RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 TLL2Q9Y6L7 1015 aa24.25■■□□□ 1.47
ABCF3-214ENST00000480562 PI4KAP2A4QPH2 592 aa24.24■■□□□ 1.47
ABCF3-214ENST00000480562 KSR2Q6VAB6 950 aa24.24■■□□□ 1.47
ABCF3-214ENST00000480562 SAMD7Q7Z3H4 446 aa24.24■■□□□ 1.47
ABCF3-214ENST00000480562 PI4KAP1Q8N8J0 262 aa24.24■■□□□ 1.47
ABCF3-214ENST00000480562 ZC3H15Q8WU90 426 aaKnown RBP24.24■■□□□ 1.47
ABCF3-214ENST00000480562 DPF2Q92785 391 aa24.24■■□□□ 1.47
ABCF3-214ENST00000480562 ANKIB1Q9P2G1 1089 aa24.24■■□□□ 1.47
ABCF3-214ENST00000480562 UFL1O94874 794 aa24.23■■□□□ 1.47
ABCF3-214ENST00000480562 IGKV5-2P06315 115 aa24.23■■□□□ 1.47
ABCF3-214ENST00000480562 LBX1P52954 281 aa24.23■■□□□ 1.47
ABCF3-214ENST00000480562 CCDC27Q2M243 656 aa24.23■■□□□ 1.47
ABCF3-214ENST00000480562 ZNF408Q9H9D4 720 aa24.23■■□□□ 1.47
ABCF3-214ENST00000480562 PODXL2Q9NZ53 605 aa24.23■■□□□ 1.47
ABCF3-214ENST00000480562 RTL9Q8NET4 1388 aa24.23■■□□□ 1.47
ABCF3-214ENST00000480562 ECE1P42892 770 aa24.22■■□□□ 1.47
ABCF3-214ENST00000480562 MAP2K1Q02750 393 aaPredicted RBP24.22■■□□□ 1.47
ABCF3-214ENST00000480562 TBC1D10BQ4KMP7 808 aaPredicted RBP24.22■■□□□ 1.47
ABCF3-214ENST00000480562 STK31Q9BXU1 1019 aa24.22■■□□□ 1.47
ABCF3-214ENST00000480562 ZC3H12CQ9C0D7 883 aaKnown RBP24.22■■□□□ 1.47
ABCF3-214ENST00000480562 GGA1Q9UJY5 639 aa24.22■■□□□ 1.47
ABCF3-214ENST00000480562 TWISTNBQ3B726 338 aaPredicted RBP24.21■■□□□ 1.47
ABCF3-214ENST00000480562 CDC37L1Q7L3B6 337 aa24.21■■□□□ 1.47
ABCF3-214ENST00000480562 G2E3Q7L622 706 aa24.21■■□□□ 1.47
ABCF3-214ENST00000480562 USP48Q86UV5 1035 aa24.21■■□□□ 1.47
ABCF3-214ENST00000480562 EGFRP00533 1210 aa24.2■■□□□ 1.46
ABCF3-214ENST00000480562 HSPA8P11142 646 aaKnown RBP24.2■■□□□ 1.46
ABCF3-214ENST00000480562 RBM26Q5T8P6 1007 aaKnown RBP24.2■■□□□ 1.46
ABCF3-214ENST00000480562 DLK2Q6UY11 383 aa24.2■■□□□ 1.46
ABCF3-214ENST00000480562 SAPCD2Q86UD0 394 aa24.2■■□□□ 1.46
ABCF3-214ENST00000480562 MRS2Q9HD23 443 aa24.2■■□□□ 1.46
ABCF3-214ENST00000480562 G3V3G9 751 aa24.19■■□□□ 1.46
ABCF3-214ENST00000480562 AOC2O75106 756 aa24.19■■□□□ 1.46
ABCF3-214ENST00000480562 RPS12P25398 132 aaKnown RBP24.19■■□□□ 1.46
ABCF3-214ENST00000480562 CTSWP56202 376 aa24.19■■□□□ 1.46
ABCF3-214ENST00000480562 CWF19L2Q2TBE0 894 aaKnown RBP24.19■■□□□ 1.46
ABCF3-214ENST00000480562 DCAF8Q5TAQ9 597 aa24.19■■□□□ 1.46
ABCF3-214ENST00000480562 ANKRD18AQ8IVF6 992 aa24.19■■□□□ 1.46
ABCF3-214ENST00000480562 SCN9AQ15858 1988 aa24.18■■□□□ 1.46
ABCF3-214ENST00000480562 SLC4A2P04920 1241 aa24.18■■□□□ 1.46
ABCF3-214ENST00000480562 NEXNQ0ZGT2 675 aa24.18■■□□□ 1.46
ABCF3-214ENST00000480562 THSD7BQ9C0I4 1608 aa24.17■■□□□ 1.46
ABCF3-214ENST00000480562 IL16Q14005 1332 aa24.17■■□□□ 1.46
ABCF3-214ENST00000480562 SALL2Q9Y467 1007 aaPredicted RBP24.17■■□□□ 1.46
ABCF3-214ENST00000480562 XDHP47989 1333 aa24.16■■□□□ 1.46
ABCF3-214ENST00000480562 NEURL1BA8MQ27 555 aa24.16■■□□□ 1.46
ABCF3-214ENST00000480562 VIL1P09327 827 aaKnown RBP24.16■■□□□ 1.46
ABCF3-214ENST00000480562 TTLL11Q8NHH1 800 aa24.16■■□□□ 1.46
ABCF3-214ENST00000480562 GREM2Q9H772 168 aa24.16■■□□□ 1.46
ABCF3-214ENST00000480562 CDC5LQ99459 802 aaKnown RBP24.15■■□□□ 1.46
ABCF3-214ENST00000480562 FANCIQ9NVI1 1328 aa24.14■■□□□ 1.46
ABCF3-214ENST00000480562 WTIPA6NIX2 430 aaPredicted RBP24.14■■□□□ 1.45
ABCF3-214ENST00000480562 UBE3BQ7Z3V4 1068 aa24.14■■□□□ 1.45
ABCF3-214ENST00000480562 KRT26Q7Z3Y9 468 aa24.14■■□□□ 1.45
ABCF3-214ENST00000480562 BEGAINQ9BUH8 593 aa24.14■■□□□ 1.45
ABCF3-214ENST00000480562 ADM5C9JUS6 153 aa24.13■■□□□ 1.45
ABCF3-214ENST00000480562 ANP32CO43423 234 aa24.13■■□□□ 1.45
ABCF3-214ENST00000480562 ATP2B4P23634 1241 aa24.13■■□□□ 1.45
ABCF3-214ENST00000480562 KIF4BQ2VIQ3 1234 aa24.13■■□□□ 1.45
ABCF3-214ENST00000480562 DCPSQ96C86 337 aaKnown RBP24.13■■□□□ 1.45
ABCF3-214ENST00000480562 H7C1W4 665 aa24.12■■□□□ 1.45
ABCF3-214ENST00000480562 MAP2K2P36507 400 aa24.12■■□□□ 1.45
ABCF3-214ENST00000480562 FLIIQ13045 1269 aa24.12■■□□□ 1.45
ABCF3-214ENST00000480562 NCBP3Q53F19 620 aaKnown RBP24.12■■□□□ 1.45
ABCF3-214ENST00000480562 HHIPL1Q96JK4 782 aa24.12■■□□□ 1.45
ABCF3-214ENST00000480562 ASTN2O75129 1339 aaPredicted RBP24.11■■□□□ 1.45
ABCF3-214ENST00000480562 POLR2AP24928 1970 aaKnown RBP24.11■■□□□ 1.45
ABCF3-214ENST00000480562 ZEB1P37275 1124 aaPredicted RBP24.11■■□□□ 1.45
ABCF3-214ENST00000480562 RSBN1LQ6PCB5 846 aaPredicted RBP24.11■■□□□ 1.45
ABCF3-214ENST00000480562 BSDC1Q9NW68 430 aaPredicted RBP24.11■■□□□ 1.45
ABCF3-214ENST00000480562 TSKSQ9UJT2 592 aa24.11■■□□□ 1.45
ABCF3-214ENST00000480562 MINPP1Q9UNW1 487 aa24.11■■□□□ 1.45
ABCF3-214ENST00000480562 SPEF2Q9C093 1822 aa24.1■■□□□ 1.45
ABCF3-214ENST00000480562 MYH3P11055 1940 aa24.1■■□□□ 1.45
ABCF3-214ENST00000480562 ZNF316A6NFI3 1004 aaPredicted RBP24.1■■□□□ 1.45
ABCF3-214ENST00000480562 HUNKP57058 714 aa24.1■■□□□ 1.45
ABCF3-214ENST00000480562 FKBP5Q13451 457 aaPredicted RBP24.1■■□□□ 1.45
ABCF3-214ENST00000480562 GCKRQ14397 625 aa24.1■■□□□ 1.45
ABCF3-214ENST00000480562 WDR63Q8IWG1 891 aa24.09■■□□□ 1.45
ABCF3-214ENST00000480562 AGBL3Q8NEM8 1001 aa24.09■■□□□ 1.45
ABCF3-214ENST00000480562 GGA3Q9NZ52 723 aa24.09■■□□□ 1.45
ABCF3-214ENST00000480562 VAMP4O75379 141 aa24.08■■□□□ 1.45
ABCF3-214ENST00000480562 ZNF280AP59817 542 aaPredicted RBP24.08■■□□□ 1.45
ABCF3-214ENST00000480562 EXOSC9Q06265 439 aaKnown RBP24.08■■□□□ 1.45
ABCF3-214ENST00000480562 DNAAF4Q8WXU2 420 aa24.08■■□□□ 1.45
ABCF3-214ENST00000480562 USP17L3A6NCW0 530 aa24.07■■□□□ 1.44
ABCF3-214ENST00000480562 USP17L4A6NCW7 530 aa24.07■■□□□ 1.44
ABCF3-214ENST00000480562 USP17L1Q7RTZ2 530 aa24.07■■□□□ 1.44
ABCF3-214ENST00000480562 PODNQ7Z5L7 613 aa24.07■■□□□ 1.44
ABCF3-214ENST00000480562 ZIC5Q96T25 663 aa24.07■■□□□ 1.44
ABCF3-214ENST00000480562 GMLQ99445 158 aa24.07■■□□□ 1.44
ABCF3-214ENST00000480562 GBA2Q9HCG7 927 aaPredicted RBP24.07■■□□□ 1.44
ABCF3-214ENST00000480562 MED23Q9ULK4 1368 aa24.06■■□□□ 1.44
ABCF3-214ENST00000480562 IGHMBP2P38935 993 aaKnown RBP24.06■■□□□ 1.44
ABCF3-214ENST00000480562 CCT4P50991 539 aaKnown RBP24.06■■□□□ 1.44
ABCF3-214ENST00000480562 CASP7P55210 303 aa24.06■■□□□ 1.44
ABCF3-214ENST00000480562 SCARF1Q14162 830 aa24.06■■□□□ 1.44
ABCF3-214ENST00000480562 FAM161AQ3B820 660 aa24.06■■□□□ 1.44
ABCF3-214ENST00000480562 SULF1Q8IWU6 871 aa24.06■■□□□ 1.44
ABCF3-214ENST00000480562 PLA2G12BQ9BX93 195 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms