RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 TMED1Q13445 227 aa11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 PLCB4Q15147 1175 aa11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 CCDC144BQ3MJ40 725 aa11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 MFSD4BQ5TF39 518 aa11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 ARMC3Q5W041 872 aa11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 TTLL7Q6ZT98 887 aa11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 CCDC144CPQ8IYA2 1237 aa11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 SPDL1Q96EA4 605 aa11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 CARD11Q9BXL7 1154 aa11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 TRIM7Q9C029 511 aa11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 KDM2AQ9Y2K7 1162 aa11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 ST20-MTHFSA0A0A6YYL1 179 aa11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 SHOX2O60902 331 aaPredicted RBP11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 MYL1P05976 194 aa11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 CHGAP10645 457 aaKnown RBP11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 NAT1P18440 290 aa11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 EVCP57679 992 aa11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 G3BP1Q13283 466 aaKnown RBP eCLIP11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 DBN1Q16643 649 aa11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 FAM177A1Q8N128 213 aaPredicted RBP11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 SNRNP27Q8WVK2 155 aaKnown RBP11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 FAN1Q9Y2M0 1017 aa11.92□□□□□ -0.5
PRPF4B-206ENST00000481109 DEUP1Q05D60 604 aa11.91□□□□□ -0.5
PRPF4B-206ENST00000481109 GIMAP6Q6P9H5 292 aa11.91□□□□□ -0.5
PRPF4B-206ENST00000481109 MIPOL1Q8TD10 442 aa11.91□□□□□ -0.5
PRPF4B-206ENST00000481109 LMBR1Q8WVP7 490 aa11.91□□□□□ -0.5
PRPF4B-206ENST00000481109 RBM17Q96I25 401 aaKnown RBP11.91□□□□□ -0.5
PRPF4B-206ENST00000481109 PDE11AQ9HCR9 933 aa11.91□□□□□ -0.5
PRPF4B-206ENST00000481109 RTL1A6NKG5 1358 aa11.91□□□□□ -0.5
PRPF4B-206ENST00000481109 COL17A1Q9UMD9 1497 aaPredicted RBP11.91□□□□□ -0.5
PRPF4B-206ENST00000481109 HNRNPMP52272 730 aaKnown RBP eCLIP11.91□□□□□ -0.5
PRPF4B-206ENST00000481109 SMTNP53814 917 aa11.91□□□□□ -0.5
PRPF4B-206ENST00000481109 CWF19L1Q69YN2 538 aaKnown RBP11.91□□□□□ -0.5
PRPF4B-206ENST00000481109 RSRC2Q7L4I2 434 aaKnown RBP11.91□□□□□ -0.5
PRPF4B-206ENST00000481109 BICC1Q9H694 974 aaKnown RBP11.91□□□□□ -0.5
PRPF4B-206ENST00000481109 DDX19BQ9UMR2 479 aa11.91□□□□□ -0.5
PRPF4B-206ENST00000481109 USP5P45974 858 aa11.9□□□□□ -0.5
PRPF4B-206ENST00000481109 GCLCP48506 637 aaPredicted RBP11.9□□□□□ -0.5
PRPF4B-206ENST00000481109 GSDMDP57764 484 aa11.9□□□□□ -0.5
PRPF4B-206ENST00000481109 NAA25Q14CX7 972 aa11.9□□□□□ -0.5
PRPF4B-206ENST00000481109 HOOK2Q96ED9 719 aa11.9□□□□□ -0.5
PRPF4B-206ENST00000481109 YIPF2Q9BWQ6 316 aa11.9□□□□□ -0.5
PRPF4B-206ENST00000481109 TSGA10Q9BZW7 698 aa11.9□□□□□ -0.5
PRPF4B-206ENST00000481109 NUP155O75694 1391 aa11.9□□□□□ -0.5
PRPF4B-206ENST00000481109 ETF1P62495 437 aaKnown RBP11.9□□□□□ -0.51
PRPF4B-206ENST00000481109 KCNB1Q14721 858 aa11.9□□□□□ -0.51
PRPF4B-206ENST00000481109 CEP85LQ5SZL2 805 aa11.9□□□□□ -0.51
PRPF4B-206ENST00000481109 VPS53Q5VIR6 699 aa11.9□□□□□ -0.51
PRPF4B-206ENST00000481109 KLC4Q9NSK0 619 aa11.9□□□□□ -0.51
PRPF4B-206ENST00000481109 UTP6Q9NYH9 597 aaKnown RBP11.9□□□□□ -0.51
PRPF4B-206ENST00000481109 CAPN7Q9Y6W3 813 aa11.9□□□□□ -0.51
PRPF4B-206ENST00000481109 ERCC6Q03468 1493 aa11.89□□□□□ -0.51
PRPF4B-206ENST00000481109 MSH6P52701 1360 aa11.89□□□□□ -0.51
PRPF4B-206ENST00000481109 SPDYE3A6NKU9 549 aa11.89□□□□□ -0.51
PRPF4B-206ENST00000481109 FCHSD2O94868 740 aa11.89□□□□□ -0.51
PRPF4B-206ENST00000481109 PEX19P40855 299 aa11.89□□□□□ -0.51
PRPF4B-206ENST00000481109 ROR2Q01974 943 aaKnown RBP11.89□□□□□ -0.51
PRPF4B-206ENST00000481109 SLC30A9Q6PML9 568 aa11.89□□□□□ -0.51
PRPF4B-206ENST00000481109 ZFAND2BQ8WV99 257 aa11.89□□□□□ -0.51
PRPF4B-206ENST00000481109 RSRC1Q96IZ7 334 aaKnown RBP11.89□□□□□ -0.51
PRPF4B-206ENST00000481109 PPP1R13BQ96KQ4 1090 aa11.89□□□□□ -0.51
PRPF4B-206ENST00000481109 PARD6BQ9BYG5 372 aa11.89□□□□□ -0.51
PRPF4B-206ENST00000481109 ERICH2A1L162 156 aa11.89□□□□□ -0.51
PRPF4B-206ENST00000481109 CCDC69A6NI79 296 aa11.89□□□□□ -0.51
PRPF4B-206ENST00000481109 POTEB2H3BUK9 544 aa11.89□□□□□ -0.51
PRPF4B-206ENST00000481109 PPP2R1AP30153 589 aa11.89□□□□□ -0.51
PRPF4B-206ENST00000481109 CCDC15Q0P6D6 951 aa11.89□□□□□ -0.51
PRPF4B-206ENST00000481109 ARHGAP22Q7Z5H3 698 aa11.89□□□□□ -0.51
PRPF4B-206ENST00000481109 YTHDF3Q7Z739 585 aaKnown RBP11.89□□□□□ -0.51
PRPF4B-206ENST00000481109 DZIP1LQ8IYY4 767 aaKnown RBP11.89□□□□□ -0.51
PRPF4B-206ENST00000481109 ALS2CR12Q96Q35 445 aa11.89□□□□□ -0.51
PRPF4B-206ENST00000481109 TRMT1Q9NXH9 659 aaKnown RBP11.89□□□□□ -0.51
PRPF4B-206ENST00000481109 DDX20Q9UHI6 824 aaKnown RBP11.89□□□□□ -0.51
PRPF4B-206ENST00000481109 LIN7AO14910 233 aaPredicted RBP11.88□□□□□ -0.51
PRPF4B-206ENST00000481109 SLC8A1P32418 973 aa11.88□□□□□ -0.51
PRPF4B-206ENST00000481109 ARHGAP25P42331 645 aa11.88□□□□□ -0.51
PRPF4B-206ENST00000481109 ZBED6P86452 979 aa11.88□□□□□ -0.51
PRPF4B-206ENST00000481109 RRP12Q5JTH9 1297 aaKnown RBP11.88□□□□□ -0.51
PRPF4B-206ENST00000481109 ZCRB1Q8TBF4 217 aaKnown RBP11.88□□□□□ -0.51
PRPF4B-206ENST00000481109 FMNL2Q96PY5 1086 aa11.88□□□□□ -0.51
PRPF4B-206ENST00000481109 PRAM1Q96QH2 718 aa11.88□□□□□ -0.51
PRPF4B-206ENST00000481109 EPAS1Q99814 870 aa11.88□□□□□ -0.51
PRPF4B-206ENST00000481109 CBX8Q9HC52 389 aa11.88□□□□□ -0.51
PRPF4B-206ENST00000481109 RPGRIP1LQ68CZ1 1315 aa11.88□□□□□ -0.51
PRPF4B-206ENST00000481109 SYNJ2O15056 1496 aa11.88□□□□□ -0.51
PRPF4B-206ENST00000481109 APAF1O14727 1248 aa11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 RASSF9O75901 435 aa11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 CDR1P51861 262 aa11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 TUBB4BP68371 445 aa11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 TYRO3Q06418 890 aa11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 SF3B2Q13435 895 aaKnown RBP11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 SLMAPQ14BN4 828 aa11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 BEND6Q5SZJ8 279 aaPredicted RBP11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 ZKSCAN2Q63HK3 967 aa11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 ZNF280DQ6N043 979 aa11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 LUZP1Q86V48 1076 aa11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 CCDC170Q8IYT3 715 aa11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 DTNBP1Q96EV8 351 aa11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 MMADHCQ9H3L0 296 aaPredicted RBP11.87□□□□□ -0.51
PRPF4B-206ENST00000481109 PCDHGC5Q9Y5F6 944 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms