213ENST00000485441 SRA1Q9HD15 236 aaKnown RBP8.28□□□□□ -1.08
SRRM1-213ENST00000485441 TRPA1O75762 1119 aa8.27□□□□□ -1.09
SRRM1-213ENST00000485441 RACK1P63244 317 aaKnown RBP8.27□□□□□ -1.09
SRRM1-213ENST00000485441 GAS6Q14393 721 aa8.27□□□□□ -1.09
SRRM1-213ENST00000485441 NAALADL2Q58DX5 795 aa8.27□□□□□ -1.09
SRRM1-213ENST00000485441 ZNF468Q5VIY5 522 aaPredicted RBP8.27□□□□□ -1.09
SRRM1-213ENST00000485441 NCAPG2Q86XI2 1143 aa8.27□□□□□ -1.09
SRRM1-213ENST00000485441 NXPE3Q969Y0 559 aa8.27□□□□□ -1.09
SRRM1-213ENST00000485441 TRERF1Q96PN7 1200 aa8.27□□□□□ -1.09
SRRM1-213ENST00000485441 DDX41Q9UJV9 622 aaKnown RBP8.27□□□□□ -1.09
SRRM1-213ENST00000485441 CDC14CA4D256 554 aa8.26□□□□□ -1.09
SRRM1-213ENST00000485441 SIN3BO75182 1162 aa8.26□□□□□ -1.09
SRRM1-213ENST00000485441 GSTT1P30711 240 aa8.26□□□□□ -1.09
SRRM1-213ENST00000485441 FOXR1Q6PIV2 292 aa8.26□□□□□ -1.09
SRRM1-213ENST00000485441 Q6ZNB5 142 aa8.26□□□□□ -1.09
SRRM1-213ENST00000485441 ERMP1Q7Z2K6 904 aa8.26□□□□□ -1.09
SRRM1-213ENST00000485441 SYT9Q86SS6 491 aa8.26□□□□□ -1.09
SRRM1-213ENST00000485441 GPR161Q8N6U8 529 aaKnown RBP8.26□□□□□ -1.09
SRRM1-213ENST00000485441 NSUN5Q96P11 429 aaKnown RBP8.26□□□□□ -1.09
SRRM1-213ENST00000485441 HHIPQ96QV1 700 aa8.26□□□□□ -1.09
SRRM1-213ENST00000485441 BHLHE41Q9C0J9 482 aaPredicted RBP8.26□□□□□ -1.09
SRRM1-213ENST00000485441 LIN7BQ9HAP6 207 aa8.26□□□□□ -1.09
SRRM1-213ENST00000485441 PPP4R2Q9NY27 417 aa8.26□□□□□ -1.09
SRRM1-213ENST00000485441 J3QW42 95 aa8.25□□□□□ -1.09
SRRM1-213ENST00000485441 XRCC5P13010 732 aaKnown RBP8.25□□□□□ -1.09
SRRM1-213ENST00000485441 ITPKAP23677 461 aa8.25□□□□□ -1.09
SRRM1-213ENST00000485441 GRIA4P48058 902 aa8.25□□□□□ -1.09
SRRM1-213ENST00000485441 TMEM102Q8N9M5 508 aaPredicted RBP8.25□□□□□ -1.09
SRRM1-213ENST00000485441 TNFRSF25Q93038 417 aa8.25□□□□□ -1.09
SRRM1-213ENST00000485441 NOC4LQ9BVI4 516 aaKnown RBP8.25□□□□□ -1.09
SRRM1-213ENST00000485441 AVENQ9NQS1 362 aaPredicted RBP8.25□□□□□ -1.09
SRRM1-213ENST00000485441 FCGRTP55899 365 aa8.24□□□□□ -1.09
SRRM1-213ENST00000485441 NEUROD1Q13562 356 aa8.24□□□□□ -1.09
SRRM1-213ENST00000485441 SPRED3Q2MJR0 410 aa8.24□□□□□ -1.09
SRRM1-213ENST00000485441 TINF2Q9BSI4 451 aa8.24□□□□□ -1.09
SRRM1-213ENST00000485441 PBX4Q9BYU1 374 aa8.24□□□□□ -1.09
SRRM1-213ENST00000485441 DNAJB12Q9NXW2 375 aaKnown RBP8.24□□□□□ -1.09
SRRM1-213ENST00000485441 PRR12Q9ULL5 1215 aa8.24□□□□□ -1.09
SRRM1-213ENST00000485441 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.24□□□□□ -1.09
SRRM1-213ENST00000485441 PCBP4P57723 403 aaKnown RBP8.23□□□□□ -1.09
SRRM1-213ENST00000485441 MLLT1Q03111 559 aaPredicted RBP8.23□□□□□ -1.09
SRRM1-213ENST00000485441 ZNF394Q53GI3 561 aa8.23□□□□□ -1.09
SRRM1-213ENST00000485441 HFE2Q6ZVN8 426 aa8.23□□□□□ -1.09
SRRM1-213ENST00000485441 HS2ST1Q7LGA3 356 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms