RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 METTL24Q5JXM2 366 aa12.36□□□□□ -0.43
HDAC6-226ENST00000483656 QSER1Q2KHR3 1735 aa12.35□□□□□ -0.43
HDAC6-226ENST00000483656 ERC2O15083 957 aa12.35□□□□□ -0.43
HDAC6-226ENST00000483656 ATP5JP18859 108 aa12.35□□□□□ -0.43
HDAC6-226ENST00000483656 ADORA1P30542 326 aa12.35□□□□□ -0.43
HDAC6-226ENST00000483656 CELF1Q92879 486 aaKnown RBP12.35□□□□□ -0.43
HDAC6-226ENST00000483656 GPATCH3Q96I76 525 aa12.35□□□□□ -0.43
HDAC6-226ENST00000483656 NEUROD6Q96NK8 337 aa12.35□□□□□ -0.43
HDAC6-226ENST00000483656 TAF1P21675 1872 aa12.35□□□□□ -0.43
HDAC6-226ENST00000483656 MROH5Q6ZUA9 1318 aa12.35□□□□□ -0.43
HDAC6-226ENST00000483656 NRXN2Q9P2S2 1712 aa12.34□□□□□ -0.43
HDAC6-226ENST00000483656 PDE8BO95263 885 aa12.34□□□□□ -0.43
HDAC6-226ENST00000483656 FGFR2P21802 821 aa12.34□□□□□ -0.43
HDAC6-226ENST00000483656 IGHMBP2P38935 993 aaKnown RBP12.34□□□□□ -0.43
HDAC6-226ENST00000483656 CCDC125Q86Z20 511 aa12.34□□□□□ -0.43
HDAC6-226ENST00000483656 HELBQ8NG08 1087 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-226ENST00000483656 RILPL2Q969X0 211 aa12.34□□□□□ -0.43
HDAC6-226ENST00000483656 XAGE2Q96GT9 111 aa12.34□□□□□ -0.43
HDAC6-226ENST00000483656 CDC5LQ99459 802 aaKnown RBP12.34□□□□□ -0.43
HDAC6-226ENST00000483656 MPHOSPH8Q99549 860 aa12.34□□□□□ -0.43
HDAC6-226ENST00000483656 BOLA2Q9H3K6 86 aa12.34□□□□□ -0.43
HDAC6-226ENST00000483656 AKAP2Q9Y2D5 859 aa12.34□□□□□ -0.43
HDAC6-226ENST00000483656 SPEF2Q9C093 1822 aa12.33□□□□□ -0.44
HDAC6-226ENST00000483656 KLRG2A4D1S0 409 aaPredicted RBP12.33□□□□□ -0.44
HDAC6-226ENST00000483656 TRIM6-TRIM34B2RNG4 842 aa12.33□□□□□ -0.44
HDAC6-226ENST00000483656 SNAP23O00161 211 aa12.33□□□□□ -0.44
HDAC6-226ENST00000483656 MMP10P09238 476 aa12.33□□□□□ -0.44
HDAC6-226ENST00000483656 CHMLP26374 656 aa12.33□□□□□ -0.44
HDAC6-226ENST00000483656 RPS8P62241 208 aaKnown RBP12.33□□□□□ -0.44
HDAC6-226ENST00000483656 ATP2B3Q16720 1220 aa12.33□□□□□ -0.44
HDAC6-226ENST00000483656 CRY2Q49AN0 593 aa12.33□□□□□ -0.44
HDAC6-226ENST00000483656 MSL1Q68DK7 614 aa12.33□□□□□ -0.44
HDAC6-226ENST00000483656 ANKRD18AQ8IVF6 992 aa12.33□□□□□ -0.44
HDAC6-226ENST00000483656 PDGFDQ9GZP0 370 aaPredicted RBP12.33□□□□□ -0.44
HDAC6-226ENST00000483656 BSDC1Q9NW68 430 aaPredicted RBP12.33□□□□□ -0.44
HDAC6-226ENST00000483656 NPHP1O15259 732 aa12.32□□□□□ -0.44
HDAC6-226ENST00000483656 TAF5LO75529 589 aa12.32□□□□□ -0.44
HDAC6-226ENST00000483656 ST5P78524 1137 aa12.32□□□□□ -0.44
HDAC6-226ENST00000483656 CHRNDQ07001 517 aa12.32□□□□□ -0.44
HDAC6-226ENST00000483656 MINPP1Q9UNW1 487 aa12.32□□□□□ -0.44
HDAC6-226ENST00000483656 MFAP1P55081 439 aaKnown RBP12.31□□□□□ -0.44
HDAC6-226ENST00000483656 PUM3Q15397 648 aaKnown RBP12.31□□□□□ -0.44
HDAC6-226ENST00000483656 DDX46Q7L014 1031 aaKnown RBP12.31□□□□□ -0.44
HDAC6-226ENST00000483656 SLC51AQ86UW1 340 aa12.31□□□□□ -0.44
HDAC6-226ENST00000483656 CNTROBQ8N137 903 aa12.31□□□□□ -0.44
HDAC6-226ENST00000483656 EVI5LQ96CN4 794 aa12.31□□□□□ -0.44
HDAC6-226ENST00000483656 EDC3Q96F86 508 aaKnown RBP12.31□□□□□ -0.44
HDAC6-226ENST00000483656 HAUS7Q99871 368 aa12.31□□□□□ -0.44
HDAC6-226ENST00000483656 NDUFB9Q9Y6M9 179 aa12.31□□□□□ -0.44
HDAC6-226ENST00000483656 ANKRD31Q8N7Z5 1873 aa12.31□□□□□ -0.44
HDAC6-226ENST00000483656 A0A1B0GUL6 1792 aa12.3□□□□□ -0.44
HDAC6-226ENST00000483656 WTIPA6NIX2 430 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-226ENST00000483656 HOXA10P31260 410 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-226ENST00000483656 GRAPQ13588 217 aa12.3□□□□□ -0.44
HDAC6-226ENST00000483656 GRAPLQ8TC17 118 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-226ENST00000483656 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.3□□□□□ -0.44
HDAC6-226ENST00000483656 LPIN2Q92539 896 aa12.3□□□□□ -0.44
HDAC6-226ENST00000483656 TBC1D32Q96NH3 1257 aa12.3□□□□□ -0.44
HDAC6-226ENST00000483656 BRIP1Q9BX63 1249 aa12.3□□□□□ -0.44
HDAC6-226ENST00000483656 IL25Q9H293 177 aa12.3□□□□□ -0.44
HDAC6-226ENST00000483656 PARP3Q9Y6F1 533 aa12.3□□□□□ -0.44
HDAC6-226ENST00000483656 ARAP2Q8WZ64 1704 aa12.29□□□□□ -0.44
HDAC6-226ENST00000483656 SCARF1Q14162 830 aa12.29□□□□□ -0.44
HDAC6-226ENST00000483656 ESYT1Q9BSJ8 1104 aa12.29□□□□□ -0.44
HDAC6-226ENST00000483656 IFIT1P09914 478 aaKnown RBP12.28□□□□□ -0.44
HDAC6-226ENST00000483656 SLC5A1P13866 664 aa12.28□□□□□ -0.44
HDAC6-226ENST00000483656 YY1P25490 414 aa12.28□□□□□ -0.44
HDAC6-226ENST00000483656 PHKA1P46020 1223 aa12.28□□□□□ -0.44
HDAC6-226ENST00000483656 CCDC158Q5M9N0 1113 aa12.28□□□□□ -0.44
HDAC6-226ENST00000483656 TTC39AQ5SRH9 613 aa12.28□□□□□ -0.44
HDAC6-226ENST00000483656 CCDC102BQ68D86 513 aa12.28□□□□□ -0.44
HDAC6-226ENST00000483656 RPGRQ92834 1020 aaKnown RBP12.28□□□□□ -0.44
HDAC6-226ENST00000483656 ZNF512BQ96KM6 892 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-226ENST00000483656 CRAMP1Q96RY5 1269 aa12.28□□□□□ -0.44
HDAC6-226ENST00000483656 AK9Q5TCS8 1911 aa12.27□□□□□ -0.44
HDAC6-226ENST00000483656 ARID4AP29374 1257 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-226ENST00000483656 UBE4AQ14139 1066 aa12.27□□□□□ -0.45
HDAC6-226ENST00000483656 GORABQ5T7V8 394 aa12.27□□□□□ -0.45
HDAC6-226ENST00000483656 CASC1Q6TDU7 716 aa12.27□□□□□ -0.45
HDAC6-226ENST00000483656 RBM17Q96I25 401 aaKnown RBP12.27□□□□□ -0.45
HDAC6-226ENST00000483656 DNAJC2Q99543 621 aaKnown RBP12.27□□□□□ -0.45
HDAC6-226ENST00000483656 USP26Q9BXU7 913 aa12.27□□□□□ -0.45
HDAC6-226ENST00000483656 C22orf23Q9BZE7 217 aa12.27□□□□□ -0.45
HDAC6-226ENST00000483656 ANTXR1Q9H6X2 564 aa12.27□□□□□ -0.45
HDAC6-226ENST00000483656 SNRKQ9NRH2 765 aa12.27□□□□□ -0.45
HDAC6-226ENST00000483656 GOLIM4O00461 696 aa12.26□□□□□ -0.45
HDAC6-226ENST00000483656 SGSM2O43147 1006 aa12.26□□□□□ -0.45
HDAC6-226ENST00000483656 CHGBP05060 677 aa12.26□□□□□ -0.45
HDAC6-226ENST00000483656 SRGNP10124 158 aa12.26□□□□□ -0.45
HDAC6-226ENST00000483656 MCAMP43121 646 aa12.26□□□□□ -0.45
HDAC6-226ENST00000483656 ZAP70P43403 619 aa12.26□□□□□ -0.45
HDAC6-226ENST00000483656 RBM25P49756 843 aaKnown RBP12.26□□□□□ -0.45
HDAC6-226ENST00000483656 PI16Q6UXB8 463 aa12.26□□□□□ -0.45
HDAC6-226ENST00000483656 ANKRD2Q9GZV1 360 aa12.26□□□□□ -0.45
HDAC6-226ENST00000483656 PAG1Q9NWQ8 432 aa12.26□□□□□ -0.45
HDAC6-226ENST00000483656 IRS2Q9Y4H2 1338 aa12.26□□□□□ -0.45
HDAC6-226ENST00000483656 AKAP11Q9UKA4 1901 aa12.25□□□□□ -0.45
HDAC6-226ENST00000483656 BBOX1O75936 387 aa12.25□□□□□ -0.45
HDAC6-226ENST00000483656 KLRK1P26718 216 aa12.25□□□□□ -0.45
HDAC6-226ENST00000483656 PDE6BP35913 854 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms