RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 ZC3H12CQ9C0D7 883 aaKnown RBP17.59■□□□□ 0.41
VARS-225ENST00000482996 BSDC1Q9NW68 430 aaPredicted RBP17.59■□□□□ 0.41
VARS-225ENST00000482996 C9orf78Q9NZ63 289 aaPredicted RBP17.59■□□□□ 0.41
VARS-225ENST00000482996 CLEC11AQ9Y240 323 aa17.59■□□□□ 0.41
VARS-225ENST00000482996 GRM8O00222 908 aa17.58■□□□□ 0.4
VARS-225ENST00000482996 RAD17O75943 681 aa17.58■□□□□ 0.4
VARS-225ENST00000482996 CSF1RP07333 972 aa17.58■□□□□ 0.4
VARS-225ENST00000482996 POTEIP0CG38 1075 aa17.58■□□□□ 0.4
VARS-225ENST00000482996 POTEJP0CG39 1038 aa17.58■□□□□ 0.4
VARS-225ENST00000482996 ALDH1L2Q3SY69 923 aa17.58■□□□□ 0.4
VARS-225ENST00000482996 G3V3G9 751 aa17.57■□□□□ 0.4
VARS-225ENST00000482996 ITGA6P23229 1130 aa17.57■□□□□ 0.4
VARS-225ENST00000482996 ATP2B4P23634 1241 aa17.57■□□□□ 0.4
VARS-225ENST00000482996 SCNN1DP51172 638 aa17.57■□□□□ 0.4
VARS-225ENST00000482996 FAM161AQ3B820 660 aa17.57■□□□□ 0.4
VARS-225ENST00000482996 DCAF8Q5TAQ9 597 aa17.57■□□□□ 0.4
VARS-225ENST00000482996 BCL2L13Q9BXK5 485 aa17.57■□□□□ 0.4
VARS-225ENST00000482996 DBNDD1Q9H9R9 158 aa17.57■□□□□ 0.4
VARS-225ENST00000482996 SMC4Q9NTJ3 1288 aa17.57■□□□□ 0.4
VARS-225ENST00000482996 ANKRD18BA2A2Z9 1011 aa17.56■□□□□ 0.4
VARS-225ENST00000482996 YDJCA8MPS7 323 aa17.56■□□□□ 0.4
VARS-225ENST00000482996 EPS15P42566 896 aa17.56■□□□□ 0.4
VARS-225ENST00000482996 GMPSP49915 693 aaPredicted RBP17.56■□□□□ 0.4
VARS-225ENST00000482996 GPR101Q96P66 508 aaPredicted RBP17.56■□□□□ 0.4
VARS-225ENST00000482996 MPHOSPH8Q99549 860 aa17.56■□□□□ 0.4
VARS-225ENST00000482996 MINPP1Q9UNW1 487 aa17.56■□□□□ 0.4
VARS-225ENST00000482996 CHMP3Q9Y3E7 222 aa17.56■□□□□ 0.4
VARS-225ENST00000482996 ECE2O60344 883 aa17.55■□□□□ 0.4
VARS-225ENST00000482996 DOK7Q18PE1 504 aa17.55■□□□□ 0.4
VARS-225ENST00000482996 GPRC5DQ9NZD1 345 aa17.55■□□□□ 0.4
VARS-225ENST00000482996 LTBP1Q14766 1721 aa17.55■□□□□ 0.4
VARS-225ENST00000482996 FOXO4P98177 505 aa17.54■□□□□ 0.4
VARS-225ENST00000482996 IFIT5Q13325 482 aaKnown RBP17.54■□□□□ 0.4
VARS-225ENST00000482996 USP50Q70EL3 339 aaPredicted RBP17.54■□□□□ 0.4
VARS-225ENST00000482996 ANKRD2Q9GZV1 360 aa17.54■□□□□ 0.4
VARS-225ENST00000482996 ADARB2Q9NS39 739 aaKnown RBP17.54■□□□□ 0.4
VARS-225ENST00000482996 HTRA3P83110 453 aa17.53■□□□□ 0.4
VARS-225ENST00000482996 LMBR1LQ6UX01 489 aa17.53■□□□□ 0.4
VARS-225ENST00000482996 PSMD14O00487 310 aa17.52■□□□□ 0.4
VARS-225ENST00000482996 CCT4P50991 539 aaKnown RBP17.52■□□□□ 0.4
VARS-225ENST00000482996 CCDC57Q2TAC2 916 aa17.52■□□□□ 0.4
VARS-225ENST00000482996 TAF7LQ5H9L4 462 aa17.52■□□□□ 0.4
VARS-225ENST00000482996 LEMD3Q9Y2U8 911 aa17.52■□□□□ 0.4
VARS-225ENST00000482996 H7C1D1 291 aa17.51■□□□□ 0.39
VARS-225ENST00000482996 RPS12P25398 132 aaKnown RBP17.51■□□□□ 0.39
VARS-225ENST00000482996 HNRNPUQ00839 825 aaKnown RBP eCLIP17.51■□□□□ 0.39
VARS-225ENST00000482996 EPHA10Q5JZY3 1008 aa17.51■□□□□ 0.39
VARS-225ENST00000482996 MAP1SQ66K74 1059 aaPredicted RBP17.51■□□□□ 0.39
VARS-225ENST00000482996 CNTROBQ8N137 903 aa17.51■□□□□ 0.39
VARS-225ENST00000482996 DNAJC5GQ8N7S2 189 aa17.51■□□□□ 0.39
VARS-225ENST00000482996 DPF2Q92785 391 aa17.51■□□□□ 0.39
VARS-225ENST00000482996 KCNJ4P48050 445 aa17.5■□□□□ 0.39
VARS-225ENST00000482996 KLRG1Q96E93 195 aa17.5■□□□□ 0.39
VARS-225ENST00000482996 SUCLG2Q96I99 432 aa17.5■□□□□ 0.39
VARS-225ENST00000482996 CNOT7Q9UIV1 285 aaKnown RBP17.5■□□□□ 0.39
VARS-225ENST00000482996 MED23Q9ULK4 1368 aa17.5■□□□□ 0.39
VARS-225ENST00000482996 UTYO14607 1347 aa17.49■□□□□ 0.39
VARS-225ENST00000482996 PASKQ96RG2 1323 aa17.49■□□□□ 0.39
VARS-225ENST00000482996 SPEF2Q9C093 1822 aa17.49■□□□□ 0.39
VARS-225ENST00000482996 ADAMTSL1Q8N6G6 1762 aa17.49■□□□□ 0.39
VARS-225ENST00000482996 ITGBL1O95965 494 aaPredicted RBP17.49■□□□□ 0.39
VARS-225ENST00000482996 NBPF7P0C2Y1 421 aaPredicted RBP17.49■□□□□ 0.39
VARS-225ENST00000482996 PODNQ7Z5L7 613 aa17.49■□□□□ 0.39
VARS-225ENST00000482996 MICALL2Q8IY33 904 aa17.49■□□□□ 0.39
VARS-225ENST00000482996 KCNQ5Q9NR82 932 aa17.49■□□□□ 0.39
VARS-225ENST00000482996 CREBZFQ9NS37 354 aa17.49■□□□□ 0.39
VARS-225ENST00000482996 ZBTB12Q9Y330 459 aaPredicted RBP17.49■□□□□ 0.39
VARS-225ENST00000482996 ZNF804BA4D1E1 1349 aa17.48■□□□□ 0.39
VARS-225ENST00000482996 VIL1P09327 827 aaKnown RBP17.48■□□□□ 0.39
VARS-225ENST00000482996 RARSP54136 660 aaKnown RBP17.48■□□□□ 0.39
VARS-225ENST00000482996 BRPF1P55201 1214 aaPredicted RBP17.48■□□□□ 0.39
VARS-225ENST00000482996 CHRNDQ07001 517 aa17.48■□□□□ 0.39
VARS-225ENST00000482996 API5Q9BZZ5 524 aaKnown RBP17.48■□□□□ 0.39
VARS-225ENST00000482996 NOB1Q9ULX3 412 aaKnown RBP17.48■□□□□ 0.39
VARS-225ENST00000482996 LDHAL6AQ6ZMR3 332 aa17.47■□□□□ 0.39
VARS-225ENST00000482996 CNNM1Q9NRU3 951 aa17.47■□□□□ 0.39
VARS-225ENST00000482996 KIF16BQ96L93 1317 aa17.47■□□□□ 0.39
VARS-225ENST00000482996 USP17L3A6NCW0 530 aa17.46■□□□□ 0.39
VARS-225ENST00000482996 USP17L4A6NCW7 530 aa17.46■□□□□ 0.39
VARS-225ENST00000482996 WTIPA6NIX2 430 aaPredicted RBP17.46■□□□□ 0.39
VARS-225ENST00000482996 USP17L1Q7RTZ2 530 aa17.46■□□□□ 0.39
VARS-225ENST00000482996 ZC3H15Q8WU90 426 aaKnown RBP17.46■□□□□ 0.39
VARS-225ENST00000482996 KAZALD1Q96I82 304 aa17.46■□□□□ 0.39
VARS-225ENST00000482996 ZNF594Q96JF6 807 aaPredicted RBP17.46■□□□□ 0.39
VARS-225ENST00000482996 COA1Q9GZY4 146 aa17.46■□□□□ 0.39
VARS-225ENST00000482996 BICC1Q9H694 974 aaKnown RBP17.46■□□□□ 0.39
VARS-225ENST00000482996 TMEM88BA6NKF7 163 aa17.45■□□□□ 0.38
VARS-225ENST00000482996 RSBN1LQ6PCB5 846 aaPredicted RBP17.45■□□□□ 0.38
VARS-225ENST00000482996 AGBL3Q8NEM8 1001 aa17.45■□□□□ 0.38
VARS-225ENST00000482996 TRPM4Q8TD43 1214 aa17.45■□□□□ 0.38
VARS-225ENST00000482996 USP44Q9H0E7 712 aa17.45■□□□□ 0.38
VARS-225ENST00000482996 SHTN1A0MZ66 631 aa17.44■□□□□ 0.38
VARS-225ENST00000482996 TAF5LO75529 589 aa17.44■□□□□ 0.38
VARS-225ENST00000482996 RABL6Q3YEC7 729 aaPredicted RBP17.44■□□□□ 0.38
VARS-225ENST00000482996 HELBQ8NG08 1087 aaPredicted RBP17.44■□□□□ 0.38
VARS-225ENST00000482996 SCN9AQ15858 1988 aa17.44■□□□□ 0.38
VARS-225ENST00000482996 HIRAP54198 1017 aaPredicted RBP17.43■□□□□ 0.38
VARS-225ENST00000482996 TBC1D10BQ4KMP7 808 aaPredicted RBP17.43■□□□□ 0.38
VARS-225ENST00000482996 SAMD7Q7Z3H4 446 aa17.43■□□□□ 0.38
VARS-225ENST00000482996 TXNRD3Q86VQ6 643 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 1622 ms