RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 MEIS3Q99687 375 aa26.22■■□□□ 1.79
SEC13-217ENST00000482647 POLLQ9UGP5 575 aa26.22■■□□□ 1.79
SEC13-217ENST00000482647 GGA1Q9UJY5 639 aa26.22■■□□□ 1.79
SEC13-217ENST00000482647 XDHP47989 1333 aa26.21■■□□□ 1.79
SEC13-217ENST00000482647 AOC3Q16853 763 aa26.21■■□□□ 1.79
SEC13-217ENST00000482647 WASHC4Q2M389 1173 aa26.21■■□□□ 1.79
SEC13-217ENST00000482647 EYA3Q99504 573 aa26.21■■□□□ 1.79
SEC13-217ENST00000482647 ANKRD2Q9GZV1 360 aa26.21■■□□□ 1.79
SEC13-217ENST00000482647 GLTPD2A6NH11 291 aa26.2■■□□□ 1.78
SEC13-217ENST00000482647 KIAA2012Q0VF49 1180 aa26.2■■□□□ 1.78
SEC13-217ENST00000482647 NIM1KQ8IY84 436 aa26.2■■□□□ 1.78
SEC13-217ENST00000482647 UFL1O94874 794 aa26.19■■□□□ 1.78
SEC13-217ENST00000482647 ATP2B4P23634 1241 aa26.19■■□□□ 1.78
SEC13-217ENST00000482647 LDHAL6AQ6ZMR3 332 aa26.19■■□□□ 1.78
SEC13-217ENST00000482647 ZNF594Q96JF6 807 aaPredicted RBP26.19■■□□□ 1.78
SEC13-217ENST00000482647 LRRFIP2Q9Y608 721 aaKnown RBP26.19■■□□□ 1.78
SEC13-217ENST00000482647 LRRC37AA6NMS7 1700 aa26.18■■□□□ 1.78
SEC13-217ENST00000482647 FZD9O00144 591 aa26.18■■□□□ 1.78
SEC13-217ENST00000482647 RLBP1P12271 317 aa26.18■■□□□ 1.78
SEC13-217ENST00000482647 ITPRIPQ8IWB1 547 aa26.17■■□□□ 1.78
SEC13-217ENST00000482647 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.17■■□□□ 1.78
SEC13-217ENST00000482647 ZC3H12CQ9C0D7 883 aaKnown RBP26.17■■□□□ 1.78
SEC13-217ENST00000482647 CNNM1Q9NRU3 951 aa26.17■■□□□ 1.78
SEC13-217ENST00000482647 RIMBP2O15034 1052 aa26.16■■□□□ 1.78
SEC13-217ENST00000482647 EIF6P56537 245 aaKnown RBP26.16■■□□□ 1.78
SEC13-217ENST00000482647 ZNRF3Q9ULT6 936 aa26.16■■□□□ 1.78
SEC13-217ENST00000482647 LEMD3Q9Y2U8 911 aa26.16■■□□□ 1.78
SEC13-217ENST00000482647 GNAI2P04899 355 aa26.15■■□□□ 1.78
SEC13-217ENST00000482647 CHRNDQ07001 517 aa26.15■■□□□ 1.78
SEC13-217ENST00000482647 PANK1Q8TE04 598 aa26.15■■□□□ 1.78
SEC13-217ENST00000482647 PLIN1O60240 522 aa26.14■■□□□ 1.78
SEC13-217ENST00000482647 CCDC88AQ3V6T2 1871 aa26.13■■□□□ 1.77
SEC13-217ENST00000482647 DUOX1Q9NRD9 1551 aa26.13■■□□□ 1.77
SEC13-217ENST00000482647 GPR101Q96P66 508 aaPredicted RBP26.13■■□□□ 1.77
SEC13-217ENST00000482647 ZNF541Q9H0D2 1346 aa26.13■■□□□ 1.77
SEC13-217ENST00000482647 DDNO94850 711 aaPredicted RBP26.12■■□□□ 1.77
SEC13-217ENST00000482647 KCNJ4P48050 445 aa26.12■■□□□ 1.77
SEC13-217ENST00000482647 DICER1Q9UPY3 1922 aaKnown RBP26.12■■□□□ 1.77
SEC13-217ENST00000482647 ZNF804BA4D1E1 1349 aa26.12■■□□□ 1.77
SEC13-217ENST00000482647 G3V3G9 751 aa26.11■■□□□ 1.77
SEC13-217ENST00000482647 ZBTB7BO15156 539 aaPredicted RBP26.11■■□□□ 1.77
SEC13-217ENST00000482647 DCAF8Q5TAQ9 597 aa26.11■■□□□ 1.77
SEC13-217ENST00000482647 GPC2Q8N158 579 aa26.11■■□□□ 1.77
SEC13-217ENST00000482647 NMRK2Q9NPI5 230 aa26.11■■□□□ 1.77
SEC13-217ENST00000482647 COL4A5P29400 1685 aa26.1■■□□□ 1.77
SEC13-217ENST00000482647 TAF5LO75529 589 aa26.1■■□□□ 1.77
SEC13-217ENST00000482647 RFX5P48382 616 aaPredicted RBP26.1■■□□□ 1.77
SEC13-217ENST00000482647 HELBQ8NG08 1087 aaPredicted RBP26.1■■□□□ 1.77
SEC13-217ENST00000482647 KLHDC4Q8TBB5 520 aa26.1■■□□□ 1.77
SEC13-217ENST00000482647 PUS3Q9BZE2 481 aaKnown RBP26.1■■□□□ 1.77
SEC13-217ENST00000482647 RRAGCQ9HB90 399 aa26.1■■□□□ 1.77
SEC13-217ENST00000482647 RIPOR2Q9Y4F9 1068 aa26.1■■□□□ 1.77
SEC13-217ENST00000482647 TIAM2Q8IVF5 1701 aa26.1■■□□□ 1.77
SEC13-217ENST00000482647 MROH5Q6ZUA9 1318 aa26.1■■□□□ 1.77
SEC13-217ENST00000482647 WTIPA6NIX2 430 aaPredicted RBP26.09■■□□□ 1.77
SEC13-217ENST00000482647 PDE3AQ14432 1141 aa26.09■■□□□ 1.77
SEC13-217ENST00000482647 DOK7Q18PE1 504 aa26.09■■□□□ 1.77
SEC13-217ENST00000482647 DBNDD1Q9H9R9 158 aa26.09■■□□□ 1.77
SEC13-217ENST00000482647 SRGAP3O43295 1099 aa26.08■■□□□ 1.77
SEC13-217ENST00000482647 VEGFAP15692 232 aaPredicted RBP26.08■■□□□ 1.77
SEC13-217ENST00000482647 PTPN12Q05209 780 aaKnown RBP26.08■■□□□ 1.77
SEC13-217ENST00000482647 CXCL9Q07325 125 aa26.08■■□□□ 1.77
SEC13-217ENST00000482647 MTX1Q13505 466 aa26.08■■□□□ 1.77
SEC13-217ENST00000482647 GJA3Q9Y6H8 435 aa26.08■■□□□ 1.77
SEC13-217ENST00000482647 LTBP1Q14766 1721 aa26.08■■□□□ 1.76
SEC13-217ENST00000482647 MED23Q9ULK4 1368 aa26.07■■□□□ 1.76
SEC13-217ENST00000482647 ECE2O60344 883 aa26.07■■□□□ 1.76
SEC13-217ENST00000482647 MVPQ14764 893 aaKnown RBP26.07■■□□□ 1.76
SEC13-217ENST00000482647 TNIP1Q15025 636 aa26.07■■□□□ 1.76
SEC13-217ENST00000482647 LRRC24Q50LG9 513 aa26.07■■□□□ 1.76
SEC13-217ENST00000482647 L3MBTL3Q96JM7 780 aaPredicted RBP26.07■■□□□ 1.76
SEC13-217ENST00000482647 YDJCA8MPS7 323 aa26.06■■□□□ 1.76
SEC13-217ENST00000482647 EYA2O00167 538 aa26.06■■□□□ 1.76
SEC13-217ENST00000482647 METTL24Q5JXM2 366 aa26.06■■□□□ 1.76
SEC13-217ENST00000482647 CIAPIN1Q6FI81 312 aa26.06■■□□□ 1.76
SEC13-217ENST00000482647 FBXO3Q9UK99 471 aa26.06■■□□□ 1.76
SEC13-217ENST00000482647 DDX19BQ9UMR2 479 aa26.06■■□□□ 1.76
SEC13-217ENST00000482647 COG6Q9Y2V7 657 aa26.06■■□□□ 1.76
SEC13-217ENST00000482647 KIF3CO14782 793 aa26.05■■□□□ 1.76
SEC13-217ENST00000482647 RAD17O75943 681 aa26.05■■□□□ 1.76
SEC13-217ENST00000482647 CHMP4BQ9H444 224 aaKnown RBP26.05■■□□□ 1.76
SEC13-217ENST00000482647 IQCA1LA6NCM1 817 aa26.04■■□□□ 1.76
SEC13-217ENST00000482647 PODNQ7Z5L7 613 aa26.04■■□□□ 1.76
SEC13-217ENST00000482647 COPRSQ9NQ92 184 aa26.04■■□□□ 1.76
SEC13-217ENST00000482647 SPEF2Q9C093 1822 aa26.03■■□□□ 1.76
SEC13-217ENST00000482647 POTECB2RU33 542 aa26.03■■□□□ 1.76
SEC13-217ENST00000482647 SNAP23O00161 211 aa26.03■■□□□ 1.76
SEC13-217ENST00000482647 CIAO1O76071 339 aa26.03■■□□□ 1.76
SEC13-217ENST00000482647 UBE4AQ14139 1066 aa26.03■■□□□ 1.76
SEC13-217ENST00000482647 C15orf52Q6ZUT6 534 aaKnown RBP26.03■■□□□ 1.76
SEC13-217ENST00000482647 C16orf71Q8IYS4 520 aaPredicted RBP26.03■■□□□ 1.76
SEC13-217ENST00000482647 COA1Q9GZY4 146 aa26.03■■□□□ 1.76
SEC13-217ENST00000482647 SIL1Q9H173 461 aa26.03■■□□□ 1.76
SEC13-217ENST00000482647 C20orf194Q5TEA3 1177 aa26.02■■□□□ 1.76
SEC13-217ENST00000482647 TXNRD3Q86VQ6 643 aa26.02■■□□□ 1.76
SEC13-217ENST00000482647 C1orf115Q9H7X2 142 aa26.02■■□□□ 1.76
SEC13-217ENST00000482647 PDE8BO95263 885 aa26.01■■□□□ 1.75
SEC13-217ENST00000482647 KLRK1P26718 216 aa26.01■■□□□ 1.75
SEC13-217ENST00000482647 ATP8B2P98198 1209 aa26.01■■□□□ 1.75
SEC13-217ENST00000482647 ATG9AQ7Z3C6 839 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms