RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 ANKIB1Q9P2G1 1089 aa21.33■■□□□ 1.01
RAB11FIP3-209ENST00000483002 PI4KAP2A4QPH2 592 aa21.32■■□□□ 1
RAB11FIP3-209ENST00000483002 CELF2O95319 508 aaKnown RBP21.32■■□□□ 1
RAB11FIP3-209ENST00000483002 CCDC27Q2M243 656 aa21.32■■□□□ 1
RAB11FIP3-209ENST00000483002 CYP4F22Q6NT55 531 aa21.32■■□□□ 1
RAB11FIP3-209ENST00000483002 PI4KAP1Q8N8J0 262 aa21.32■■□□□ 1
RAB11FIP3-209ENST00000483002 DPF2Q92785 391 aa21.32■■□□□ 1
RAB11FIP3-209ENST00000483002 TRPM7Q96QT4 1865 aa21.32■■□□□ 1
RAB11FIP3-209ENST00000483002 G3V3G9 751 aa21.31■■□□□ 1
RAB11FIP3-209ENST00000483002 ECE1P42892 770 aa21.31■■□□□ 1
RAB11FIP3-209ENST00000483002 MAP2K1Q02750 393 aaPredicted RBP21.31■■□□□ 1
RAB11FIP3-209ENST00000483002 DCAF8Q5TAQ9 597 aa21.31■■□□□ 1
RAB11FIP3-209ENST00000483002 SAMD7Q7Z3H4 446 aa21.31■■□□□ 1
RAB11FIP3-209ENST00000483002 PRDM10Q9NQV6 1147 aa21.31■■□□□ 1
RAB11FIP3-209ENST00000483002 PODXL2Q9NZ53 605 aa21.31■■□□□ 1
RAB11FIP3-209ENST00000483002 TLL2Q9Y6L7 1015 aa21.31■■□□□ 1
RAB11FIP3-209ENST00000483002 UFL1O94874 794 aa21.3■■□□□ 1
RAB11FIP3-209ENST00000483002 LBX1P52954 281 aa21.3■■□□□ 1
RAB11FIP3-209ENST00000483002 TWISTNBQ3B726 338 aaPredicted RBP21.3■■□□□ 1
RAB11FIP3-209ENST00000483002 CDC37L1Q7L3B6 337 aa21.3■■□□□ 1
RAB11FIP3-209ENST00000483002 ZNF408Q9H9D4 720 aa21.3■■□□□ 1
RAB11FIP3-209ENST00000483002 IGKV5-2P06315 115 aa21.29■■□□□ 1
RAB11FIP3-209ENST00000483002 NEXNQ0ZGT2 675 aa21.29■■□□□ 1
RAB11FIP3-209ENST00000483002 TBC1D10BQ4KMP7 808 aaPredicted RBP21.29■■□□□ 1
RAB11FIP3-209ENST00000483002 RBM26Q5T8P6 1007 aaKnown RBP21.29■■□□□ 1
RAB11FIP3-209ENST00000483002 ANKRD18AQ8IVF6 992 aa21.29■■□□□ 1
RAB11FIP3-209ENST00000483002 MRS2Q9HD23 443 aa21.29■■□□□ 1
RAB11FIP3-209ENST00000483002 GGA1Q9UJY5 639 aa21.29■■□□□ 1
RAB11FIP3-209ENST00000483002 RTL9Q8NET4 1388 aa21.28■■□□□ 1
RAB11FIP3-209ENST00000483002 SLC4A2P04920 1241 aa21.28■■□□□ 1
RAB11FIP3-209ENST00000483002 G2E3Q7L622 706 aa21.28■■□□□ 1
RAB11FIP3-209ENST00000483002 SAPCD2Q86UD0 394 aa21.28■■□□□ 1
RAB11FIP3-209ENST00000483002 USP48Q86UV5 1035 aa21.28■■□□□ 1
RAB11FIP3-209ENST00000483002 SALL2Q9Y467 1007 aaPredicted RBP21.28■■□□□ 1
RAB11FIP3-209ENST00000483002 RPS12P25398 132 aaKnown RBP21.27■■□□□ 1
RAB11FIP3-209ENST00000483002 CWF19L2Q2TBE0 894 aaKnown RBP21.27■■□□□ 1
RAB11FIP3-209ENST00000483002 EGFRP00533 1210 aa21.26■□□□□ 0.99
RAB11FIP3-209ENST00000483002 CTSWP56202 376 aa21.26■□□□□ 0.99
RAB11FIP3-209ENST00000483002 DLK2Q6UY11 383 aa21.26■□□□□ 0.99
RAB11FIP3-209ENST00000483002 BEGAINQ9BUH8 593 aa21.26■□□□□ 0.99
RAB11FIP3-209ENST00000483002 ANP32CO43423 234 aa21.25■□□□□ 0.99
RAB11FIP3-209ENST00000483002 AOC2O75106 756 aa21.25■□□□□ 0.99
RAB11FIP3-209ENST00000483002 VIL1P09327 827 aaKnown RBP21.25■□□□□ 0.99
RAB11FIP3-209ENST00000483002 HSPA8P11142 646 aaKnown RBP21.25■□□□□ 0.99
RAB11FIP3-209ENST00000483002 TTLL11Q8NHH1 800 aa21.25■□□□□ 0.99
RAB11FIP3-209ENST00000483002 XDHP47989 1333 aa21.25■□□□□ 0.99
RAB11FIP3-209ENST00000483002 IL16Q14005 1332 aa21.25■□□□□ 0.99
RAB11FIP3-209ENST00000483002 NEURL1BA8MQ27 555 aa21.24■□□□□ 0.99
RAB11FIP3-209ENST00000483002 ZEB1P37275 1124 aaPredicted RBP21.24■□□□□ 0.99
RAB11FIP3-209ENST00000483002 CDC5LQ99459 802 aaKnown RBP21.24■□□□□ 0.99
RAB11FIP3-209ENST00000483002 POLR2AP24928 1970 aaKnown RBP21.24■□□□□ 0.99
RAB11FIP3-209ENST00000483002 ATP2B4P23634 1241 aa21.23■□□□□ 0.99
RAB11FIP3-209ENST00000483002 UBE3BQ7Z3V4 1068 aa21.23■□□□□ 0.99
RAB11FIP3-209ENST00000483002 KRT26Q7Z3Y9 468 aa21.23■□□□□ 0.99
RAB11FIP3-209ENST00000483002 DCPSQ96C86 337 aaKnown RBP21.23■□□□□ 0.99
RAB11FIP3-209ENST00000483002 GREM2Q9H772 168 aa21.23■□□□□ 0.99
RAB11FIP3-209ENST00000483002 SCN9AQ15858 1988 aa21.23■□□□□ 0.99
RAB11FIP3-209ENST00000483002 WTIPA6NIX2 430 aaPredicted RBP21.22■□□□□ 0.99
RAB11FIP3-209ENST00000483002 H7C1W4 665 aa21.22■□□□□ 0.99
RAB11FIP3-209ENST00000483002 MAP2K2P36507 400 aa21.22■□□□□ 0.99
RAB11FIP3-209ENST00000483002 NCBP3Q53F19 620 aaKnown RBP21.22■□□□□ 0.99
RAB11FIP3-209ENST00000483002 ZNF316A6NFI3 1004 aaPredicted RBP21.21■□□□□ 0.99
RAB11FIP3-209ENST00000483002 FLIIQ13045 1269 aa21.21■□□□□ 0.99
RAB11FIP3-209ENST00000483002 KIF4BQ2VIQ3 1234 aa21.21■□□□□ 0.99
RAB11FIP3-209ENST00000483002 HHIPL1Q96JK4 782 aa21.21■□□□□ 0.99
RAB11FIP3-209ENST00000483002 BSDC1Q9NW68 430 aaPredicted RBP21.21■□□□□ 0.99
RAB11FIP3-209ENST00000483002 MINPP1Q9UNW1 487 aa21.21■□□□□ 0.99
RAB11FIP3-209ENST00000483002 FKBP5Q13451 457 aaPredicted RBP21.2■□□□□ 0.98
RAB11FIP3-209ENST00000483002 RSBN1LQ6PCB5 846 aaPredicted RBP21.2■□□□□ 0.98
RAB11FIP3-209ENST00000483002 FANCIQ9NVI1 1328 aa21.2■□□□□ 0.98
RAB11FIP3-209ENST00000483002 ADM5C9JUS6 153 aa21.19■□□□□ 0.98
RAB11FIP3-209ENST00000483002 VAMP4O75379 141 aa21.19■□□□□ 0.98
RAB11FIP3-209ENST00000483002 HUNKP57058 714 aa21.19■□□□□ 0.98
RAB11FIP3-209ENST00000483002 GCKRQ14397 625 aa21.19■□□□□ 0.98
RAB11FIP3-209ENST00000483002 WDR63Q8IWG1 891 aa21.19■□□□□ 0.98
RAB11FIP3-209ENST00000483002 AGBL3Q8NEM8 1001 aa21.19■□□□□ 0.98
RAB11FIP3-209ENST00000483002 EXOSC9Q06265 439 aaKnown RBP21.18■□□□□ 0.98
RAB11FIP3-209ENST00000483002 PODNQ7Z5L7 613 aa21.18■□□□□ 0.98
RAB11FIP3-209ENST00000483002 DNAAF4Q8WXU2 420 aa21.18■□□□□ 0.98
RAB11FIP3-209ENST00000483002 TSKSQ9UJT2 592 aa21.18■□□□□ 0.98
RAB11FIP3-209ENST00000483002 ASTN2O75129 1339 aaPredicted RBP21.18■□□□□ 0.98
RAB11FIP3-209ENST00000483002 USP17L3A6NCW0 530 aa21.17■□□□□ 0.98
RAB11FIP3-209ENST00000483002 USP17L4A6NCW7 530 aa21.17■□□□□ 0.98
RAB11FIP3-209ENST00000483002 CCT4P50991 539 aaKnown RBP21.17■□□□□ 0.98
RAB11FIP3-209ENST00000483002 USP17L1Q7RTZ2 530 aa21.17■□□□□ 0.98
RAB11FIP3-209ENST00000483002 SULF1Q8IWU6 871 aa21.17■□□□□ 0.98
RAB11FIP3-209ENST00000483002 C2orf69Q8N8R5 385 aa21.17■□□□□ 0.98
RAB11FIP3-209ENST00000483002 MYH16Q9H6N6 1097 aa21.17■□□□□ 0.98
RAB11FIP3-209ENST00000483002 GBA2Q9HCG7 927 aaPredicted RBP21.17■□□□□ 0.98
RAB11FIP3-209ENST00000483002 GGA3Q9NZ52 723 aa21.17■□□□□ 0.98
RAB11FIP3-209ENST00000483002 MYH3P11055 1940 aa21.17■□□□□ 0.98
RAB11FIP3-209ENST00000483002 USP17L8P0C7I0 530 aa21.16■□□□□ 0.98
RAB11FIP3-209ENST00000483002 IGHMBP2P38935 993 aaKnown RBP21.16■□□□□ 0.98
RAB11FIP3-209ENST00000483002 ZNF280AP59817 542 aaPredicted RBP21.16■□□□□ 0.98
RAB11FIP3-209ENST00000483002 SCARF1Q14162 830 aa21.16■□□□□ 0.98
RAB11FIP3-209ENST00000483002 LINS1Q8NG48 757 aa21.16■□□□□ 0.98
RAB11FIP3-209ENST00000483002 THSD7BQ9C0I4 1608 aa21.15■□□□□ 0.98
RAB11FIP3-209ENST00000483002 ITGA6P23229 1130 aa21.15■□□□□ 0.98
RAB11FIP3-209ENST00000483002 GMLQ99445 158 aa21.15■□□□□ 0.98
RAB11FIP3-209ENST00000483002 PLA2G12BQ9BX93 195 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms