RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 IL13P35225 146 aa6.6□□□□□ -1.35
PTCD3-213ENST00000480102 WDR4P57081 412 aaKnown RBP6.6□□□□□ -1.35
PTCD3-213ENST00000480102 RALBP1Q15311 655 aa6.6□□□□□ -1.35
PTCD3-213ENST00000480102 SNRKQ9NRH2 765 aa6.6□□□□□ -1.35
PTCD3-213ENST00000480102 MEGF6O75095 1541 aa6.6□□□□□ -1.35
PTCD3-213ENST00000480102 RGPD3A6NKT7 1758 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-213ENST00000480102 RGPD4Q7Z3J3 1758 aa6.59□□□□□ -1.35
PTCD3-213ENST00000480102 ERVV-2B6SEH9 535 aa6.59□□□□□ -1.35
PTCD3-213ENST00000480102 APBB1O00213 710 aa6.59□□□□□ -1.35
PTCD3-213ENST00000480102 TRIM37O94972 964 aa6.59□□□□□ -1.35
PTCD3-213ENST00000480102 APBA3O96018 575 aa6.59□□□□□ -1.35
PTCD3-213ENST00000480102 BMP1P13497 986 aa6.59□□□□□ -1.35
PTCD3-213ENST00000480102 IFNL2Q8IZJ0 200 aa6.59□□□□□ -1.35
PTCD3-213ENST00000480102 NDUFB9Q9Y6M9 179 aa6.59□□□□□ -1.35
PTCD3-213ENST00000480102 CYP27B1O15528 508 aa6.58□□□□□ -1.36
PTCD3-213ENST00000480102 GPR37L1O60883 481 aa6.58□□□□□ -1.36
PTCD3-213ENST00000480102 ZIC2O95409 532 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-213ENST00000480102 FBLN1P23142 703 aa6.58□□□□□ -1.36
PTCD3-213ENST00000480102 MTHFSP49914 203 aa6.58□□□□□ -1.36
PTCD3-213ENST00000480102 PLEKHO1Q53GL0 409 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-213ENST00000480102 CCDC116Q8IYX3 515 aa6.58□□□□□ -1.36
PTCD3-213ENST00000480102 SMARCC1Q92922 1105 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-213ENST00000480102 ITPKCQ96DU7 683 aa6.58□□□□□ -1.36
PTCD3-213ENST00000480102 DCAF5Q96JK2 942 aa6.58□□□□□ -1.36
PTCD3-213ENST00000480102 COL3A1P02461 1466 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-213ENST00000480102 ZBTB7CA1YPR0 619 aa6.57□□□□□ -1.36
PTCD3-213ENST00000480102 ZBBXA8MT70 800 aa6.57□□□□□ -1.36
PTCD3-213ENST00000480102 DIAPH1O60610 1272 aaKnown RBP6.57□□□□□ -1.36
PTCD3-213ENST00000480102 PHKG2P15735 406 aa6.57□□□□□ -1.36
PTCD3-213ENST00000480102 NBPF20Q3BBV1 942 aa6.57□□□□□ -1.36
PTCD3-213ENST00000480102 TRIM46Q7Z4K8 759 aa6.57□□□□□ -1.36
PTCD3-213ENST00000480102 DEFB132Q7Z7B7 95 aa6.57□□□□□ -1.36
PTCD3-213ENST00000480102 TRIM47Q96LD4 638 aa6.57□□□□□ -1.36
PTCD3-213ENST00000480102 CFAP53Q96M91 514 aa6.57□□□□□ -1.36
PTCD3-213ENST00000480102 KCTD15Q96SI1 283 aaPredicted RBP6.57□□□□□ -1.36
PTCD3-213ENST00000480102 ZFAND3Q9H8U3 227 aa6.57□□□□□ -1.36
PTCD3-213ENST00000480102 SENP2Q9HC62 589 aa6.57□□□□□ -1.36
PTCD3-213ENST00000480102 NUDCQ9Y266 331 aa6.57□□□□□ -1.36
PTCD3-213ENST00000480102 RGPD1P0DJD0 1748 aa6.56□□□□□ -1.36
PTCD3-213ENST00000480102 KIF20BQ96Q89 1820 aa6.56□□□□□ -1.36
PTCD3-213ENST00000480102 HTATSF1O43719 755 aaKnown RBP6.56□□□□□ -1.36
PTCD3-213ENST00000480102 FBXO45P0C2W1 286 aa6.56□□□□□ -1.36
PTCD3-213ENST00000480102 TXNRD1Q16881 649 aa6.56□□□□□ -1.36
PTCD3-213ENST00000480102 DZIP3Q86Y13 1208 aaKnown RBP6.56□□□□□ -1.36
PTCD3-213ENST00000480102 SLC16A10Q8TF71 515 aa6.56□□□□□ -1.36
PTCD3-213ENST00000480102 KIFC2Q96AC6 838 aa6.56□□□□□ -1.36
PTCD3-213ENST00000480102 POLR3GLQ9BT43 218 aa6.56□□□□□ -1.36
PTCD3-213ENST00000480102 LTN1O94822 1766 aa6.55□□□□□ -1.36
PTCD3-213ENST00000480102 PPM1GO15355 546 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-213ENST00000480102 PPP2R1AP30153 589 aa6.55□□□□□ -1.36
PTCD3-213ENST00000480102 EZH2Q15910 746 aaKnown RBP6.55□□□□□ -1.36
PTCD3-213ENST00000480102 AKAP4Q5JQC9 854 aa6.55□□□□□ -1.36
PTCD3-213ENST00000480102 INTS6LQ5JSJ4 861 aaKnown RBP6.55□□□□□ -1.36
PTCD3-213ENST00000480102 MRPL14Q6P1L8 145 aaKnown RBP6.55□□□□□ -1.36
PTCD3-213ENST00000480102 FLAD1Q8NFF5 587 aa6.55□□□□□ -1.36
PTCD3-213ENST00000480102 DDX54Q8TDD1 881 aaKnown RBP6.55□□□□□ -1.36
PTCD3-213ENST00000480102 LTV1Q96GA3 475 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-213ENST00000480102 PNNQ9H307 717 aaKnown RBP6.55□□□□□ -1.36
PTCD3-213ENST00000480102 KCNQ2O43526 872 aa6.54□□□□□ -1.36
PTCD3-213ENST00000480102 SNRPBP14678 240 aaKnown RBP6.54□□□□□ -1.36
PTCD3-213ENST00000480102 DHX9Q08211 1270 aaKnown RBP6.54□□□□□ -1.36
PTCD3-213ENST00000480102 NR1H3Q13133 447 aa6.54□□□□□ -1.36
PTCD3-213ENST00000480102 CC2D1BQ5T0F9 858 aaKnown RBP6.54□□□□□ -1.36
PTCD3-213ENST00000480102 FAM182BQ5T319 152 aa6.54□□□□□ -1.36
PTCD3-213ENST00000480102 PPP1R26Q5T8A7 1209 aaPredicted RBP6.54□□□□□ -1.36
PTCD3-213ENST00000480102 MEIOBQ8N635 442 aa6.54□□□□□ -1.36
PTCD3-213ENST00000480102 GAS2L2Q8NHY3 880 aa6.54□□□□□ -1.36
PTCD3-213ENST00000480102 TBC1D2BQ9UPU7 963 aa6.54□□□□□ -1.36
PTCD3-213ENST00000480102 WNK3Q9BYP7 1800 aa6.54□□□□□ -1.36
PTCD3-213ENST00000480102 NHSQ6T4R5 1651 aa6.54□□□□□ -1.36
PTCD3-213ENST00000480102 CEMIPQ8WUJ3 1361 aa6.54□□□□□ -1.36
PTCD3-213ENST00000480102 PKD1L3Q7Z443 1732 aa6.53□□□□□ -1.36
PTCD3-213ENST00000480102 TNS1Q9HBL0 1735 aaKnown RBP6.53□□□□□ -1.36
PTCD3-213ENST00000480102 BRWD3Q6RI45 1802 aa6.53□□□□□ -1.36
PTCD3-213ENST00000480102 ESPNB1AK53 854 aa6.53□□□□□ -1.36
PTCD3-213ENST00000480102 TNNT2P45379 298 aaPredicted RBP6.53□□□□□ -1.36
PTCD3-213ENST00000480102 MCM6Q14566 821 aa6.53□□□□□ -1.36
PTCD3-213ENST00000480102 SLC15A2Q16348 729 aa6.53□□□□□ -1.36
PTCD3-213ENST00000480102 SULT6B1Q6IMI4 303 aa6.53□□□□□ -1.36
PTCD3-213ENST00000480102 ZNF775Q96BV0 537 aaPredicted RBP6.53□□□□□ -1.36
PTCD3-213ENST00000480102 ZFP42Q96MM3 310 aa6.53□□□□□ -1.36
PTCD3-213ENST00000480102 PGPEP1Q9NXJ5 209 aa6.53□□□□□ -1.36
PTCD3-213ENST00000480102 MAP3K5Q99683 1374 aa6.53□□□□□ -1.36
PTCD3-213ENST00000480102 MRC1P22897 1456 aa6.53□□□□□ -1.36
PTCD3-213ENST00000480102 SCARF1Q14162 830 aa6.52□□□□□ -1.37
PTCD3-213ENST00000480102 C1orf141Q5JVX7 400 aa6.52□□□□□ -1.37
PTCD3-213ENST00000480102 LINC00528Q8N1L1 170 aa6.52□□□□□ -1.37
PTCD3-213ENST00000480102 USHBP1Q8N6Y0 703 aa6.52□□□□□ -1.37
PTCD3-213ENST00000480102 PIGBQ92521 554 aa6.52□□□□□ -1.37
PTCD3-213ENST00000480102 PURBQ96QR8 312 aaKnown RBP6.52□□□□□ -1.37
PTCD3-213ENST00000480102 SLC52A2Q9HAB3 445 aa6.52□□□□□ -1.37
PTCD3-213ENST00000480102 PRM3Q9NNZ6 103 aa6.52□□□□□ -1.37
PTCD3-213ENST00000480102 BABAM1Q9NWV8 329 aa6.52□□□□□ -1.37
PTCD3-213ENST00000480102 TMOD3Q9NYL9 352 aa6.52□□□□□ -1.37
PTCD3-213ENST00000480102 PCDHB9Q9Y5E1 797 aa6.52□□□□□ -1.37
PTCD3-213ENST00000480102 PALLDQ8WX93 1383 aa6.52□□□□□ -1.37
PTCD3-213ENST00000480102 RREB1Q92766 1687 aa6.52□□□□□ -1.37
PTCD3-213ENST00000480102 MYBBP1AQ9BQG0 1328 aaKnown RBP6.51□□□□□ -1.37
PTCD3-213ENST00000480102 SSFA2P28290 1259 aa6.51□□□□□ -1.37
PTCD3-213ENST00000480102 ZNF530Q6P9A1 599 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms